Protein–RNA interactions for Protein: D3Z5T1

Ccdc78, Coiled-coil domain-containing protein 78, mousemouse

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc78D3Z5T1 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ccdc78D3Z5T1 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Ccdc78D3Z5T1 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC20.77■□□□□ 0.92
Ccdc78D3Z5T1 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC20.77■□□□□ 0.92
Ccdc78D3Z5T1 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
Ccdc78D3Z5T1 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC20.77■□□□□ 0.92
Ccdc78D3Z5T1 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC20.77■□□□□ 0.92
Ccdc78D3Z5T1 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ccdc78D3Z5T1 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Ccdc78D3Z5T1 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ccdc78D3Z5T1 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ccdc78D3Z5T1 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ccdc78D3Z5T1 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.91
Ccdc78D3Z5T1 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ccdc78D3Z5T1 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ccdc78D3Z5T1 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ccdc78D3Z5T1 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ccdc78D3Z5T1 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ccdc78D3Z5T1 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC20.76■□□□□ 0.91
Ccdc78D3Z5T1 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ccdc78D3Z5T1 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
Ccdc78D3Z5T1 AC160393.1-201ENSMUST00000218378 1279 ntBASIC20.76■□□□□ 0.91
Ccdc78D3Z5T1 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ccdc78D3Z5T1 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Ccdc78D3Z5T1 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Ccdc78D3Z5T1 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Ccdc78D3Z5T1 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ccdc78D3Z5T1 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ccdc78D3Z5T1 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ccdc78D3Z5T1 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Ccdc78D3Z5T1 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC20.75■□□□□ 0.91
Ccdc78D3Z5T1 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ccdc78D3Z5T1 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Ccdc78D3Z5T1 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Ccdc78D3Z5T1 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ccdc78D3Z5T1 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ccdc78D3Z5T1 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC20.75■□□□□ 0.91
Ccdc78D3Z5T1 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ccdc78D3Z5T1 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Ccdc78D3Z5T1 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Ccdc78D3Z5T1 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ccdc78D3Z5T1 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ccdc78D3Z5T1 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ccdc78D3Z5T1 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ccdc78D3Z5T1 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC20.74■□□□□ 0.91
Ccdc78D3Z5T1 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ccdc78D3Z5T1 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC20.74■□□□□ 0.91
Ccdc78D3Z5T1 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC20.74■□□□□ 0.91
Ccdc78D3Z5T1 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Ccdc78D3Z5T1 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ccdc78D3Z5T1 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ccdc78D3Z5T1 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Ccdc78D3Z5T1 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Ccdc78D3Z5T1 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Ccdc78D3Z5T1 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC20.74■□□□□ 0.91
Ccdc78D3Z5T1 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
Ccdc78D3Z5T1 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Ccdc78D3Z5T1 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Ccdc78D3Z5T1 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Ccdc78D3Z5T1 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Ccdc78D3Z5T1 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ccdc78D3Z5T1 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Ccdc78D3Z5T1 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC20.73■□□□□ 0.91
Ccdc78D3Z5T1 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Ccdc78D3Z5T1 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Ccdc78D3Z5T1 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ccdc78D3Z5T1 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Ccdc78D3Z5T1 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC20.73■□□□□ 0.91
Ccdc78D3Z5T1 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ccdc78D3Z5T1 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ccdc78D3Z5T1 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC20.73■□□□□ 0.91
Ccdc78D3Z5T1 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc78D3Z5T1 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc78D3Z5T1 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc78D3Z5T1 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc78D3Z5T1 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC20.72■□□□□ 0.91
Ccdc78D3Z5T1 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc78D3Z5T1 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc78D3Z5T1 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc78D3Z5T1 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc78D3Z5T1 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc78D3Z5T1 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc78D3Z5T1 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc78D3Z5T1 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc78D3Z5T1 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Ccdc78D3Z5T1 Gm37856-201ENSMUST00000191634 999 ntBASIC20.71■□□□□ 0.91
Ccdc78D3Z5T1 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc78D3Z5T1 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Ccdc78D3Z5T1 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc78D3Z5T1 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC20.7■□□□□ 0.9
Ccdc78D3Z5T1 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc78D3Z5T1 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC20.7■□□□□ 0.9
Ccdc78D3Z5T1 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc78D3Z5T1 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc78D3Z5T1 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc78D3Z5T1 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc78D3Z5T1 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc78D3Z5T1 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc78D3Z5T1 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ccdc78D3Z5T1 Gm12896-201ENSMUST00000118430 226 ntBASIC20.69■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms