Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trove2O08848 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Trove2O08848 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Trove2O08848 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC18.98■□□□□ 0.63
Trove2O08848 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC18.98■□□□□ 0.63
Trove2O08848 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Trove2O08848 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trove2O08848 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trove2O08848 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trove2O08848 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trove2O08848 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Trove2O08848 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trove2O08848 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trove2O08848 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trove2O08848 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trove2O08848 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trove2O08848 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trove2O08848 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Trove2O08848 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC18.97■□□□□ 0.63
Trove2O08848 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
Trove2O08848 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Trove2O08848 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trove2O08848 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trove2O08848 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trove2O08848 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Trove2O08848 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC18.97■□□□□ 0.63
Trove2O08848 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trove2O08848 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trove2O08848 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC18.96■□□□□ 0.63
Trove2O08848 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trove2O08848 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC18.96■□□□□ 0.63
Trove2O08848 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trove2O08848 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC18.96■□□□□ 0.63
Trove2O08848 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Trove2O08848 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trove2O08848 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trove2O08848 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trove2O08848 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Trove2O08848 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC18.96■□□□□ 0.63
Trove2O08848 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trove2O08848 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trove2O08848 Gm37811-201ENSMUST00000192416 2601 ntBASIC18.95■□□□□ 0.62
Trove2O08848 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trove2O08848 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trove2O08848 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trove2O08848 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Trove2O08848 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Trove2O08848 Gm7160-202ENSMUST00000188519 1027 ntBASIC18.95■□□□□ 0.62
Trove2O08848 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trove2O08848 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trove2O08848 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trove2O08848 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trove2O08848 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trove2O08848 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trove2O08848 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trove2O08848 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trove2O08848 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trove2O08848 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trove2O08848 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Trove2O08848 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Trove2O08848 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trove2O08848 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Trove2O08848 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Trove2O08848 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trove2O08848 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC18.94■□□□□ 0.62
Trove2O08848 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trove2O08848 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trove2O08848 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Trove2O08848 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Trove2O08848 Gm15853-202ENSMUST00000195518 2041 ntBASIC18.93■□□□□ 0.62
Trove2O08848 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trove2O08848 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC18.93■□□□□ 0.62
Trove2O08848 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC18.93■□□□□ 0.62
Trove2O08848 Spcs1-204ENSMUST00000226782 949 ntBASIC18.93■□□□□ 0.62
Trove2O08848 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trove2O08848 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trove2O08848 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC18.93■□□□□ 0.62
Trove2O08848 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
Trove2O08848 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trove2O08848 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Trove2O08848 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trove2O08848 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC18.93■□□□□ 0.62
Trove2O08848 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Trove2O08848 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Trove2O08848 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trove2O08848 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trove2O08848 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Trove2O08848 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trove2O08848 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trove2O08848 Gm12821-201ENSMUST00000120022 600 ntBASIC18.92■□□□□ 0.62
Trove2O08848 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Trove2O08848 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trove2O08848 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trove2O08848 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Trove2O08848 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Trove2O08848 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trove2O08848 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Trove2O08848 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Trove2O08848 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trove2O08848 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms