Protein–RNA interactions for Protein: A0A0G2LB96

Trbv29, T cell receptor beta, variable 29 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv29A0A0G2LB96 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
Trbv29A0A0G2LB96 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trbv29A0A0G2LB96 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC15.4■□□□□ 0.06
Trbv29A0A0G2LB96 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trbv29A0A0G2LB96 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trbv29A0A0G2LB96 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trbv29A0A0G2LB96 Gm42922-201ENSMUST00000195887 2078 ntBASIC15.4■□□□□ 0.06
Trbv29A0A0G2LB96 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trbv29A0A0G2LB96 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trbv29A0A0G2LB96 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trbv29A0A0G2LB96 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC15.39■□□□□ 0.05
Trbv29A0A0G2LB96 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC15.39■□□□□ 0.05
Trbv29A0A0G2LB96 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC15.39■□□□□ 0.05
Trbv29A0A0G2LB96 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trbv29A0A0G2LB96 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC15.39■□□□□ 0.05
Trbv29A0A0G2LB96 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trbv29A0A0G2LB96 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trbv29A0A0G2LB96 AC140930.3-201ENSMUST00000222935 274 ntBASIC15.39■□□□□ 0.05
Trbv29A0A0G2LB96 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC15.39■□□□□ 0.05
Trbv29A0A0G2LB96 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trbv29A0A0G2LB96 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trbv29A0A0G2LB96 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trbv29A0A0G2LB96 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trbv29A0A0G2LB96 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Trbv29A0A0G2LB96 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trbv29A0A0G2LB96 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trbv29A0A0G2LB96 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trbv29A0A0G2LB96 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trbv29A0A0G2LB96 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trbv29A0A0G2LB96 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trbv29A0A0G2LB96 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trbv29A0A0G2LB96 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trbv29A0A0G2LB96 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trbv29A0A0G2LB96 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trbv29A0A0G2LB96 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trbv29A0A0G2LB96 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trbv29A0A0G2LB96 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trbv29A0A0G2LB96 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trbv29A0A0G2LB96 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trbv29A0A0G2LB96 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Trbv29A0A0G2LB96 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trbv29A0A0G2LB96 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trbv29A0A0G2LB96 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trbv29A0A0G2LB96 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Trbv29A0A0G2LB96 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trbv29A0A0G2LB96 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Trbv29A0A0G2LB96 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trbv29A0A0G2LB96 Gm45606-201ENSMUST00000209836 2795 ntBASIC15.37■□□□□ 0.05
Trbv29A0A0G2LB96 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
Trbv29A0A0G2LB96 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Trbv29A0A0G2LB96 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Trbv29A0A0G2LB96 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC15.37■□□□□ 0.05
Trbv29A0A0G2LB96 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trbv29A0A0G2LB96 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trbv29A0A0G2LB96 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trbv29A0A0G2LB96 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trbv29A0A0G2LB96 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trbv29A0A0G2LB96 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trbv29A0A0G2LB96 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trbv29A0A0G2LB96 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trbv29A0A0G2LB96 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trbv29A0A0G2LB96 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trbv29A0A0G2LB96 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trbv29A0A0G2LB96 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trbv29A0A0G2LB96 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC15.36■□□□□ 0.05
Trbv29A0A0G2LB96 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC15.36■□□□□ 0.05
Trbv29A0A0G2LB96 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC15.36■□□□□ 0.05
Trbv29A0A0G2LB96 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trbv29A0A0G2LB96 Mir7075-201ENSMUST00000184187 82 ntBASIC15.36■□□□□ 0.05
Trbv29A0A0G2LB96 Wdr70-203ENSMUST00000227371 1130 ntBASIC15.36■□□□□ 0.05
Trbv29A0A0G2LB96 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Trbv29A0A0G2LB96 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Trbv29A0A0G2LB96 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trbv29A0A0G2LB96 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Trbv29A0A0G2LB96 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trbv29A0A0G2LB96 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trbv29A0A0G2LB96 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trbv29A0A0G2LB96 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trbv29A0A0G2LB96 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trbv29A0A0G2LB96 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
Trbv29A0A0G2LB96 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC15.35■□□□□ 0.05
Trbv29A0A0G2LB96 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trbv29A0A0G2LB96 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trbv29A0A0G2LB96 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trbv29A0A0G2LB96 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Trbv29A0A0G2LB96 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trbv29A0A0G2LB96 Gm27032-201ENSMUST00000183124 1116 ntBASIC15.35■□□□□ 0.05
Trbv29A0A0G2LB96 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Trbv29A0A0G2LB96 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trbv29A0A0G2LB96 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trbv29A0A0G2LB96 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trbv29A0A0G2LB96 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trbv29A0A0G2LB96 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trbv29A0A0G2LB96 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Trbv29A0A0G2LB96 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trbv29A0A0G2LB96 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trbv29A0A0G2LB96 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trbv29A0A0G2LB96 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trbv29A0A0G2LB96 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC15.34■□□□□ 0.05
Trbv29A0A0G2LB96 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC15.34■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms