Protein–RNA interactions for Protein: O55176

Pja1, E3 ubiquitin-protein ligase Praja-1, mousemouse

Predictions only

Length 578 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pja1O55176 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pja1O55176 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Pja1O55176 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pja1O55176 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC19.59■□□□□ 0.73
Pja1O55176 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Pja1O55176 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
Pja1O55176 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Pja1O55176 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Pja1O55176 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC19.58■□□□□ 0.73
Pja1O55176 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Pja1O55176 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
Pja1O55176 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Pja1O55176 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Pja1O55176 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Pja1O55176 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC19.58■□□□□ 0.72
Pja1O55176 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Pja1O55176 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
Pja1O55176 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pja1O55176 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pja1O55176 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pja1O55176 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pja1O55176 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pja1O55176 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pja1O55176 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC19.57■□□□□ 0.72
Pja1O55176 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC19.57■□□□□ 0.72
Pja1O55176 Gm38205-201ENSMUST00000192243 258 ntBASIC19.57■□□□□ 0.72
Pja1O55176 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Pja1O55176 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pja1O55176 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pja1O55176 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pja1O55176 Gm45606-201ENSMUST00000209836 2795 ntBASIC19.57■□□□□ 0.72
Pja1O55176 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
Pja1O55176 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC19.57■□□□□ 0.72
Pja1O55176 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Pja1O55176 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Pja1O55176 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pja1O55176 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pja1O55176 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pja1O55176 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Pja1O55176 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Pja1O55176 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pja1O55176 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC19.56■□□□□ 0.72
Pja1O55176 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pja1O55176 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Pja1O55176 Gm6139-201ENSMUST00000079261 882 ntBASIC19.56■□□□□ 0.72
Pja1O55176 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Pja1O55176 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Pja1O55176 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC19.56■□□□□ 0.72
Pja1O55176 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pja1O55176 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pja1O55176 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pja1O55176 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
Pja1O55176 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pja1O55176 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC19.55■□□□□ 0.72
Pja1O55176 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pja1O55176 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Pja1O55176 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pja1O55176 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pja1O55176 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Pja1O55176 Gm14281-201ENSMUST00000121700 1294 ntBASIC19.55■□□□□ 0.72
Pja1O55176 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Pja1O55176 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pja1O55176 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pja1O55176 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pja1O55176 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Pja1O55176 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pja1O55176 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pja1O55176 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Pja1O55176 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC19.54■□□□□ 0.72
Pja1O55176 Gm27454-201ENSMUST00000185090 204 ntBASIC19.54■□□□□ 0.72
Pja1O55176 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC19.54■□□□□ 0.72
Pja1O55176 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pja1O55176 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pja1O55176 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pja1O55176 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC19.54■□□□□ 0.72
Pja1O55176 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC19.54■□□□□ 0.72
Pja1O55176 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pja1O55176 Gm5828-201ENSMUST00000071842 1860 ntBASIC19.54■□□□□ 0.72
Pja1O55176 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pja1O55176 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pja1O55176 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pja1O55176 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pja1O55176 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Pja1O55176 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Pja1O55176 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pja1O55176 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pja1O55176 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC19.53■□□□□ 0.72
Pja1O55176 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pja1O55176 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC19.53■□□□□ 0.72
Pja1O55176 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC19.53■□□□□ 0.72
Pja1O55176 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pja1O55176 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pja1O55176 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pja1O55176 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pja1O55176 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC19.53■□□□□ 0.72
Pja1O55176 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pja1O55176 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pja1O55176 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Pja1O55176 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pja1O55176 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms