Protein–RNA interactions for Protein: A3KG45

Gm6880, MCG1035527 (Fragment), mousemouse

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm6880A3KG45 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Gm6880A3KG45 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm6880A3KG45 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm6880A3KG45 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm6880A3KG45 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Gm6880A3KG45 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
Gm6880A3KG45 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm6880A3KG45 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm6880A3KG45 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC17.3■□□□□ 0.36
Gm6880A3KG45 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Gm6880A3KG45 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Gm6880A3KG45 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC17.3■□□□□ 0.36
Gm6880A3KG45 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Gm6880A3KG45 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm6880A3KG45 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm6880A3KG45 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm6880A3KG45 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Gm6880A3KG45 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Gm6880A3KG45 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Gm6880A3KG45 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm6880A3KG45 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Gm6880A3KG45 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm6880A3KG45 CT010444.2-201ENSMUST00000217877 1629 ntBASIC17.29■□□□□ 0.36
Gm6880A3KG45 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gm6880A3KG45 Gm45640-201ENSMUST00000210665 1896 ntBASIC17.29■□□□□ 0.36
Gm6880A3KG45 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Gm6880A3KG45 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gm6880A3KG45 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gm6880A3KG45 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC17.29■□□□□ 0.36
Gm6880A3KG45 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Gm6880A3KG45 Gm37055-201ENSMUST00000191866 133 ntBASIC17.29■□□□□ 0.36
Gm6880A3KG45 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Gm6880A3KG45 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Gm6880A3KG45 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gm6880A3KG45 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gm6880A3KG45 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Gm6880A3KG45 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gm6880A3KG45 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gm6880A3KG45 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gm6880A3KG45 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Gm6880A3KG45 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gm6880A3KG45 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gm6880A3KG45 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC17.28■□□□□ 0.36
Gm6880A3KG45 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gm6880A3KG45 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gm6880A3KG45 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Gm6880A3KG45 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Gm6880A3KG45 Gm10616-201ENSMUST00000205285 2127 ntBASIC17.27■□□□□ 0.36
Gm6880A3KG45 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC17.27■□□□□ 0.36
Gm6880A3KG45 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Gm6880A3KG45 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
Gm6880A3KG45 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Gm6880A3KG45 Wnt10b-205ENSMUST00000226846 1204 ntBASIC17.27■□□□□ 0.36
Gm6880A3KG45 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Gm6880A3KG45 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Gm6880A3KG45 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Gm6880A3KG45 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Gm6880A3KG45 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
Gm6880A3KG45 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Gm6880A3KG45 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Gm6880A3KG45 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm6880A3KG45 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm6880A3KG45 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm6880A3KG45 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC17.26■□□□□ 0.35
Gm6880A3KG45 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC17.26■□□□□ 0.35
Gm6880A3KG45 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Gm6880A3KG45 Gm29994-201ENSMUST00000195495 1193 ntBASIC17.26■□□□□ 0.35
Gm6880A3KG45 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Gm6880A3KG45 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm6880A3KG45 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm6880A3KG45 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Gm6880A3KG45 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm6880A3KG45 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm6880A3KG45 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
Gm6880A3KG45 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm6880A3KG45 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm6880A3KG45 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Gm6880A3KG45 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm6880A3KG45 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm6880A3KG45 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC17.25■□□□□ 0.35
Gm6880A3KG45 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Gm6880A3KG45 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC17.25■□□□□ 0.35
Gm6880A3KG45 Gm11927-201ENSMUST00000118472 759 ntBASIC17.25■□□□□ 0.35
Gm6880A3KG45 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Gm6880A3KG45 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm6880A3KG45 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm6880A3KG45 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm6880A3KG45 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm6880A3KG45 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Gm6880A3KG45 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm6880A3KG45 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm6880A3KG45 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC17.24■□□□□ 0.35
Gm6880A3KG45 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm6880A3KG45 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC17.24■□□□□ 0.35
Gm6880A3KG45 Gm15565-201ENSMUST00000118890 427 ntBASIC17.24■□□□□ 0.35
Gm6880A3KG45 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC17.24■□□□□ 0.35
Gm6880A3KG45 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Gm6880A3KG45 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Gm6880A3KG45 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Gm6880A3KG45 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms