Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TcraP01849 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TcraP01849 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
TcraP01849 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TcraP01849 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TcraP01849 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
TcraP01849 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
TcraP01849 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
TcraP01849 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TcraP01849 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TcraP01849 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TcraP01849 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
TcraP01849 Gm5522-201ENSMUST00000189483 1242 ntBASIC13.53□□□□□ -0.24
TcraP01849 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TcraP01849 Gm7143-201ENSMUST00000222811 859 ntBASIC13.53□□□□□ -0.24
TcraP01849 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TcraP01849 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TcraP01849 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
TcraP01849 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
TcraP01849 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
TcraP01849 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TcraP01849 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TcraP01849 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC13.52□□□□□ -0.24
TcraP01849 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
TcraP01849 Gm37352-201ENSMUST00000193908 2181 ntBASIC13.52□□□□□ -0.24
TcraP01849 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
TcraP01849 AC123834.2-201ENSMUST00000224038 2340 ntBASIC13.52□□□□□ -0.24
TcraP01849 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
TcraP01849 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC13.52□□□□□ -0.24
TcraP01849 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC13.52□□□□□ -0.24
TcraP01849 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
TcraP01849 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
TcraP01849 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
TcraP01849 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TcraP01849 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
TcraP01849 AA386476-201ENSMUST00000098781 1665 ntBASIC13.52□□□□□ -0.25
TcraP01849 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC13.52□□□□□ -0.25
TcraP01849 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TcraP01849 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TcraP01849 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC13.52□□□□□ -0.25
TcraP01849 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TcraP01849 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
TcraP01849 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
TcraP01849 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC13.52□□□□□ -0.25
TcraP01849 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TcraP01849 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
TcraP01849 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TcraP01849 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TcraP01849 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TcraP01849 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TcraP01849 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TcraP01849 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
TcraP01849 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TcraP01849 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
TcraP01849 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
TcraP01849 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TcraP01849 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC13.51□□□□□ -0.25
TcraP01849 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TcraP01849 Gm15546-201ENSMUST00000122095 826 ntBASIC13.51□□□□□ -0.25
TcraP01849 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TcraP01849 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TcraP01849 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TcraP01849 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
TcraP01849 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TcraP01849 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC13.51□□□□□ -0.25
TcraP01849 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TcraP01849 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TcraP01849 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TcraP01849 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
TcraP01849 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TcraP01849 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
TcraP01849 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC13.5□□□□□ -0.25
TcraP01849 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TcraP01849 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
TcraP01849 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
TcraP01849 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TcraP01849 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TcraP01849 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TcraP01849 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TcraP01849 Gm5812-201ENSMUST00000061073 957 ntBASIC13.5□□□□□ -0.25
TcraP01849 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TcraP01849 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC13.5□□□□□ -0.25
TcraP01849 Gm15853-202ENSMUST00000195518 2041 ntBASIC13.5□□□□□ -0.25
TcraP01849 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TcraP01849 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TcraP01849 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
TcraP01849 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TcraP01849 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TcraP01849 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TcraP01849 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TcraP01849 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TcraP01849 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TcraP01849 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
TcraP01849 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
TcraP01849 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
TcraP01849 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
TcraP01849 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TcraP01849 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC13.49□□□□□ -0.25
TcraP01849 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC13.49□□□□□ -0.25
TcraP01849 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms