Protein–RNA interactions for Protein: F6ZNL5

Pcdh11x, Protocadherin 11 X-linked, mousemouse

Predictions only

Length 1,338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh11xF6ZNL5 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdh11xF6ZNL5 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdh11xF6ZNL5 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdh11xF6ZNL5 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdh11xF6ZNL5 Gm42922-201ENSMUST00000195887 2078 ntBASIC20.53■□□□□ 0.88
Pcdh11xF6ZNL5 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdh11xF6ZNL5 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdh11xF6ZNL5 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdh11xF6ZNL5 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdh11xF6ZNL5 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdh11xF6ZNL5 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC20.53■□□□□ 0.88
Pcdh11xF6ZNL5 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdh11xF6ZNL5 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdh11xF6ZNL5 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Pcdh11xF6ZNL5 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdh11xF6ZNL5 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC20.52■□□□□ 0.88
Pcdh11xF6ZNL5 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdh11xF6ZNL5 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdh11xF6ZNL5 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdh11xF6ZNL5 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdh11xF6ZNL5 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC20.52■□□□□ 0.88
Pcdh11xF6ZNL5 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdh11xF6ZNL5 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdh11xF6ZNL5 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdh11xF6ZNL5 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdh11xF6ZNL5 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdh11xF6ZNL5 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdh11xF6ZNL5 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdh11xF6ZNL5 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdh11xF6ZNL5 Gm8309-201ENSMUST00000206627 1448 ntBASIC20.52■□□□□ 0.87
Pcdh11xF6ZNL5 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Pcdh11xF6ZNL5 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Pcdh11xF6ZNL5 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC20.52■□□□□ 0.87
Pcdh11xF6ZNL5 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Pcdh11xF6ZNL5 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Pcdh11xF6ZNL5 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdh11xF6ZNL5 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdh11xF6ZNL5 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdh11xF6ZNL5 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdh11xF6ZNL5 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC20.51■□□□□ 0.87
Pcdh11xF6ZNL5 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Pcdh11xF6ZNL5 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC20.51■□□□□ 0.87
Pcdh11xF6ZNL5 Ap3s1-204ENSMUST00000225520 957 ntBASIC20.51■□□□□ 0.87
Pcdh11xF6ZNL5 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdh11xF6ZNL5 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdh11xF6ZNL5 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdh11xF6ZNL5 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdh11xF6ZNL5 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdh11xF6ZNL5 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Pcdh11xF6ZNL5 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdh11xF6ZNL5 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdh11xF6ZNL5 AC107452.1-201ENSMUST00000227963 481 ntBASIC20.5■□□□□ 0.87
Pcdh11xF6ZNL5 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdh11xF6ZNL5 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Pcdh11xF6ZNL5 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Pcdh11xF6ZNL5 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC20.49■□□□□ 0.87
Pcdh11xF6ZNL5 AC131586.2-201ENSMUST00000228370 1512 ntBASIC20.49■□□□□ 0.87
Pcdh11xF6ZNL5 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdh11xF6ZNL5 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdh11xF6ZNL5 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdh11xF6ZNL5 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdh11xF6ZNL5 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdh11xF6ZNL5 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdh11xF6ZNL5 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Pcdh11xF6ZNL5 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdh11xF6ZNL5 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdh11xF6ZNL5 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdh11xF6ZNL5 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdh11xF6ZNL5 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdh11xF6ZNL5 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdh11xF6ZNL5 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Pcdh11xF6ZNL5 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdh11xF6ZNL5 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Pcdh11xF6ZNL5 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdh11xF6ZNL5 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdh11xF6ZNL5 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.48■□□□□ 0.87
Pcdh11xF6ZNL5 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdh11xF6ZNL5 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdh11xF6ZNL5 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC20.48■□□□□ 0.87
Pcdh11xF6ZNL5 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
Pcdh11xF6ZNL5 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC20.48■□□□□ 0.87
Pcdh11xF6ZNL5 Spcs1-207ENSMUST00000228767 1008 ntBASIC20.48■□□□□ 0.87
Pcdh11xF6ZNL5 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdh11xF6ZNL5 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC20.48■□□□□ 0.87
Pcdh11xF6ZNL5 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdh11xF6ZNL5 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdh11xF6ZNL5 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdh11xF6ZNL5 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Pcdh11xF6ZNL5 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdh11xF6ZNL5 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdh11xF6ZNL5 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdh11xF6ZNL5 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdh11xF6ZNL5 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdh11xF6ZNL5 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdh11xF6ZNL5 Gm12933-201ENSMUST00000120203 872 ntBASIC20.47■□□□□ 0.87
Pcdh11xF6ZNL5 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
Pcdh11xF6ZNL5 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC20.47■□□□□ 0.87
Pcdh11xF6ZNL5 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdh11xF6ZNL5 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdh11xF6ZNL5 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC20.47■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms