Protein–RNA interactions for Protein: P05622

Pdgfrb, Platelet-derived growth factor receptor beta, mousemouse

Predictions only

Length 1,098 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfrbP05622 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PdgfrbP05622 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PdgfrbP05622 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PdgfrbP05622 Nespas-201ENSMUST00000143738 1083 ntBASIC18.74■□□□□ 0.59
PdgfrbP05622 Gm8495-201ENSMUST00000188740 694 ntBASIC18.74■□□□□ 0.59
PdgfrbP05622 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC18.74■□□□□ 0.59
PdgfrbP05622 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PdgfrbP05622 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PdgfrbP05622 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PdgfrbP05622 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PdgfrbP05622 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
PdgfrbP05622 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
PdgfrbP05622 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC18.74■□□□□ 0.59
PdgfrbP05622 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PdgfrbP05622 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PdgfrbP05622 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PdgfrbP05622 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PdgfrbP05622 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PdgfrbP05622 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PdgfrbP05622 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PdgfrbP05622 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PdgfrbP05622 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PdgfrbP05622 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC18.72■□□□□ 0.59
PdgfrbP05622 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.72■□□□□ 0.59
PdgfrbP05622 Gm10655-201ENSMUST00000098658 1397 ntBASIC18.72■□□□□ 0.59
PdgfrbP05622 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PdgfrbP05622 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.72■□□□□ 0.59
PdgfrbP05622 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC18.72■□□□□ 0.59
PdgfrbP05622 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PdgfrbP05622 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC18.72■□□□□ 0.59
PdgfrbP05622 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PdgfrbP05622 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PdgfrbP05622 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PdgfrbP05622 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PdgfrbP05622 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PdgfrbP05622 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC18.72■□□□□ 0.59
PdgfrbP05622 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PdgfrbP05622 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PdgfrbP05622 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
PdgfrbP05622 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PdgfrbP05622 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.71■□□□□ 0.59
PdgfrbP05622 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PdgfrbP05622 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PdgfrbP05622 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PdgfrbP05622 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PdgfrbP05622 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
PdgfrbP05622 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PdgfrbP05622 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.7■□□□□ 0.58
PdgfrbP05622 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PdgfrbP05622 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
PdgfrbP05622 AC131586.2-201ENSMUST00000228370 1512 ntBASIC18.7■□□□□ 0.58
PdgfrbP05622 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PdgfrbP05622 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC18.7■□□□□ 0.58
PdgfrbP05622 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PdgfrbP05622 Gm42569-201ENSMUST00000200539 472 ntBASIC18.7■□□□□ 0.58
PdgfrbP05622 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC18.7■□□□□ 0.58
PdgfrbP05622 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PdgfrbP05622 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PdgfrbP05622 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PdgfrbP05622 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PdgfrbP05622 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PdgfrbP05622 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PdgfrbP05622 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PdgfrbP05622 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PdgfrbP05622 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PdgfrbP05622 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
PdgfrbP05622 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PdgfrbP05622 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PdgfrbP05622 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
PdgfrbP05622 Gm10849-201ENSMUST00000100397 618 ntBASIC18.68■□□□□ 0.58
PdgfrbP05622 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
PdgfrbP05622 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
PdgfrbP05622 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
PdgfrbP05622 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PdgfrbP05622 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PdgfrbP05622 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
PdgfrbP05622 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PdgfrbP05622 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PdgfrbP05622 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PdgfrbP05622 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
PdgfrbP05622 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
PdgfrbP05622 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PdgfrbP05622 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PdgfrbP05622 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
PdgfrbP05622 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.67■□□□□ 0.58
PdgfrbP05622 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PdgfrbP05622 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PdgfrbP05622 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PdgfrbP05622 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
PdgfrbP05622 Gm7856-201ENSMUST00000117514 1493 ntBASIC18.66■□□□□ 0.58
PdgfrbP05622 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
PdgfrbP05622 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PdgfrbP05622 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC18.66■□□□□ 0.58
PdgfrbP05622 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PdgfrbP05622 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PdgfrbP05622 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PdgfrbP05622 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
PdgfrbP05622 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PdgfrbP05622 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PdgfrbP05622 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms