Protein–RNA interactions for Protein: A0A0G2JEW2

Tcrg-V3, T cell receptor gamma, variable 3 (Fragment), mousemouse

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcrg-V3A0A0G2JEW2 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Tcrg-V3A0A0G2JEW2 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tcrg-V3A0A0G2JEW2 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tcrg-V3A0A0G2JEW2 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC17.93■□□□□ 0.46
Tcrg-V3A0A0G2JEW2 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tcrg-V3A0A0G2JEW2 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tcrg-V3A0A0G2JEW2 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tcrg-V3A0A0G2JEW2 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tcrg-V3A0A0G2JEW2 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tcrg-V3A0A0G2JEW2 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Tcrg-V3A0A0G2JEW2 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Tcrg-V3A0A0G2JEW2 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tcrg-V3A0A0G2JEW2 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tcrg-V3A0A0G2JEW2 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tcrg-V3A0A0G2JEW2 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC17.92■□□□□ 0.46
Tcrg-V3A0A0G2JEW2 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tcrg-V3A0A0G2JEW2 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Tcrg-V3A0A0G2JEW2 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Tcrg-V3A0A0G2JEW2 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tcrg-V3A0A0G2JEW2 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tcrg-V3A0A0G2JEW2 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Tcrg-V3A0A0G2JEW2 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Tcrg-V3A0A0G2JEW2 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Tcrg-V3A0A0G2JEW2 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Tcrg-V3A0A0G2JEW2 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Tcrg-V3A0A0G2JEW2 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Tcrg-V3A0A0G2JEW2 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Tcrg-V3A0A0G2JEW2 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Tcrg-V3A0A0G2JEW2 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Tcrg-V3A0A0G2JEW2 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC17.91■□□□□ 0.46
Tcrg-V3A0A0G2JEW2 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC17.91■□□□□ 0.46
Tcrg-V3A0A0G2JEW2 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Tcrg-V3A0A0G2JEW2 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Tcrg-V3A0A0G2JEW2 Rncr4-201ENSMUST00000194541 2234 ntBASIC17.91■□□□□ 0.46
Tcrg-V3A0A0G2JEW2 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Tcrg-V3A0A0G2JEW2 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Tcrg-V3A0A0G2JEW2 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC17.9■□□□□ 0.46
Tcrg-V3A0A0G2JEW2 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Tcrg-V3A0A0G2JEW2 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Tcrg-V3A0A0G2JEW2 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Tcrg-V3A0A0G2JEW2 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Tcrg-V3A0A0G2JEW2 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Tcrg-V3A0A0G2JEW2 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC17.9■□□□□ 0.46
Tcrg-V3A0A0G2JEW2 Gm10653-202ENSMUST00000139570 835 ntBASIC17.9■□□□□ 0.46
Tcrg-V3A0A0G2JEW2 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Tcrg-V3A0A0G2JEW2 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Tcrg-V3A0A0G2JEW2 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Tcrg-V3A0A0G2JEW2 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC17.9■□□□□ 0.46
Tcrg-V3A0A0G2JEW2 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Tcrg-V3A0A0G2JEW2 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Tcrg-V3A0A0G2JEW2 BC021767-201ENSMUST00000126387 1716 ntBASIC17.89■□□□□ 0.46
Tcrg-V3A0A0G2JEW2 Gm15853-202ENSMUST00000195518 2041 ntBASIC17.89■□□□□ 0.46
Tcrg-V3A0A0G2JEW2 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Tcrg-V3A0A0G2JEW2 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Tcrg-V3A0A0G2JEW2 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Tcrg-V3A0A0G2JEW2 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Tcrg-V3A0A0G2JEW2 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC17.89■□□□□ 0.45
Tcrg-V3A0A0G2JEW2 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Tcrg-V3A0A0G2JEW2 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Tcrg-V3A0A0G2JEW2 Gm44549-201ENSMUST00000208351 577 ntBASIC17.89■□□□□ 0.45
Tcrg-V3A0A0G2JEW2 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC17.89■□□□□ 0.45
Tcrg-V3A0A0G2JEW2 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Tcrg-V3A0A0G2JEW2 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Tcrg-V3A0A0G2JEW2 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Tcrg-V3A0A0G2JEW2 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Tcrg-V3A0A0G2JEW2 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Tcrg-V3A0A0G2JEW2 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Tcrg-V3A0A0G2JEW2 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Tcrg-V3A0A0G2JEW2 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Tcrg-V3A0A0G2JEW2 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Tcrg-V3A0A0G2JEW2 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Tcrg-V3A0A0G2JEW2 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Tcrg-V3A0A0G2JEW2 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Tcrg-V3A0A0G2JEW2 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Tcrg-V3A0A0G2JEW2 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Tcrg-V3A0A0G2JEW2 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
Tcrg-V3A0A0G2JEW2 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
Tcrg-V3A0A0G2JEW2 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Tcrg-V3A0A0G2JEW2 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Tcrg-V3A0A0G2JEW2 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Tcrg-V3A0A0G2JEW2 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Tcrg-V3A0A0G2JEW2 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC17.88■□□□□ 0.45
Tcrg-V3A0A0G2JEW2 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Tcrg-V3A0A0G2JEW2 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Tcrg-V3A0A0G2JEW2 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Tcrg-V3A0A0G2JEW2 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Tcrg-V3A0A0G2JEW2 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Tcrg-V3A0A0G2JEW2 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Tcrg-V3A0A0G2JEW2 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Tcrg-V3A0A0G2JEW2 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Tcrg-V3A0A0G2JEW2 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Tcrg-V3A0A0G2JEW2 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Tcrg-V3A0A0G2JEW2 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC17.87■□□□□ 0.45
Tcrg-V3A0A0G2JEW2 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
Tcrg-V3A0A0G2JEW2 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Tcrg-V3A0A0G2JEW2 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Tcrg-V3A0A0G2JEW2 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Tcrg-V3A0A0G2JEW2 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Tcrg-V3A0A0G2JEW2 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Tcrg-V3A0A0G2JEW2 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms