Protein–RNA interactions for Protein: O54990

Prom1, Prominin-1, mousemouse

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prom1O54990 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC20.54■□□□□ 0.88
Prom1O54990 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
Prom1O54990 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Prom1O54990 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Prom1O54990 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Prom1O54990 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Prom1O54990 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Prom1O54990 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Prom1O54990 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Prom1O54990 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Prom1O54990 Mir1199-201ENSMUST00000117015 119 ntBASIC20.53■□□□□ 0.88
Prom1O54990 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC20.53■□□□□ 0.88
Prom1O54990 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Prom1O54990 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Prom1O54990 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Prom1O54990 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
Prom1O54990 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC20.53■□□□□ 0.88
Prom1O54990 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Prom1O54990 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Prom1O54990 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Prom1O54990 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Prom1O54990 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Prom1O54990 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Prom1O54990 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Prom1O54990 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Prom1O54990 Gm20472-201ENSMUST00000174403 1240 ntBASIC20.52■□□□□ 0.88
Prom1O54990 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Prom1O54990 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Prom1O54990 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Prom1O54990 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Prom1O54990 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Prom1O54990 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Prom1O54990 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Prom1O54990 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Prom1O54990 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Prom1O54990 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Prom1O54990 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Prom1O54990 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Prom1O54990 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Prom1O54990 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Prom1O54990 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC20.51■□□□□ 0.87
Prom1O54990 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Prom1O54990 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
Prom1O54990 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Prom1O54990 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Prom1O54990 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Prom1O54990 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Prom1O54990 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Prom1O54990 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC20.5■□□□□ 0.87
Prom1O54990 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
Prom1O54990 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC20.5■□□□□ 0.87
Prom1O54990 AC107452.1-201ENSMUST00000227963 481 ntBASIC20.5■□□□□ 0.87
Prom1O54990 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Prom1O54990 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Prom1O54990 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Prom1O54990 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Prom1O54990 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Prom1O54990 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Prom1O54990 Golph3-202ENSMUST00000226517 2359 ntBASIC20.5■□□□□ 0.87
Prom1O54990 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Prom1O54990 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Prom1O54990 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Prom1O54990 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Prom1O54990 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Prom1O54990 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Prom1O54990 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC20.49■□□□□ 0.87
Prom1O54990 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC20.49■□□□□ 0.87
Prom1O54990 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Prom1O54990 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Prom1O54990 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Prom1O54990 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Prom1O54990 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Prom1O54990 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC20.49■□□□□ 0.87
Prom1O54990 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Prom1O54990 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Prom1O54990 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Prom1O54990 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Prom1O54990 Gm8309-201ENSMUST00000206627 1448 ntBASIC20.48■□□□□ 0.87
Prom1O54990 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Prom1O54990 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Prom1O54990 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Prom1O54990 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Prom1O54990 Flg-201ENSMUST00000050758 1488 ntBASIC20.48■□□□□ 0.87
Prom1O54990 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Prom1O54990 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Prom1O54990 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Prom1O54990 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Prom1O54990 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Prom1O54990 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Prom1O54990 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC20.47■□□□□ 0.87
Prom1O54990 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Prom1O54990 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Prom1O54990 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Prom1O54990 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC20.46■□□□□ 0.87
Prom1O54990 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Prom1O54990 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Prom1O54990 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Prom1O54990 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Prom1O54990 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Prom1O54990 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC20.46■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms