Protein–RNA interactions for Protein: A0A0A6YXG2

Ighv1-56, Immunoglobulin heavy variable 1-56 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-56A0A0A6YXG2 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ighv1-56A0A0A6YXG2 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ighv1-56A0A0A6YXG2 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC12.46□□□□□ -0.41
Ighv1-56A0A0A6YXG2 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Ighv1-56A0A0A6YXG2 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ighv1-56A0A0A6YXG2 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Ighv1-56A0A0A6YXG2 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC12.46□□□□□ -0.41
Ighv1-56A0A0A6YXG2 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC12.46□□□□□ -0.41
Ighv1-56A0A0A6YXG2 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ighv1-56A0A0A6YXG2 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ighv1-56A0A0A6YXG2 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ighv1-56A0A0A6YXG2 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ighv1-56A0A0A6YXG2 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ighv1-56A0A0A6YXG2 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ighv1-56A0A0A6YXG2 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC12.46□□□□□ -0.42
Ighv1-56A0A0A6YXG2 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ighv1-56A0A0A6YXG2 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ighv1-56A0A0A6YXG2 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ighv1-56A0A0A6YXG2 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ighv1-56A0A0A6YXG2 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ighv1-56A0A0A6YXG2 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ighv1-56A0A0A6YXG2 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Ighv1-56A0A0A6YXG2 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ighv1-56A0A0A6YXG2 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Ighv1-56A0A0A6YXG2 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC12.45□□□□□ -0.42
Ighv1-56A0A0A6YXG2 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ighv1-56A0A0A6YXG2 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Ighv1-56A0A0A6YXG2 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ighv1-56A0A0A6YXG2 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Ighv1-56A0A0A6YXG2 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ighv1-56A0A0A6YXG2 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC12.45□□□□□ -0.42
Ighv1-56A0A0A6YXG2 Gm7860-201ENSMUST00000121190 879 ntBASIC12.45□□□□□ -0.42
Ighv1-56A0A0A6YXG2 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC12.45□□□□□ -0.42
Ighv1-56A0A0A6YXG2 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ighv1-56A0A0A6YXG2 Smad6-203ENSMUST00000179458 273 ntBASIC12.45□□□□□ -0.42
Ighv1-56A0A0A6YXG2 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Ighv1-56A0A0A6YXG2 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC12.45□□□□□ -0.42
Ighv1-56A0A0A6YXG2 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ighv1-56A0A0A6YXG2 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC12.45□□□□□ -0.42
Ighv1-56A0A0A6YXG2 Gm13241-201ENSMUST00000094493 780 ntBASIC12.45□□□□□ -0.42
Ighv1-56A0A0A6YXG2 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Ighv1-56A0A0A6YXG2 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ighv1-56A0A0A6YXG2 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Ighv1-56A0A0A6YXG2 Gm15853-202ENSMUST00000195518 2041 ntBASIC12.45□□□□□ -0.42
Ighv1-56A0A0A6YXG2 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ighv1-56A0A0A6YXG2 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ighv1-56A0A0A6YXG2 Gm37811-201ENSMUST00000192416 2601 ntBASIC12.44□□□□□ -0.42
Ighv1-56A0A0A6YXG2 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Ighv1-56A0A0A6YXG2 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC12.44□□□□□ -0.42
Ighv1-56A0A0A6YXG2 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ighv1-56A0A0A6YXG2 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ighv1-56A0A0A6YXG2 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ighv1-56A0A0A6YXG2 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ighv1-56A0A0A6YXG2 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ighv1-56A0A0A6YXG2 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ighv1-56A0A0A6YXG2 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ighv1-56A0A0A6YXG2 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC12.44□□□□□ -0.42
Ighv1-56A0A0A6YXG2 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ighv1-56A0A0A6YXG2 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ighv1-56A0A0A6YXG2 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ighv1-56A0A0A6YXG2 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ighv1-56A0A0A6YXG2 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC12.44□□□□□ -0.42
Ighv1-56A0A0A6YXG2 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ighv1-56A0A0A6YXG2 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ighv1-56A0A0A6YXG2 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ighv1-56A0A0A6YXG2 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ighv1-56A0A0A6YXG2 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ighv1-56A0A0A6YXG2 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ighv1-56A0A0A6YXG2 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ighv1-56A0A0A6YXG2 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ighv1-56A0A0A6YXG2 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ighv1-56A0A0A6YXG2 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ighv1-56A0A0A6YXG2 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ighv1-56A0A0A6YXG2 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Ighv1-56A0A0A6YXG2 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC12.43□□□□□ -0.42
Ighv1-56A0A0A6YXG2 Gm27801-201ENSMUST00000184174 223 ntBASIC12.43□□□□□ -0.42
Ighv1-56A0A0A6YXG2 Mir7075-201ENSMUST00000184187 82 ntBASIC12.43□□□□□ -0.42
Ighv1-56A0A0A6YXG2 Wdr70-203ENSMUST00000227371 1130 ntBASIC12.43□□□□□ -0.42
Ighv1-56A0A0A6YXG2 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ighv1-56A0A0A6YXG2 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ighv1-56A0A0A6YXG2 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ighv1-56A0A0A6YXG2 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Ighv1-56A0A0A6YXG2 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ighv1-56A0A0A6YXG2 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ighv1-56A0A0A6YXG2 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ighv1-56A0A0A6YXG2 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Ighv1-56A0A0A6YXG2 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ighv1-56A0A0A6YXG2 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Ighv1-56A0A0A6YXG2 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ighv1-56A0A0A6YXG2 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ighv1-56A0A0A6YXG2 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ighv1-56A0A0A6YXG2 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ighv1-56A0A0A6YXG2 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ighv1-56A0A0A6YXG2 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Ighv1-56A0A0A6YXG2 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ighv1-56A0A0A6YXG2 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ighv1-56A0A0A6YXG2 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ighv1-56A0A0A6YXG2 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ighv1-56A0A0A6YXG2 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ighv1-56A0A0A6YXG2 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms