Protein–RNA interactions for Protein: A0A0G2JFX6

Trav7-5, T cell receptor alpha variable 7-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-5A0A0G2JFX6 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav7-5A0A0G2JFX6 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav7-5A0A0G2JFX6 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav7-5A0A0G2JFX6 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC14.56□□□□□ -0.08
Trav7-5A0A0G2JFX6 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav7-5A0A0G2JFX6 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trav7-5A0A0G2JFX6 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav7-5A0A0G2JFX6 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trav7-5A0A0G2JFX6 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav7-5A0A0G2JFX6 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav7-5A0A0G2JFX6 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC14.55□□□□□ -0.08
Trav7-5A0A0G2JFX6 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC14.55□□□□□ -0.08
Trav7-5A0A0G2JFX6 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trav7-5A0A0G2JFX6 Gm26571-201ENSMUST00000181399 666 ntBASIC14.55□□□□□ -0.08
Trav7-5A0A0G2JFX6 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC14.55□□□□□ -0.08
Trav7-5A0A0G2JFX6 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trav7-5A0A0G2JFX6 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Trav7-5A0A0G2JFX6 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trav7-5A0A0G2JFX6 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav7-5A0A0G2JFX6 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav7-5A0A0G2JFX6 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav7-5A0A0G2JFX6 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav7-5A0A0G2JFX6 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trav7-5A0A0G2JFX6 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav7-5A0A0G2JFX6 Gm37352-201ENSMUST00000193908 2181 ntBASIC14.54□□□□□ -0.08
Trav7-5A0A0G2JFX6 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav7-5A0A0G2JFX6 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trav7-5A0A0G2JFX6 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trav7-5A0A0G2JFX6 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav7-5A0A0G2JFX6 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC14.54□□□□□ -0.08
Trav7-5A0A0G2JFX6 Gm7291-201ENSMUST00000199147 382 ntBASIC14.54□□□□□ -0.08
Trav7-5A0A0G2JFX6 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav7-5A0A0G2JFX6 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav7-5A0A0G2JFX6 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav7-5A0A0G2JFX6 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav7-5A0A0G2JFX6 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav7-5A0A0G2JFX6 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav7-5A0A0G2JFX6 Gm42900-201ENSMUST00000197184 2167 ntBASIC14.54□□□□□ -0.08
Trav7-5A0A0G2JFX6 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav7-5A0A0G2JFX6 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
Trav7-5A0A0G2JFX6 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trav7-5A0A0G2JFX6 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav7-5A0A0G2JFX6 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav7-5A0A0G2JFX6 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trav7-5A0A0G2JFX6 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav7-5A0A0G2JFX6 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trav7-5A0A0G2JFX6 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trav7-5A0A0G2JFX6 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC14.53□□□□□ -0.08
Trav7-5A0A0G2JFX6 AC126028.2-201ENSMUST00000228100 1833 ntBASIC14.53□□□□□ -0.08
Trav7-5A0A0G2JFX6 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav7-5A0A0G2JFX6 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav7-5A0A0G2JFX6 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trav7-5A0A0G2JFX6 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC14.53□□□□□ -0.08
Trav7-5A0A0G2JFX6 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC14.53□□□□□ -0.08
Trav7-5A0A0G2JFX6 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Trav7-5A0A0G2JFX6 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC14.53□□□□□ -0.08
Trav7-5A0A0G2JFX6 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav7-5A0A0G2JFX6 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav7-5A0A0G2JFX6 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC14.53□□□□□ -0.08
Trav7-5A0A0G2JFX6 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav7-5A0A0G2JFX6 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav7-5A0A0G2JFX6 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav7-5A0A0G2JFX6 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav7-5A0A0G2JFX6 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav7-5A0A0G2JFX6 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav7-5A0A0G2JFX6 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Trav7-5A0A0G2JFX6 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
Trav7-5A0A0G2JFX6 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav7-5A0A0G2JFX6 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Trav7-5A0A0G2JFX6 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav7-5A0A0G2JFX6 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav7-5A0A0G2JFX6 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav7-5A0A0G2JFX6 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Trav7-5A0A0G2JFX6 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC14.52□□□□□ -0.09
Trav7-5A0A0G2JFX6 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC14.52□□□□□ -0.09
Trav7-5A0A0G2JFX6 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC14.52□□□□□ -0.09
Trav7-5A0A0G2JFX6 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC14.52□□□□□ -0.09
Trav7-5A0A0G2JFX6 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav7-5A0A0G2JFX6 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Trav7-5A0A0G2JFX6 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav7-5A0A0G2JFX6 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Trav7-5A0A0G2JFX6 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav7-5A0A0G2JFX6 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trav7-5A0A0G2JFX6 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav7-5A0A0G2JFX6 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Trav7-5A0A0G2JFX6 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav7-5A0A0G2JFX6 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav7-5A0A0G2JFX6 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav7-5A0A0G2JFX6 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav7-5A0A0G2JFX6 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trav7-5A0A0G2JFX6 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
Trav7-5A0A0G2JFX6 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC14.51□□□□□ -0.09
Trav7-5A0A0G2JFX6 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Trav7-5A0A0G2JFX6 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav7-5A0A0G2JFX6 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav7-5A0A0G2JFX6 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trav7-5A0A0G2JFX6 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav7-5A0A0G2JFX6 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Trav7-5A0A0G2JFX6 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trav7-5A0A0G2JFX6 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC14.51□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms