Protein–RNA interactions for Protein: O88413

Tulp3, Tubby-related protein 3, mousemouse

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tulp3O88413 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Tulp3O88413 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tulp3O88413 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tulp3O88413 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tulp3O88413 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tulp3O88413 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tulp3O88413 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC17.29■□□□□ 0.36
Tulp3O88413 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC17.29■□□□□ 0.36
Tulp3O88413 Rps24-207ENSMUST00000224568 714 ntBASIC17.29■□□□□ 0.36
Tulp3O88413 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Tulp3O88413 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
Tulp3O88413 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
Tulp3O88413 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tulp3O88413 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tulp3O88413 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tulp3O88413 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Tulp3O88413 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tulp3O88413 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tulp3O88413 Gm7160-202ENSMUST00000188519 1027 ntBASIC17.28■□□□□ 0.36
Tulp3O88413 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Tulp3O88413 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Tulp3O88413 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tulp3O88413 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Tulp3O88413 Gm45906-201ENSMUST00000208911 1430 ntBASIC17.28■□□□□ 0.36
Tulp3O88413 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tulp3O88413 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tulp3O88413 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Tulp3O88413 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Tulp3O88413 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Tulp3O88413 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Tulp3O88413 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Tulp3O88413 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Tulp3O88413 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC17.27■□□□□ 0.36
Tulp3O88413 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
Tulp3O88413 Gm7860-201ENSMUST00000121190 879 ntBASIC17.27■□□□□ 0.36
Tulp3O88413 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Tulp3O88413 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Tulp3O88413 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Tulp3O88413 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Tulp3O88413 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.35
Tulp3O88413 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Tulp3O88413 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Tulp3O88413 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
Tulp3O88413 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tulp3O88413 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tulp3O88413 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Tulp3O88413 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Tulp3O88413 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Tulp3O88413 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tulp3O88413 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tulp3O88413 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tulp3O88413 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC17.26■□□□□ 0.35
Tulp3O88413 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tulp3O88413 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tulp3O88413 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC17.26■□□□□ 0.35
Tulp3O88413 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tulp3O88413 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tulp3O88413 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Tulp3O88413 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tulp3O88413 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tulp3O88413 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Tulp3O88413 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tulp3O88413 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tulp3O88413 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tulp3O88413 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tulp3O88413 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tulp3O88413 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC17.25■□□□□ 0.35
Tulp3O88413 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Tulp3O88413 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC17.25■□□□□ 0.35
Tulp3O88413 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.25■□□□□ 0.35
Tulp3O88413 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tulp3O88413 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC17.25■□□□□ 0.35
Tulp3O88413 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tulp3O88413 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tulp3O88413 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tulp3O88413 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tulp3O88413 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tulp3O88413 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tulp3O88413 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Tulp3O88413 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tulp3O88413 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC17.24■□□□□ 0.35
Tulp3O88413 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tulp3O88413 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tulp3O88413 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tulp3O88413 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Tulp3O88413 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC17.24■□□□□ 0.35
Tulp3O88413 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Tulp3O88413 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC17.24■□□□□ 0.35
Tulp3O88413 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tulp3O88413 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tulp3O88413 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tulp3O88413 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Tulp3O88413 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tulp3O88413 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC17.24■□□□□ 0.35
Tulp3O88413 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tulp3O88413 Gm37811-201ENSMUST00000192416 2601 ntBASIC17.24■□□□□ 0.35
Tulp3O88413 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Tulp3O88413 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tulp3O88413 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.24■□□□□ 0.35
Tulp3O88413 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms