Protein–RNA interactions for Protein: O35454

Clcn6, Chloride transport protein 6, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn6O35454 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC19.52■□□□□ 0.72
Clcn6O35454 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Clcn6O35454 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC19.52■□□□□ 0.72
Clcn6O35454 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC19.52■□□□□ 0.72
Clcn6O35454 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Clcn6O35454 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Clcn6O35454 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Clcn6O35454 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Clcn6O35454 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Clcn6O35454 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Clcn6O35454 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Clcn6O35454 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Clcn6O35454 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC19.51■□□□□ 0.71
Clcn6O35454 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Clcn6O35454 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Clcn6O35454 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Clcn6O35454 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Clcn6O35454 Gm12962-202ENSMUST00000144212 691 ntTSL 2 BASIC19.51■□□□□ 0.71
Clcn6O35454 Speer4f2-201ENSMUST00000166086 1278 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Clcn6O35454 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC19.51■□□□□ 0.71
Clcn6O35454 Spcs1-204ENSMUST00000226782 949 ntBASIC19.51■□□□□ 0.71
Clcn6O35454 BC028528-201ENSMUST00000036360 752 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Clcn6O35454 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Clcn6O35454 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Clcn6O35454 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Clcn6O35454 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Clcn6O35454 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Clcn6O35454 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Clcn6O35454 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC19.51■□□□□ 0.71
Clcn6O35454 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Clcn6O35454 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Clcn6O35454 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC19.5■□□□□ 0.71
Clcn6O35454 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Clcn6O35454 Gm16275-201ENSMUST00000147774 712 ntTSL 3 BASIC19.5■□□□□ 0.71
Clcn6O35454 Gm13780-201ENSMUST00000150482 1187 ntTSL 5 BASIC19.5■□□□□ 0.71
Clcn6O35454 Oosp3-201ENSMUST00000069760 807 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Clcn6O35454 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Clcn6O35454 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC19.5■□□□□ 0.71
Clcn6O35454 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Clcn6O35454 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Clcn6O35454 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Clcn6O35454 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Clcn6O35454 AA386476-201ENSMUST00000098781 1665 ntBASIC19.49■□□□□ 0.71
Clcn6O35454 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Clcn6O35454 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Clcn6O35454 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Clcn6O35454 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Clcn6O35454 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Clcn6O35454 Gm12953-201ENSMUST00000138426 751 ntTSL 2 BASIC19.49■□□□□ 0.71
Clcn6O35454 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
Clcn6O35454 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC19.49■□□□□ 0.71
Clcn6O35454 Gm31048-201ENSMUST00000196103 1061 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Clcn6O35454 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC19.49■□□□□ 0.71
Clcn6O35454 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Clcn6O35454 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Clcn6O35454 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Clcn6O35454 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Clcn6O35454 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Clcn6O35454 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Clcn6O35454 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Clcn6O35454 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Clcn6O35454 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Clcn6O35454 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Clcn6O35454 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Clcn6O35454 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Clcn6O35454 Smgc-203ENSMUST00000109276 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Clcn6O35454 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
Clcn6O35454 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
Clcn6O35454 Gm44711-201ENSMUST00000205414 1264 ntBASIC19.48■□□□□ 0.71
Clcn6O35454 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Clcn6O35454 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Clcn6O35454 Gm37811-201ENSMUST00000192416 2601 ntBASIC19.48■□□□□ 0.71
Clcn6O35454 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Clcn6O35454 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Clcn6O35454 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Clcn6O35454 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC19.48■□□□□ 0.71
Clcn6O35454 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Clcn6O35454 Gm42535-201ENSMUST00000197312 1399 ntBASIC19.47■□□□□ 0.71
Clcn6O35454 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Clcn6O35454 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Clcn6O35454 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Clcn6O35454 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC19.47■□□□□ 0.71
Clcn6O35454 Gm7160-202ENSMUST00000188519 1027 ntBASIC19.47■□□□□ 0.71
Clcn6O35454 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Clcn6O35454 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Clcn6O35454 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Clcn6O35454 Gm37352-201ENSMUST00000193908 2181 ntBASIC19.46■□□□□ 0.71
Clcn6O35454 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Clcn6O35454 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Clcn6O35454 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Clcn6O35454 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Clcn6O35454 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Clcn6O35454 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC19.46■□□□□ 0.71
Clcn6O35454 Vmn1r-ps8-201ENSMUST00000177200 838 ntBASIC19.46■□□□□ 0.71
Clcn6O35454 Mir7075-201ENSMUST00000184187 82 ntBASIC19.46■□□□□ 0.71
Clcn6O35454 AC163354.1-207ENSMUST00000221270 1243 ntTSL 5 BASIC19.46■□□□□ 0.71
Clcn6O35454 Ifnb1-201ENSMUST00000055671 750 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Clcn6O35454 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Clcn6O35454 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Clcn6O35454 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms