Protein–RNA interactions for Protein: A0A0B4J1G9

Trbv5, T cell receptor beta, variable 5 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv5A0A0B4J1G9 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trbv5A0A0B4J1G9 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Trbv5A0A0B4J1G9 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trbv5A0A0B4J1G9 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trbv5A0A0B4J1G9 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trbv5A0A0B4J1G9 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trbv5A0A0B4J1G9 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Trbv5A0A0B4J1G9 Gm13238-201ENSMUST00000117655 780 ntBASIC14.93□□□□□ -0.02
Trbv5A0A0B4J1G9 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trbv5A0A0B4J1G9 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC14.93□□□□□ -0.02
Trbv5A0A0B4J1G9 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC14.93□□□□□ -0.02
Trbv5A0A0B4J1G9 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Trbv5A0A0B4J1G9 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Trbv5A0A0B4J1G9 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trbv5A0A0B4J1G9 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trbv5A0A0B4J1G9 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trbv5A0A0B4J1G9 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trbv5A0A0B4J1G9 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trbv5A0A0B4J1G9 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv5A0A0B4J1G9 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Trbv5A0A0B4J1G9 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv5A0A0B4J1G9 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv5A0A0B4J1G9 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Trbv5A0A0B4J1G9 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv5A0A0B4J1G9 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv5A0A0B4J1G9 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv5A0A0B4J1G9 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv5A0A0B4J1G9 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv5A0A0B4J1G9 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv5A0A0B4J1G9 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv5A0A0B4J1G9 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv5A0A0B4J1G9 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv5A0A0B4J1G9 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv5A0A0B4J1G9 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv5A0A0B4J1G9 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trbv5A0A0B4J1G9 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trbv5A0A0B4J1G9 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trbv5A0A0B4J1G9 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trbv5A0A0B4J1G9 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trbv5A0A0B4J1G9 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trbv5A0A0B4J1G9 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trbv5A0A0B4J1G9 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC14.91□□□□□ -0.02
Trbv5A0A0B4J1G9 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trbv5A0A0B4J1G9 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trbv5A0A0B4J1G9 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC14.91□□□□□ -0.02
Trbv5A0A0B4J1G9 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC14.91□□□□□ -0.02
Trbv5A0A0B4J1G9 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC14.91□□□□□ -0.02
Trbv5A0A0B4J1G9 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Trbv5A0A0B4J1G9 Gm40881-201ENSMUST00000223397 166 ntBASIC14.91□□□□□ -0.02
Trbv5A0A0B4J1G9 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC14.91□□□□□ -0.02
Trbv5A0A0B4J1G9 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trbv5A0A0B4J1G9 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trbv5A0A0B4J1G9 Gm10232-201ENSMUST00000089221 720 ntBASIC14.91□□□□□ -0.02
Trbv5A0A0B4J1G9 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC14.91□□□□□ -0.02
Trbv5A0A0B4J1G9 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trbv5A0A0B4J1G9 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trbv5A0A0B4J1G9 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trbv5A0A0B4J1G9 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trbv5A0A0B4J1G9 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trbv5A0A0B4J1G9 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv5A0A0B4J1G9 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv5A0A0B4J1G9 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv5A0A0B4J1G9 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv5A0A0B4J1G9 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Trbv5A0A0B4J1G9 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv5A0A0B4J1G9 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv5A0A0B4J1G9 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv5A0A0B4J1G9 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv5A0A0B4J1G9 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv5A0A0B4J1G9 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv5A0A0B4J1G9 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC14.9□□□□□ -0.02
Trbv5A0A0B4J1G9 Gm5921-201ENSMUST00000075898 882 ntBASIC14.9□□□□□ -0.02
Trbv5A0A0B4J1G9 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv5A0A0B4J1G9 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv5A0A0B4J1G9 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv5A0A0B4J1G9 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv5A0A0B4J1G9 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC14.9□□□□□ -0.02
Trbv5A0A0B4J1G9 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv5A0A0B4J1G9 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv5A0A0B4J1G9 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv5A0A0B4J1G9 Gm5898-201ENSMUST00000121016 2071 ntBASIC14.89□□□□□ -0.03
Trbv5A0A0B4J1G9 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Trbv5A0A0B4J1G9 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trbv5A0A0B4J1G9 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trbv5A0A0B4J1G9 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trbv5A0A0B4J1G9 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Trbv5A0A0B4J1G9 Gm42911-201ENSMUST00000199360 1630 ntBASIC14.89□□□□□ -0.03
Trbv5A0A0B4J1G9 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trbv5A0A0B4J1G9 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trbv5A0A0B4J1G9 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Trbv5A0A0B4J1G9 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trbv5A0A0B4J1G9 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trbv5A0A0B4J1G9 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trbv5A0A0B4J1G9 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trbv5A0A0B4J1G9 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trbv5A0A0B4J1G9 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trbv5A0A0B4J1G9 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trbv5A0A0B4J1G9 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trbv5A0A0B4J1G9 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC14.89□□□□□ -0.03
Trbv5A0A0B4J1G9 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC14.88□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms