Protein–RNA interactions for Protein: A0A1B0GSB3

Gm3880, Predicted pseudogene 3880, mousemouse

Predictions only

Length 72 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3880A0A1B0GSB3 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Gm3880A0A1B0GSB3 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Gm3880A0A1B0GSB3 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
Gm3880A0A1B0GSB3 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC9.25□□□□□ -0.93
Gm3880A0A1B0GSB3 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Gm3880A0A1B0GSB3 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Gm3880A0A1B0GSB3 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Gm3880A0A1B0GSB3 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Gm3880A0A1B0GSB3 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Gm3880A0A1B0GSB3 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Gm3880A0A1B0GSB3 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Gm3880A0A1B0GSB3 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC9.25□□□□□ -0.93
Gm3880A0A1B0GSB3 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC9.25□□□□□ -0.93
Gm3880A0A1B0GSB3 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Gm3880A0A1B0GSB3 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC9.25□□□□□ -0.93
Gm3880A0A1B0GSB3 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC9.25□□□□□ -0.93
Gm3880A0A1B0GSB3 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Gm3880A0A1B0GSB3 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC9.25□□□□□ -0.93
Gm3880A0A1B0GSB3 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC9.25□□□□□ -0.93
Gm3880A0A1B0GSB3 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC9.25□□□□□ -0.93
Gm3880A0A1B0GSB3 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Gm3880A0A1B0GSB3 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Gm3880A0A1B0GSB3 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Gm3880A0A1B0GSB3 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Gm3880A0A1B0GSB3 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Gm3880A0A1B0GSB3 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Gm3880A0A1B0GSB3 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC9.24□□□□□ -0.93
Gm3880A0A1B0GSB3 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Gm3880A0A1B0GSB3 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Gm3880A0A1B0GSB3 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Gm3880A0A1B0GSB3 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC9.24□□□□□ -0.93
Gm3880A0A1B0GSB3 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Gm3880A0A1B0GSB3 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC9.24□□□□□ -0.93
Gm3880A0A1B0GSB3 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Gm3880A0A1B0GSB3 Pcgf5-211ENSMUST00000225920 6443 ntBASIC9.24□□□□□ -0.93
Gm3880A0A1B0GSB3 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Gm3880A0A1B0GSB3 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Gm3880A0A1B0GSB3 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Gm3880A0A1B0GSB3 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Gm3880A0A1B0GSB3 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC9.24□□□□□ -0.93
Gm3880A0A1B0GSB3 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Gm3880A0A1B0GSB3 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Gm3880A0A1B0GSB3 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC9.24□□□□□ -0.93
Gm3880A0A1B0GSB3 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Gm3880A0A1B0GSB3 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Gm3880A0A1B0GSB3 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC9.24□□□□□ -0.93
Gm3880A0A1B0GSB3 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Gm3880A0A1B0GSB3 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC9.24□□□□□ -0.93
Gm3880A0A1B0GSB3 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Gm3880A0A1B0GSB3 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Gm3880A0A1B0GSB3 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Gm3880A0A1B0GSB3 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Gm3880A0A1B0GSB3 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Gm3880A0A1B0GSB3 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Gm3880A0A1B0GSB3 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Gm3880A0A1B0GSB3 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Gm3880A0A1B0GSB3 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC9.24□□□□□ -0.93
Gm3880A0A1B0GSB3 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC9.23□□□□□ -0.93
Gm3880A0A1B0GSB3 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Gm3880A0A1B0GSB3 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Gm3880A0A1B0GSB3 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Gm3880A0A1B0GSB3 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Gm3880A0A1B0GSB3 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Gm3880A0A1B0GSB3 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Gm3880A0A1B0GSB3 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Gm3880A0A1B0GSB3 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Gm3880A0A1B0GSB3 Gm37136-201ENSMUST00000194368 194 ntBASIC9.23□□□□□ -0.93
Gm3880A0A1B0GSB3 Gm43863-201ENSMUST00000203822 1192 ntBASIC9.23□□□□□ -0.93
Gm3880A0A1B0GSB3 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Gm3880A0A1B0GSB3 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Gm3880A0A1B0GSB3 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC9.23□□□□□ -0.93
Gm3880A0A1B0GSB3 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.93
Gm3880A0A1B0GSB3 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Gm3880A0A1B0GSB3 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Gm3880A0A1B0GSB3 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC9.23□□□□□ -0.93
Gm3880A0A1B0GSB3 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Gm3880A0A1B0GSB3 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Gm3880A0A1B0GSB3 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC9.23□□□□□ -0.93
Gm3880A0A1B0GSB3 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Gm3880A0A1B0GSB3 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC9.23□□□□□ -0.93
Gm3880A0A1B0GSB3 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC9.23□□□□□ -0.93
Gm3880A0A1B0GSB3 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Gm3880A0A1B0GSB3 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.93
Gm3880A0A1B0GSB3 BC021767-201ENSMUST00000126387 1716 ntBASIC9.22□□□□□ -0.93
Gm3880A0A1B0GSB3 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Gm3880A0A1B0GSB3 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC9.22□□□□□ -0.93
Gm3880A0A1B0GSB3 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Gm3880A0A1B0GSB3 Hivep3-201ENSMUST00000084306 2973 ntBASIC9.22□□□□□ -0.93
Gm3880A0A1B0GSB3 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Gm3880A0A1B0GSB3 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Gm3880A0A1B0GSB3 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
Gm3880A0A1B0GSB3 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Gm3880A0A1B0GSB3 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC9.22□□□□□ -0.93
Gm3880A0A1B0GSB3 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Gm3880A0A1B0GSB3 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Gm3880A0A1B0GSB3 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Gm3880A0A1B0GSB3 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC9.22□□□□□ -0.93
Gm3880A0A1B0GSB3 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC9.22□□□□□ -0.93
Gm3880A0A1B0GSB3 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC9.22□□□□□ -0.93
Gm3880A0A1B0GSB3 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms