Protein–RNA interactions for Protein: A0A0B4J1H5

Trbv20, T cell receptor beta, variable 20 (Fragment), mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv20A0A0B4J1H5 Gm43548-201ENSMUST00000197139 2353 ntBASIC16.62■□□□□ 0.25
Trbv20A0A0B4J1H5 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC16.61■□□□□ 0.25
Trbv20A0A0B4J1H5 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trbv20A0A0B4J1H5 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
Trbv20A0A0B4J1H5 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trbv20A0A0B4J1H5 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trbv20A0A0B4J1H5 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trbv20A0A0B4J1H5 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Trbv20A0A0B4J1H5 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC16.61■□□□□ 0.25
Trbv20A0A0B4J1H5 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trbv20A0A0B4J1H5 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trbv20A0A0B4J1H5 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trbv20A0A0B4J1H5 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trbv20A0A0B4J1H5 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Trbv20A0A0B4J1H5 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Trbv20A0A0B4J1H5 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trbv20A0A0B4J1H5 Zcchc6-207ENSMUST00000225576 2499 ntBASIC16.61■□□□□ 0.25
Trbv20A0A0B4J1H5 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trbv20A0A0B4J1H5 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trbv20A0A0B4J1H5 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trbv20A0A0B4J1H5 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trbv20A0A0B4J1H5 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trbv20A0A0B4J1H5 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trbv20A0A0B4J1H5 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trbv20A0A0B4J1H5 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC16.6■□□□□ 0.25
Trbv20A0A0B4J1H5 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trbv20A0A0B4J1H5 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trbv20A0A0B4J1H5 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Trbv20A0A0B4J1H5 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC16.6■□□□□ 0.25
Trbv20A0A0B4J1H5 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Trbv20A0A0B4J1H5 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
Trbv20A0A0B4J1H5 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trbv20A0A0B4J1H5 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trbv20A0A0B4J1H5 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trbv20A0A0B4J1H5 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trbv20A0A0B4J1H5 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trbv20A0A0B4J1H5 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC16.59■□□□□ 0.25
Trbv20A0A0B4J1H5 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC16.59■□□□□ 0.25
Trbv20A0A0B4J1H5 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC16.59■□□□□ 0.25
Trbv20A0A0B4J1H5 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC16.59■□□□□ 0.25
Trbv20A0A0B4J1H5 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trbv20A0A0B4J1H5 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trbv20A0A0B4J1H5 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
Trbv20A0A0B4J1H5 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trbv20A0A0B4J1H5 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trbv20A0A0B4J1H5 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trbv20A0A0B4J1H5 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Trbv20A0A0B4J1H5 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trbv20A0A0B4J1H5 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trbv20A0A0B4J1H5 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trbv20A0A0B4J1H5 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Trbv20A0A0B4J1H5 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Trbv20A0A0B4J1H5 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Trbv20A0A0B4J1H5 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Trbv20A0A0B4J1H5 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trbv20A0A0B4J1H5 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Trbv20A0A0B4J1H5 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Trbv20A0A0B4J1H5 Cap2-205ENSMUST00000225824 1634 ntBASIC16.58■□□□□ 0.24
Trbv20A0A0B4J1H5 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC16.58■□□□□ 0.24
Trbv20A0A0B4J1H5 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trbv20A0A0B4J1H5 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trbv20A0A0B4J1H5 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trbv20A0A0B4J1H5 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trbv20A0A0B4J1H5 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Trbv20A0A0B4J1H5 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC16.57■□□□□ 0.24
Trbv20A0A0B4J1H5 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trbv20A0A0B4J1H5 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Trbv20A0A0B4J1H5 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC16.57■□□□□ 0.24
Trbv20A0A0B4J1H5 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Trbv20A0A0B4J1H5 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trbv20A0A0B4J1H5 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trbv20A0A0B4J1H5 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
Trbv20A0A0B4J1H5 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Trbv20A0A0B4J1H5 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Trbv20A0A0B4J1H5 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
Trbv20A0A0B4J1H5 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trbv20A0A0B4J1H5 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Trbv20A0A0B4J1H5 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trbv20A0A0B4J1H5 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Trbv20A0A0B4J1H5 Gm15635-204ENSMUST00000208024 2539 ntBASIC16.56■□□□□ 0.24
Trbv20A0A0B4J1H5 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trbv20A0A0B4J1H5 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trbv20A0A0B4J1H5 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trbv20A0A0B4J1H5 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trbv20A0A0B4J1H5 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Trbv20A0A0B4J1H5 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC16.56■□□□□ 0.24
Trbv20A0A0B4J1H5 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trbv20A0A0B4J1H5 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trbv20A0A0B4J1H5 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trbv20A0A0B4J1H5 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trbv20A0A0B4J1H5 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trbv20A0A0B4J1H5 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trbv20A0A0B4J1H5 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Trbv20A0A0B4J1H5 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trbv20A0A0B4J1H5 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trbv20A0A0B4J1H5 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trbv20A0A0B4J1H5 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trbv20A0A0B4J1H5 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trbv20A0A0B4J1H5 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trbv20A0A0B4J1H5 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms