Protein–RNA interactions for Protein: A0A140T8Q4

Igkv3-4, Immunoglobulin kappa variable 3-4 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv3-4A0A140T8Q4 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Igkv3-4A0A140T8Q4 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC11.63□□□□□ -0.55
Igkv3-4A0A140T8Q4 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Igkv3-4A0A140T8Q4 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Igkv3-4A0A140T8Q4 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Igkv3-4A0A140T8Q4 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Igkv3-4A0A140T8Q4 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Igkv3-4A0A140T8Q4 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Igkv3-4A0A140T8Q4 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Igkv3-4A0A140T8Q4 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Igkv3-4A0A140T8Q4 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Igkv3-4A0A140T8Q4 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Igkv3-4A0A140T8Q4 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Igkv3-4A0A140T8Q4 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Igkv3-4A0A140T8Q4 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Igkv3-4A0A140T8Q4 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Igkv3-4A0A140T8Q4 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC11.62□□□□□ -0.55
Igkv3-4A0A140T8Q4 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Igkv3-4A0A140T8Q4 Gm9870-201ENSMUST00000063874 645 ntBASIC11.62□□□□□ -0.55
Igkv3-4A0A140T8Q4 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Igkv3-4A0A140T8Q4 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Igkv3-4A0A140T8Q4 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Igkv3-4A0A140T8Q4 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Igkv3-4A0A140T8Q4 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Igkv3-4A0A140T8Q4 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Igkv3-4A0A140T8Q4 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Igkv3-4A0A140T8Q4 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC11.62□□□□□ -0.55
Igkv3-4A0A140T8Q4 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Igkv3-4A0A140T8Q4 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Igkv3-4A0A140T8Q4 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Igkv3-4A0A140T8Q4 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Igkv3-4A0A140T8Q4 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Igkv3-4A0A140T8Q4 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Igkv3-4A0A140T8Q4 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Igkv3-4A0A140T8Q4 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Igkv3-4A0A140T8Q4 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC11.61□□□□□ -0.55
Igkv3-4A0A140T8Q4 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Igkv3-4A0A140T8Q4 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Igkv3-4A0A140T8Q4 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC11.61□□□□□ -0.55
Igkv3-4A0A140T8Q4 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC11.61□□□□□ -0.55
Igkv3-4A0A140T8Q4 Gm43530-201ENSMUST00000195920 274 ntBASIC11.61□□□□□ -0.55
Igkv3-4A0A140T8Q4 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC11.61□□□□□ -0.55
Igkv3-4A0A140T8Q4 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC11.61□□□□□ -0.55
Igkv3-4A0A140T8Q4 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Igkv3-4A0A140T8Q4 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Igkv3-4A0A140T8Q4 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Igkv3-4A0A140T8Q4 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Igkv3-4A0A140T8Q4 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Igkv3-4A0A140T8Q4 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC11.61□□□□□ -0.55
Igkv3-4A0A140T8Q4 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC11.61□□□□□ -0.55
Igkv3-4A0A140T8Q4 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Igkv3-4A0A140T8Q4 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Igkv3-4A0A140T8Q4 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Igkv3-4A0A140T8Q4 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Igkv3-4A0A140T8Q4 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Igkv3-4A0A140T8Q4 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Igkv3-4A0A140T8Q4 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC11.6□□□□□ -0.55
Igkv3-4A0A140T8Q4 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Igkv3-4A0A140T8Q4 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Igkv3-4A0A140T8Q4 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Igkv3-4A0A140T8Q4 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Igkv3-4A0A140T8Q4 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Igkv3-4A0A140T8Q4 Gm20100-201ENSMUST00000209418 2272 ntBASIC11.6□□□□□ -0.55
Igkv3-4A0A140T8Q4 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Igkv3-4A0A140T8Q4 Gm45640-201ENSMUST00000210665 1896 ntBASIC11.6□□□□□ -0.55
Igkv3-4A0A140T8Q4 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Igkv3-4A0A140T8Q4 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
Igkv3-4A0A140T8Q4 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC11.6□□□□□ -0.55
Igkv3-4A0A140T8Q4 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC11.6□□□□□ -0.55
Igkv3-4A0A140T8Q4 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Igkv3-4A0A140T8Q4 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Igkv3-4A0A140T8Q4 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Igkv3-4A0A140T8Q4 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Igkv3-4A0A140T8Q4 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Igkv3-4A0A140T8Q4 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Igkv3-4A0A140T8Q4 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Igkv3-4A0A140T8Q4 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Igkv3-4A0A140T8Q4 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Igkv3-4A0A140T8Q4 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Igkv3-4A0A140T8Q4 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Igkv3-4A0A140T8Q4 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Igkv3-4A0A140T8Q4 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC11.59□□□□□ -0.55
Igkv3-4A0A140T8Q4 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Igkv3-4A0A140T8Q4 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Igkv3-4A0A140T8Q4 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Igkv3-4A0A140T8Q4 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC11.59□□□□□ -0.55
Igkv3-4A0A140T8Q4 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Igkv3-4A0A140T8Q4 Gm5522-201ENSMUST00000189483 1242 ntBASIC11.59□□□□□ -0.55
Igkv3-4A0A140T8Q4 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Igkv3-4A0A140T8Q4 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC11.59□□□□□ -0.55
Igkv3-4A0A140T8Q4 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Igkv3-4A0A140T8Q4 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Igkv3-4A0A140T8Q4 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Igkv3-4A0A140T8Q4 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Igkv3-4A0A140T8Q4 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Igkv3-4A0A140T8Q4 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Igkv3-4A0A140T8Q4 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Igkv3-4A0A140T8Q4 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC11.59□□□□□ -0.55
Igkv3-4A0A140T8Q4 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Igkv3-4A0A140T8Q4 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms