Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC24.36■■□□□ 1.49
ALDH1A1P00352 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC24.36■■□□□ 1.49
ALDH1A1P00352 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
ALDH1A1P00352 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC24.36■■□□□ 1.49
ALDH1A1P00352 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC24.36■■□□□ 1.49
ALDH1A1P00352 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC24.36■■□□□ 1.49
ALDH1A1P00352 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
ALDH1A1P00352 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC24.36■■□□□ 1.49
ALDH1A1P00352 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC24.35■■□□□ 1.49
ALDH1A1P00352 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
ALDH1A1P00352 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
ALDH1A1P00352 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
ALDH1A1P00352 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC24.35■■□□□ 1.49
ALDH1A1P00352 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC24.35■■□□□ 1.49
ALDH1A1P00352 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
ALDH1A1P00352 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
ALDH1A1P00352 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC24.35■■□□□ 1.49
ALDH1A1P00352 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC24.35■■□□□ 1.49
ALDH1A1P00352 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC24.35■■□□□ 1.49
ALDH1A1P00352 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC24.35■■□□□ 1.49
ALDH1A1P00352 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC24.35■■□□□ 1.49
ALDH1A1P00352 AC069544.1-201ENST00000609399 999 ntBASIC24.35■■□□□ 1.49
ALDH1A1P00352 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC24.35■■□□□ 1.49
ALDH1A1P00352 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
ALDH1A1P00352 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
ALDH1A1P00352 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC24.34■■□□□ 1.49
ALDH1A1P00352 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
ALDH1A1P00352 OR2A1-AS1-207ENST00000486094 819 ntBASIC24.34■■□□□ 1.49
ALDH1A1P00352 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC24.34■■□□□ 1.49
ALDH1A1P00352 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
ALDH1A1P00352 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC24.34■■□□□ 1.49
ALDH1A1P00352 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
ALDH1A1P00352 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC24.34■■□□□ 1.49
ALDH1A1P00352 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC24.34■■□□□ 1.49
ALDH1A1P00352 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC24.34■■□□□ 1.49
ALDH1A1P00352 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
ALDH1A1P00352 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC24.33■■□□□ 1.49
ALDH1A1P00352 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
ALDH1A1P00352 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC24.33■■□□□ 1.49
ALDH1A1P00352 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC24.33■■□□□ 1.49
ALDH1A1P00352 AC233702.5-201ENST00000584107 538 ntBASIC24.33■■□□□ 1.49
ALDH1A1P00352 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC24.33■■□□□ 1.49
ALDH1A1P00352 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC24.32■■□□□ 1.48
ALDH1A1P00352 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC24.32■■□□□ 1.48
ALDH1A1P00352 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC24.32■■□□□ 1.48
ALDH1A1P00352 CDV3P1-201ENST00000471403 739 ntBASIC24.32■■□□□ 1.48
ALDH1A1P00352 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC24.32■■□□□ 1.48
ALDH1A1P00352 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC24.32■■□□□ 1.48
ALDH1A1P00352 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC24.32■■□□□ 1.48
ALDH1A1P00352 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC24.32■■□□□ 1.48
ALDH1A1P00352 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
ALDH1A1P00352 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
ALDH1A1P00352 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
ALDH1A1P00352 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
ALDH1A1P00352 LINC01124-201ENST00000409786 2117 ntBASIC24.31■■□□□ 1.48
ALDH1A1P00352 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC24.31■■□□□ 1.48
ALDH1A1P00352 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
ALDH1A1P00352 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC24.31■■□□□ 1.48
ALDH1A1P00352 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
ALDH1A1P00352 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
ALDH1A1P00352 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
ALDH1A1P00352 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
ALDH1A1P00352 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
ALDH1A1P00352 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
ALDH1A1P00352 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC24.3■■□□□ 1.48
ALDH1A1P00352 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
ALDH1A1P00352 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC24.3■■□□□ 1.48
ALDH1A1P00352 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
ALDH1A1P00352 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
ALDH1A1P00352 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
ALDH1A1P00352 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
ALDH1A1P00352 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC24.3■■□□□ 1.48
ALDH1A1P00352 SOX15-203ENST00000570788 1093 ntBASIC24.3■■□□□ 1.48
ALDH1A1P00352 AC233263.1-201ENST00000578059 224 ntBASIC24.3■■□□□ 1.48
ALDH1A1P00352 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC24.3■■□□□ 1.48
ALDH1A1P00352 AP001412.1-201ENST00000608405 714 ntBASIC24.3■■□□□ 1.48
ALDH1A1P00352 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
ALDH1A1P00352 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
ALDH1A1P00352 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
ALDH1A1P00352 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
ALDH1A1P00352 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
ALDH1A1P00352 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
ALDH1A1P00352 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
ALDH1A1P00352 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC24.29■■□□□ 1.48
ALDH1A1P00352 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
ALDH1A1P00352 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
ALDH1A1P00352 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC24.29■■□□□ 1.48
ALDH1A1P00352 RPS2P55-201ENST00000397318 883 ntBASIC24.29■■□□□ 1.48
ALDH1A1P00352 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC24.29■■□□□ 1.48
ALDH1A1P00352 AC107956.1-201ENST00000494359 873 ntBASIC24.29■■□□□ 1.48
ALDH1A1P00352 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC24.29■■□□□ 1.48
ALDH1A1P00352 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC24.29■■□□□ 1.48
ALDH1A1P00352 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC24.29■■□□□ 1.48
ALDH1A1P00352 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC24.29■■□□□ 1.48
ALDH1A1P00352 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC24.29■■□□□ 1.48
ALDH1A1P00352 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
ALDH1A1P00352 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC24.29■■□□□ 1.48
ALDH1A1P00352 RARG-204ENST00000543726 1779 ntTSL 2 BASIC24.29■■□□□ 1.48
ALDH1A1P00352 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC24.29■■□□□ 1.48
ALDH1A1P00352 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms