Protein–RNA interactions for Protein: J3QMG8

Trav13d-3, T cell receptor alpha variable 13D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-3J3QMG8 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trav13d-3J3QMG8 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Trav13d-3J3QMG8 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav13d-3J3QMG8 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav13d-3J3QMG8 AC131586.2-201ENSMUST00000228370 1512 ntBASIC16.31■□□□□ 0.2
Trav13d-3J3QMG8 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav13d-3J3QMG8 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav13d-3J3QMG8 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav13d-3J3QMG8 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav13d-3J3QMG8 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav13d-3J3QMG8 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC16.31■□□□□ 0.2
Trav13d-3J3QMG8 Nespas-201ENSMUST00000143738 1083 ntBASIC16.31■□□□□ 0.2
Trav13d-3J3QMG8 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC16.31■□□□□ 0.2
Trav13d-3J3QMG8 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav13d-3J3QMG8 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav13d-3J3QMG8 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav13d-3J3QMG8 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trav13d-3J3QMG8 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav13d-3J3QMG8 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Trav13d-3J3QMG8 Dapk1-207ENSMUST00000226059 5009 ntBASIC16.31■□□□□ 0.2
Trav13d-3J3QMG8 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav13d-3J3QMG8 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav13d-3J3QMG8 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC16.3■□□□□ 0.2
Trav13d-3J3QMG8 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav13d-3J3QMG8 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Trav13d-3J3QMG8 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav13d-3J3QMG8 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav13d-3J3QMG8 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
Trav13d-3J3QMG8 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav13d-3J3QMG8 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trav13d-3J3QMG8 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Trav13d-3J3QMG8 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav13d-3J3QMG8 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav13d-3J3QMG8 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC16.3■□□□□ 0.2
Trav13d-3J3QMG8 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC16.29■□□□□ 0.2
Trav13d-3J3QMG8 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav13d-3J3QMG8 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav13d-3J3QMG8 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav13d-3J3QMG8 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav13d-3J3QMG8 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC16.29■□□□□ 0.2
Trav13d-3J3QMG8 Gm8495-201ENSMUST00000188740 694 ntBASIC16.29■□□□□ 0.2
Trav13d-3J3QMG8 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC16.29■□□□□ 0.2
Trav13d-3J3QMG8 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav13d-3J3QMG8 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav13d-3J3QMG8 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trav13d-3J3QMG8 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav13d-3J3QMG8 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav13d-3J3QMG8 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav13d-3J3QMG8 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav13d-3J3QMG8 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
Trav13d-3J3QMG8 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav13d-3J3QMG8 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav13d-3J3QMG8 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trav13d-3J3QMG8 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav13d-3J3QMG8 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav13d-3J3QMG8 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav13d-3J3QMG8 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Trav13d-3J3QMG8 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav13d-3J3QMG8 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav13d-3J3QMG8 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav13d-3J3QMG8 Gm10849-201ENSMUST00000100397 618 ntBASIC16.27■□□□□ 0.2
Trav13d-3J3QMG8 Gm15039-201ENSMUST00000118914 875 ntBASIC16.27■□□□□ 0.2
Trav13d-3J3QMG8 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Trav13d-3J3QMG8 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav13d-3J3QMG8 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav13d-3J3QMG8 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Trav13d-3J3QMG8 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trav13d-3J3QMG8 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC16.27■□□□□ 0.19
Trav13d-3J3QMG8 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trav13d-3J3QMG8 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Trav13d-3J3QMG8 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trav13d-3J3QMG8 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Trav13d-3J3QMG8 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav13d-3J3QMG8 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trav13d-3J3QMG8 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC16.26■□□□□ 0.19
Trav13d-3J3QMG8 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
Trav13d-3J3QMG8 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Trav13d-3J3QMG8 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Trav13d-3J3QMG8 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav13d-3J3QMG8 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav13d-3J3QMG8 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Trav13d-3J3QMG8 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Trav13d-3J3QMG8 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav13d-3J3QMG8 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
Trav13d-3J3QMG8 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Trav13d-3J3QMG8 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Trav13d-3J3QMG8 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav13d-3J3QMG8 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
Trav13d-3J3QMG8 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav13d-3J3QMG8 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC16.25■□□□□ 0.19
Trav13d-3J3QMG8 Gm42922-201ENSMUST00000195887 2078 ntBASIC16.25■□□□□ 0.19
Trav13d-3J3QMG8 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
Trav13d-3J3QMG8 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav13d-3J3QMG8 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC16.24■□□□□ 0.19
Trav13d-3J3QMG8 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav13d-3J3QMG8 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Trav13d-3J3QMG8 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Trav13d-3J3QMG8 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav13d-3J3QMG8 Gm42569-201ENSMUST00000200539 472 ntBASIC16.24■□□□□ 0.19
Trav13d-3J3QMG8 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms