Protein–RNA interactions for Protein: A0A0A6YWI9

Ighv1-11, Immunoglobulin heavy variable V1-11 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-11A0A0A6YWI9 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ighv1-11A0A0A6YWI9 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Ighv1-11A0A0A6YWI9 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ighv1-11A0A0A6YWI9 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Ighv1-11A0A0A6YWI9 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC13.11□□□□□ -0.31
Ighv1-11A0A0A6YWI9 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ighv1-11A0A0A6YWI9 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ighv1-11A0A0A6YWI9 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ighv1-11A0A0A6YWI9 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ighv1-11A0A0A6YWI9 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ighv1-11A0A0A6YWI9 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ighv1-11A0A0A6YWI9 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ighv1-11A0A0A6YWI9 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ighv1-11A0A0A6YWI9 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ighv1-11A0A0A6YWI9 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ighv1-11A0A0A6YWI9 Gm12251-201ENSMUST00000117893 792 ntBASIC13.11□□□□□ -0.31
Ighv1-11A0A0A6YWI9 Gm11421-201ENSMUST00000122124 294 ntBASIC13.11□□□□□ -0.31
Ighv1-11A0A0A6YWI9 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ighv1-11A0A0A6YWI9 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Ighv1-11A0A0A6YWI9 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ighv1-11A0A0A6YWI9 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ighv1-11A0A0A6YWI9 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ighv1-11A0A0A6YWI9 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC13.11□□□□□ -0.31
Ighv1-11A0A0A6YWI9 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ighv1-11A0A0A6YWI9 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ighv1-11A0A0A6YWI9 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ighv1-11A0A0A6YWI9 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ighv1-11A0A0A6YWI9 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ighv1-11A0A0A6YWI9 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ighv1-11A0A0A6YWI9 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Ighv1-11A0A0A6YWI9 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ighv1-11A0A0A6YWI9 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ighv1-11A0A0A6YWI9 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
Ighv1-11A0A0A6YWI9 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ighv1-11A0A0A6YWI9 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC13.1□□□□□ -0.31
Ighv1-11A0A0A6YWI9 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ighv1-11A0A0A6YWI9 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC13.1□□□□□ -0.31
Ighv1-11A0A0A6YWI9 Flvcr1-202ENSMUST00000191946 1216 ntBASIC13.1□□□□□ -0.31
Ighv1-11A0A0A6YWI9 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC13.1□□□□□ -0.31
Ighv1-11A0A0A6YWI9 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Ighv1-11A0A0A6YWI9 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ighv1-11A0A0A6YWI9 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ighv1-11A0A0A6YWI9 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Ighv1-11A0A0A6YWI9 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ighv1-11A0A0A6YWI9 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ighv1-11A0A0A6YWI9 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ighv1-11A0A0A6YWI9 Gm42900-201ENSMUST00000197184 2167 ntBASIC13.1□□□□□ -0.31
Ighv1-11A0A0A6YWI9 Gm43213-201ENSMUST00000151866 1790 ntBASIC13.09□□□□□ -0.31
Ighv1-11A0A0A6YWI9 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ighv1-11A0A0A6YWI9 AC165080.2-201ENSMUST00000217491 1530 ntBASIC13.09□□□□□ -0.31
Ighv1-11A0A0A6YWI9 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ighv1-11A0A0A6YWI9 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ighv1-11A0A0A6YWI9 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ighv1-11A0A0A6YWI9 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ighv1-11A0A0A6YWI9 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ighv1-11A0A0A6YWI9 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ighv1-11A0A0A6YWI9 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ighv1-11A0A0A6YWI9 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ighv1-11A0A0A6YWI9 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ighv1-11A0A0A6YWI9 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC13.09□□□□□ -0.31
Ighv1-11A0A0A6YWI9 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ighv1-11A0A0A6YWI9 Gm42939-201ENSMUST00000197514 2205 ntBASIC13.09□□□□□ -0.31
Ighv1-11A0A0A6YWI9 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ighv1-11A0A0A6YWI9 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ighv1-11A0A0A6YWI9 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ighv1-11A0A0A6YWI9 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ighv1-11A0A0A6YWI9 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ighv1-11A0A0A6YWI9 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ighv1-11A0A0A6YWI9 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ighv1-11A0A0A6YWI9 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ighv1-11A0A0A6YWI9 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ighv1-11A0A0A6YWI9 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ighv1-11A0A0A6YWI9 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.31
Ighv1-11A0A0A6YWI9 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Ighv1-11A0A0A6YWI9 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.31
Ighv1-11A0A0A6YWI9 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ighv1-11A0A0A6YWI9 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Ighv1-11A0A0A6YWI9 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ighv1-11A0A0A6YWI9 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ighv1-11A0A0A6YWI9 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ighv1-11A0A0A6YWI9 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ighv1-11A0A0A6YWI9 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
Ighv1-11A0A0A6YWI9 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ighv1-11A0A0A6YWI9 Smad6-203ENSMUST00000179458 273 ntBASIC13.08□□□□□ -0.32
Ighv1-11A0A0A6YWI9 Gm27454-201ENSMUST00000185090 204 ntBASIC13.08□□□□□ -0.32
Ighv1-11A0A0A6YWI9 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC13.08□□□□□ -0.32
Ighv1-11A0A0A6YWI9 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC13.08□□□□□ -0.32
Ighv1-11A0A0A6YWI9 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC13.08□□□□□ -0.32
Ighv1-11A0A0A6YWI9 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ighv1-11A0A0A6YWI9 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ighv1-11A0A0A6YWI9 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ighv1-11A0A0A6YWI9 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ighv1-11A0A0A6YWI9 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ighv1-11A0A0A6YWI9 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Ighv1-11A0A0A6YWI9 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ighv1-11A0A0A6YWI9 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC13.07□□□□□ -0.32
Ighv1-11A0A0A6YWI9 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ighv1-11A0A0A6YWI9 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ighv1-11A0A0A6YWI9 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Ighv1-11A0A0A6YWI9 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms