Protein–RNA interactions for Protein: A0A0B4J1H2

Trbv13-3, T cell receptor beta, variable 13-3 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-3A0A0B4J1H2 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trbv13-3A0A0B4J1H2 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trbv13-3A0A0B4J1H2 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC14.48□□□□□ -0.09
Trbv13-3A0A0B4J1H2 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trbv13-3A0A0B4J1H2 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trbv13-3A0A0B4J1H2 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC14.48□□□□□ -0.09
Trbv13-3A0A0B4J1H2 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trbv13-3A0A0B4J1H2 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trbv13-3A0A0B4J1H2 Gm15743-202ENSMUST00000182690 1901 ntBASIC14.48□□□□□ -0.09
Trbv13-3A0A0B4J1H2 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
Trbv13-3A0A0B4J1H2 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trbv13-3A0A0B4J1H2 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trbv13-3A0A0B4J1H2 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trbv13-3A0A0B4J1H2 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trbv13-3A0A0B4J1H2 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trbv13-3A0A0B4J1H2 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trbv13-3A0A0B4J1H2 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trbv13-3A0A0B4J1H2 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trbv13-3A0A0B4J1H2 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC14.47□□□□□ -0.09
Trbv13-3A0A0B4J1H2 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trbv13-3A0A0B4J1H2 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trbv13-3A0A0B4J1H2 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Trbv13-3A0A0B4J1H2 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trbv13-3A0A0B4J1H2 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trbv13-3A0A0B4J1H2 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC14.47□□□□□ -0.09
Trbv13-3A0A0B4J1H2 Gm40881-201ENSMUST00000223397 166 ntBASIC14.47□□□□□ -0.09
Trbv13-3A0A0B4J1H2 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trbv13-3A0A0B4J1H2 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trbv13-3A0A0B4J1H2 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trbv13-3A0A0B4J1H2 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Trbv13-3A0A0B4J1H2 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trbv13-3A0A0B4J1H2 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trbv13-3A0A0B4J1H2 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trbv13-3A0A0B4J1H2 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Trbv13-3A0A0B4J1H2 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trbv13-3A0A0B4J1H2 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trbv13-3A0A0B4J1H2 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
Trbv13-3A0A0B4J1H2 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trbv13-3A0A0B4J1H2 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trbv13-3A0A0B4J1H2 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trbv13-3A0A0B4J1H2 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trbv13-3A0A0B4J1H2 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC14.46□□□□□ -0.09
Trbv13-3A0A0B4J1H2 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trbv13-3A0A0B4J1H2 Gm13238-201ENSMUST00000117655 780 ntBASIC14.46□□□□□ -0.09
Trbv13-3A0A0B4J1H2 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Trbv13-3A0A0B4J1H2 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Trbv13-3A0A0B4J1H2 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trbv13-3A0A0B4J1H2 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trbv13-3A0A0B4J1H2 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Trbv13-3A0A0B4J1H2 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC14.46□□□□□ -0.1
Trbv13-3A0A0B4J1H2 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trbv13-3A0A0B4J1H2 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trbv13-3A0A0B4J1H2 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trbv13-3A0A0B4J1H2 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trbv13-3A0A0B4J1H2 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trbv13-3A0A0B4J1H2 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC14.45□□□□□ -0.1
Trbv13-3A0A0B4J1H2 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trbv13-3A0A0B4J1H2 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trbv13-3A0A0B4J1H2 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trbv13-3A0A0B4J1H2 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trbv13-3A0A0B4J1H2 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trbv13-3A0A0B4J1H2 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trbv13-3A0A0B4J1H2 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trbv13-3A0A0B4J1H2 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trbv13-3A0A0B4J1H2 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trbv13-3A0A0B4J1H2 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trbv13-3A0A0B4J1H2 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trbv13-3A0A0B4J1H2 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Trbv13-3A0A0B4J1H2 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trbv13-3A0A0B4J1H2 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trbv13-3A0A0B4J1H2 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trbv13-3A0A0B4J1H2 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trbv13-3A0A0B4J1H2 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Trbv13-3A0A0B4J1H2 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC14.44□□□□□ -0.1
Trbv13-3A0A0B4J1H2 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC14.44□□□□□ -0.1
Trbv13-3A0A0B4J1H2 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC14.44□□□□□ -0.1
Trbv13-3A0A0B4J1H2 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trbv13-3A0A0B4J1H2 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trbv13-3A0A0B4J1H2 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trbv13-3A0A0B4J1H2 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trbv13-3A0A0B4J1H2 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trbv13-3A0A0B4J1H2 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trbv13-3A0A0B4J1H2 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trbv13-3A0A0B4J1H2 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trbv13-3A0A0B4J1H2 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trbv13-3A0A0B4J1H2 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trbv13-3A0A0B4J1H2 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trbv13-3A0A0B4J1H2 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Trbv13-3A0A0B4J1H2 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
Trbv13-3A0A0B4J1H2 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Trbv13-3A0A0B4J1H2 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trbv13-3A0A0B4J1H2 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trbv13-3A0A0B4J1H2 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC14.43□□□□□ -0.1
Trbv13-3A0A0B4J1H2 Gm43566-201ENSMUST00000196851 808 ntBASIC14.43□□□□□ -0.1
Trbv13-3A0A0B4J1H2 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trbv13-3A0A0B4J1H2 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trbv13-3A0A0B4J1H2 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trbv13-3A0A0B4J1H2 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trbv13-3A0A0B4J1H2 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trbv13-3A0A0B4J1H2 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms