Protein–RNA interactions for Protein: O88472

Tnfrsf17, Tumor necrosis factor receptor superfamily member 17, mousemouse

Predictions only

Length 185 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf17O88472 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC17.26■□□□□ 0.35
Tnfrsf17O88472 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Tnfrsf17O88472 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC17.26■□□□□ 0.35
Tnfrsf17O88472 AC160393.1-201ENSMUST00000218378 1279 ntBASIC17.26■□□□□ 0.35
Tnfrsf17O88472 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tnfrsf17O88472 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
Tnfrsf17O88472 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC17.26■□□□□ 0.35
Tnfrsf17O88472 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Tnfrsf17O88472 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Tnfrsf17O88472 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tnfrsf17O88472 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tnfrsf17O88472 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Tnfrsf17O88472 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Tnfrsf17O88472 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tnfrsf17O88472 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Tnfrsf17O88472 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Tnfrsf17O88472 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tnfrsf17O88472 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tnfrsf17O88472 Gm18025-201ENSMUST00000221733 862 ntBASIC17.25■□□□□ 0.35
Tnfrsf17O88472 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC17.25■□□□□ 0.35
Tnfrsf17O88472 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tnfrsf17O88472 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Tnfrsf17O88472 Notumos-201ENSMUST00000151998 2659 ntBASIC17.25■□□□□ 0.35
Tnfrsf17O88472 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC17.25■□□□□ 0.35
Tnfrsf17O88472 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tnfrsf17O88472 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tnfrsf17O88472 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tnfrsf17O88472 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tnfrsf17O88472 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
Tnfrsf17O88472 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tnfrsf17O88472 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tnfrsf17O88472 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tnfrsf17O88472 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tnfrsf17O88472 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tnfrsf17O88472 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Tnfrsf17O88472 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Tnfrsf17O88472 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC17.24■□□□□ 0.35
Tnfrsf17O88472 Gm19094-201ENSMUST00000209791 1246 ntBASIC17.24■□□□□ 0.35
Tnfrsf17O88472 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC17.24■□□□□ 0.35
Tnfrsf17O88472 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tnfrsf17O88472 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tnfrsf17O88472 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Tnfrsf17O88472 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tnfrsf17O88472 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tnfrsf17O88472 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC17.23■□□□□ 0.35
Tnfrsf17O88472 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tnfrsf17O88472 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tnfrsf17O88472 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tnfrsf17O88472 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tnfrsf17O88472 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Tnfrsf17O88472 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tnfrsf17O88472 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tnfrsf17O88472 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Tnfrsf17O88472 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Tnfrsf17O88472 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tnfrsf17O88472 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tnfrsf17O88472 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tnfrsf17O88472 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tnfrsf17O88472 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tnfrsf17O88472 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Tnfrsf17O88472 Gm42545-201ENSMUST00000202755 922 ntBASIC17.23■□□□□ 0.35
Tnfrsf17O88472 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Tnfrsf17O88472 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tnfrsf17O88472 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Tnfrsf17O88472 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tnfrsf17O88472 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Tnfrsf17O88472 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC17.23■□□□□ 0.35
Tnfrsf17O88472 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tnfrsf17O88472 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tnfrsf17O88472 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tnfrsf17O88472 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tnfrsf17O88472 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Tnfrsf17O88472 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC17.22■□□□□ 0.35
Tnfrsf17O88472 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC17.22■□□□□ 0.35
Tnfrsf17O88472 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
Tnfrsf17O88472 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC17.22■□□□□ 0.35
Tnfrsf17O88472 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tnfrsf17O88472 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tnfrsf17O88472 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tnfrsf17O88472 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tnfrsf17O88472 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
Tnfrsf17O88472 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Tnfrsf17O88472 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Tnfrsf17O88472 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC17.21■□□□□ 0.35
Tnfrsf17O88472 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
Tnfrsf17O88472 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Tnfrsf17O88472 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Tnfrsf17O88472 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC17.21■□□□□ 0.35
Tnfrsf17O88472 Gm10138-203ENSMUST00000206952 366 ntBASIC17.21■□□□□ 0.35
Tnfrsf17O88472 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Tnfrsf17O88472 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Tnfrsf17O88472 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Tnfrsf17O88472 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Tnfrsf17O88472 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
Tnfrsf17O88472 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Tnfrsf17O88472 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.34
Tnfrsf17O88472 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.34
Tnfrsf17O88472 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tnfrsf17O88472 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tnfrsf17O88472 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms