Protein–RNA interactions for Protein: A0A075B6A6

Trav6n-7, T cell receptor alpha variable 6N-7 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-7A0A075B6A6 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav6n-7A0A075B6A6 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC15.74■□□□□ 0.11
Trav6n-7A0A075B6A6 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Trav6n-7A0A075B6A6 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trav6n-7A0A075B6A6 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav6n-7A0A075B6A6 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav6n-7A0A075B6A6 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav6n-7A0A075B6A6 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC15.74■□□□□ 0.11
Trav6n-7A0A075B6A6 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC15.74■□□□□ 0.11
Trav6n-7A0A075B6A6 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC15.74■□□□□ 0.11
Trav6n-7A0A075B6A6 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Trav6n-7A0A075B6A6 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav6n-7A0A075B6A6 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC15.74■□□□□ 0.11
Trav6n-7A0A075B6A6 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC15.74■□□□□ 0.11
Trav6n-7A0A075B6A6 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Trav6n-7A0A075B6A6 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav6n-7A0A075B6A6 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC15.74■□□□□ 0.11
Trav6n-7A0A075B6A6 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav6n-7A0A075B6A6 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trav6n-7A0A075B6A6 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav6n-7A0A075B6A6 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trav6n-7A0A075B6A6 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trav6n-7A0A075B6A6 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav6n-7A0A075B6A6 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC15.73■□□□□ 0.11
Trav6n-7A0A075B6A6 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav6n-7A0A075B6A6 Gm37179-201ENSMUST00000194862 823 ntBASIC15.73■□□□□ 0.11
Trav6n-7A0A075B6A6 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC15.73■□□□□ 0.11
Trav6n-7A0A075B6A6 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC15.73■□□□□ 0.11
Trav6n-7A0A075B6A6 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC15.73■□□□□ 0.11
Trav6n-7A0A075B6A6 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav6n-7A0A075B6A6 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav6n-7A0A075B6A6 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav6n-7A0A075B6A6 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trav6n-7A0A075B6A6 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Trav6n-7A0A075B6A6 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav6n-7A0A075B6A6 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav6n-7A0A075B6A6 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav6n-7A0A075B6A6 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav6n-7A0A075B6A6 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav6n-7A0A075B6A6 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trav6n-7A0A075B6A6 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav6n-7A0A075B6A6 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Trav6n-7A0A075B6A6 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC15.72■□□□□ 0.11
Trav6n-7A0A075B6A6 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trav6n-7A0A075B6A6 Gm6365-201ENSMUST00000054711 744 ntBASIC15.72■□□□□ 0.11
Trav6n-7A0A075B6A6 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav6n-7A0A075B6A6 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav6n-7A0A075B6A6 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC15.72■□□□□ 0.11
Trav6n-7A0A075B6A6 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Trav6n-7A0A075B6A6 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Trav6n-7A0A075B6A6 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav6n-7A0A075B6A6 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trav6n-7A0A075B6A6 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC15.71■□□□□ 0.11
Trav6n-7A0A075B6A6 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC15.71■□□□□ 0.11
Trav6n-7A0A075B6A6 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC15.71■□□□□ 0.11
Trav6n-7A0A075B6A6 Gm42555-201ENSMUST00000199304 1039 ntBASIC15.71■□□□□ 0.11
Trav6n-7A0A075B6A6 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav6n-7A0A075B6A6 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav6n-7A0A075B6A6 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav6n-7A0A075B6A6 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC15.71■□□□□ 0.11
Trav6n-7A0A075B6A6 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav6n-7A0A075B6A6 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Trav6n-7A0A075B6A6 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trav6n-7A0A075B6A6 Gm9885-202ENSMUST00000186234 2209 ntBASIC15.71■□□□□ 0.1
Trav6n-7A0A075B6A6 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trav6n-7A0A075B6A6 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
Trav6n-7A0A075B6A6 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trav6n-7A0A075B6A6 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trav6n-7A0A075B6A6 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav6n-7A0A075B6A6 Gm43231-201ENSMUST00000202960 2258 ntBASIC15.7■□□□□ 0.1
Trav6n-7A0A075B6A6 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav6n-7A0A075B6A6 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav6n-7A0A075B6A6 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav6n-7A0A075B6A6 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Trav6n-7A0A075B6A6 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC15.7■□□□□ 0.1
Trav6n-7A0A075B6A6 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Trav6n-7A0A075B6A6 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
Trav6n-7A0A075B6A6 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Trav6n-7A0A075B6A6 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav6n-7A0A075B6A6 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Trav6n-7A0A075B6A6 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav6n-7A0A075B6A6 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trav6n-7A0A075B6A6 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav6n-7A0A075B6A6 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav6n-7A0A075B6A6 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav6n-7A0A075B6A6 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav6n-7A0A075B6A6 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav6n-7A0A075B6A6 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Trav6n-7A0A075B6A6 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Trav6n-7A0A075B6A6 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav6n-7A0A075B6A6 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav6n-7A0A075B6A6 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC15.69■□□□□ 0.1
Trav6n-7A0A075B6A6 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Trav6n-7A0A075B6A6 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC15.69■□□□□ 0.1
Trav6n-7A0A075B6A6 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trav6n-7A0A075B6A6 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Trav6n-7A0A075B6A6 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav6n-7A0A075B6A6 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
Trav6n-7A0A075B6A6 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav6n-7A0A075B6A6 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 56.6 ms