Protein–RNA interactions for Protein: O35600

Abca4, Retinal-specific ATP-binding cassette transporter, mousemouse

Predictions only

Length 2,310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca4O35600 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Abca4O35600 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Abca4O35600 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Abca4O35600 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Abca4O35600 Il17rd-202ENSMUST00000223942 2186 ntBASIC17.5■□□□□ 0.39
Abca4O35600 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Abca4O35600 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Abca4O35600 Gm34391-201ENSMUST00000203706 907 ntBASIC17.5■□□□□ 0.39
Abca4O35600 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Abca4O35600 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Abca4O35600 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC17.5■□□□□ 0.39
Abca4O35600 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC17.49■□□□□ 0.39
Abca4O35600 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Abca4O35600 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Abca4O35600 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Abca4O35600 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
Abca4O35600 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Abca4O35600 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC17.49■□□□□ 0.39
Abca4O35600 AC160393.1-201ENSMUST00000218378 1279 ntBASIC17.49■□□□□ 0.39
Abca4O35600 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Abca4O35600 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC17.49■□□□□ 0.39
Abca4O35600 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC17.49■□□□□ 0.39
Abca4O35600 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Abca4O35600 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Abca4O35600 Gm24589-201ENSMUST00000116692 94 ntBASIC17.48■□□□□ 0.39
Abca4O35600 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Abca4O35600 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Abca4O35600 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Abca4O35600 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC17.48■□□□□ 0.39
Abca4O35600 Gm32699-201ENSMUST00000221728 1988 ntBASIC17.48■□□□□ 0.39
Abca4O35600 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Abca4O35600 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Abca4O35600 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Abca4O35600 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC17.48■□□□□ 0.39
Abca4O35600 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC17.48■□□□□ 0.39
Abca4O35600 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC17.48■□□□□ 0.39
Abca4O35600 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC17.48■□□□□ 0.39
Abca4O35600 Gm43073-201ENSMUST00000198200 1189 ntBASIC17.48■□□□□ 0.39
Abca4O35600 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Abca4O35600 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC17.47■□□□□ 0.39
Abca4O35600 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Abca4O35600 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Abca4O35600 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Abca4O35600 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Abca4O35600 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Abca4O35600 Birc2-201ENSMUST00000054878 378 ntBASIC17.47■□□□□ 0.39
Abca4O35600 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC17.47■□□□□ 0.39
Abca4O35600 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Abca4O35600 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Abca4O35600 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Abca4O35600 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
Abca4O35600 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC17.47■□□□□ 0.39
Abca4O35600 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Abca4O35600 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC17.47■□□□□ 0.39
Abca4O35600 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC17.47■□□□□ 0.39
Abca4O35600 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC17.47■□□□□ 0.39
Abca4O35600 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC17.47■□□□□ 0.39
Abca4O35600 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Abca4O35600 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Abca4O35600 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Abca4O35600 Gm18733-201ENSMUST00000173950 856 ntBASIC17.46■□□□□ 0.39
Abca4O35600 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Abca4O35600 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Abca4O35600 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC17.46■□□□□ 0.39
Abca4O35600 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Abca4O35600 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Abca4O35600 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Abca4O35600 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Abca4O35600 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Abca4O35600 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Abca4O35600 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
Abca4O35600 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Abca4O35600 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Abca4O35600 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Abca4O35600 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Abca4O35600 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Abca4O35600 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Abca4O35600 Spr-ps1-201ENSMUST00000089584 605 ntBASIC17.45■□□□□ 0.38
Abca4O35600 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Abca4O35600 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Abca4O35600 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Abca4O35600 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Abca4O35600 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Abca4O35600 Gm7063-201ENSMUST00000186840 981 ntBASIC17.44■□□□□ 0.38
Abca4O35600 Gm38027-201ENSMUST00000192315 235 ntBASIC17.44■□□□□ 0.38
Abca4O35600 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC17.44■□□□□ 0.38
Abca4O35600 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Abca4O35600 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Abca4O35600 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Abca4O35600 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC17.44■□□□□ 0.38
Abca4O35600 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC17.44■□□□□ 0.38
Abca4O35600 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Abca4O35600 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Abca4O35600 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Abca4O35600 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Abca4O35600 Gm27459-201ENSMUST00000184860 107 ntBASIC17.43■□□□□ 0.38
Abca4O35600 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC17.43■□□□□ 0.38
Abca4O35600 Gm5864-201ENSMUST00000202263 970 ntBASIC17.43■□□□□ 0.38
Abca4O35600 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC17.43■□□□□ 0.38
Abca4O35600 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms