Protein–RNA interactions for Protein: A0A0B4J1K1

Trav4-3, T cell receptor alpha variable 4-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-3A0A0B4J1K1 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC12.67□□□□□ -0.38
Trav4-3A0A0B4J1K1 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
Trav4-3A0A0B4J1K1 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Trav4-3A0A0B4J1K1 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav4-3A0A0B4J1K1 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav4-3A0A0B4J1K1 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC12.66□□□□□ -0.38
Trav4-3A0A0B4J1K1 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav4-3A0A0B4J1K1 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav4-3A0A0B4J1K1 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav4-3A0A0B4J1K1 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav4-3A0A0B4J1K1 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav4-3A0A0B4J1K1 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav4-3A0A0B4J1K1 Gm6085-201ENSMUST00000182774 1470 ntBASIC12.66□□□□□ -0.38
Trav4-3A0A0B4J1K1 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav4-3A0A0B4J1K1 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Trav4-3A0A0B4J1K1 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC12.66□□□□□ -0.38
Trav4-3A0A0B4J1K1 Gm27045-201ENSMUST00000182145 1402 ntBASIC12.66□□□□□ -0.38
Trav4-3A0A0B4J1K1 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC12.66□□□□□ -0.38
Trav4-3A0A0B4J1K1 Gm45444-201ENSMUST00000211394 898 ntBASIC12.66□□□□□ -0.38
Trav4-3A0A0B4J1K1 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Trav4-3A0A0B4J1K1 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav4-3A0A0B4J1K1 Gm6598-201ENSMUST00000202719 2615 ntBASIC12.66□□□□□ -0.38
Trav4-3A0A0B4J1K1 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav4-3A0A0B4J1K1 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Trav4-3A0A0B4J1K1 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav4-3A0A0B4J1K1 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav4-3A0A0B4J1K1 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
Trav4-3A0A0B4J1K1 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC12.66□□□□□ -0.38
Trav4-3A0A0B4J1K1 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav4-3A0A0B4J1K1 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav4-3A0A0B4J1K1 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav4-3A0A0B4J1K1 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC12.65□□□□□ -0.38
Trav4-3A0A0B4J1K1 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav4-3A0A0B4J1K1 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav4-3A0A0B4J1K1 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Trav4-3A0A0B4J1K1 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav4-3A0A0B4J1K1 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Trav4-3A0A0B4J1K1 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav4-3A0A0B4J1K1 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav4-3A0A0B4J1K1 Fcho2-208ENSMUST00000224992 2964 ntBASIC12.65□□□□□ -0.38
Trav4-3A0A0B4J1K1 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav4-3A0A0B4J1K1 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav4-3A0A0B4J1K1 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav4-3A0A0B4J1K1 Gm10657-201ENSMUST00000193528 1031 ntBASIC12.65□□□□□ -0.38
Trav4-3A0A0B4J1K1 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav4-3A0A0B4J1K1 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
Trav4-3A0A0B4J1K1 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav4-3A0A0B4J1K1 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav4-3A0A0B4J1K1 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav4-3A0A0B4J1K1 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav4-3A0A0B4J1K1 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC12.65□□□□□ -0.38
Trav4-3A0A0B4J1K1 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav4-3A0A0B4J1K1 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Trav4-3A0A0B4J1K1 Gm38308-201ENSMUST00000194934 1809 ntBASIC12.65□□□□□ -0.39
Trav4-3A0A0B4J1K1 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav4-3A0A0B4J1K1 AC154231.1-201ENSMUST00000220564 2175 ntBASIC12.64□□□□□ -0.39
Trav4-3A0A0B4J1K1 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav4-3A0A0B4J1K1 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav4-3A0A0B4J1K1 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav4-3A0A0B4J1K1 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav4-3A0A0B4J1K1 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav4-3A0A0B4J1K1 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC12.64□□□□□ -0.39
Trav4-3A0A0B4J1K1 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav4-3A0A0B4J1K1 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC12.64□□□□□ -0.39
Trav4-3A0A0B4J1K1 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Trav4-3A0A0B4J1K1 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav4-3A0A0B4J1K1 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav4-3A0A0B4J1K1 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav4-3A0A0B4J1K1 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Trav4-3A0A0B4J1K1 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav4-3A0A0B4J1K1 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav4-3A0A0B4J1K1 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav4-3A0A0B4J1K1 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav4-3A0A0B4J1K1 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav4-3A0A0B4J1K1 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav4-3A0A0B4J1K1 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav4-3A0A0B4J1K1 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav4-3A0A0B4J1K1 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav4-3A0A0B4J1K1 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav4-3A0A0B4J1K1 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav4-3A0A0B4J1K1 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav4-3A0A0B4J1K1 Nsd1-203ENSMUST00000224156 1149 ntBASIC12.63□□□□□ -0.39
Trav4-3A0A0B4J1K1 Gm9870-201ENSMUST00000063874 645 ntBASIC12.63□□□□□ -0.39
Trav4-3A0A0B4J1K1 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav4-3A0A0B4J1K1 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav4-3A0A0B4J1K1 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC12.63□□□□□ -0.39
Trav4-3A0A0B4J1K1 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav4-3A0A0B4J1K1 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Trav4-3A0A0B4J1K1 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Trav4-3A0A0B4J1K1 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Trav4-3A0A0B4J1K1 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
Trav4-3A0A0B4J1K1 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav4-3A0A0B4J1K1 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav4-3A0A0B4J1K1 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav4-3A0A0B4J1K1 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav4-3A0A0B4J1K1 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav4-3A0A0B4J1K1 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC12.62□□□□□ -0.39
Trav4-3A0A0B4J1K1 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav4-3A0A0B4J1K1 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav4-3A0A0B4J1K1 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms