Protein–RNA interactions for Protein: A0A075B654

Trav3-4, T cell receptor alpha variable 3-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-4A0A075B654 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav3-4A0A075B654 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav3-4A0A075B654 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav3-4A0A075B654 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Trav3-4A0A075B654 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav3-4A0A075B654 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav3-4A0A075B654 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav3-4A0A075B654 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav3-4A0A075B654 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav3-4A0A075B654 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Trav3-4A0A075B654 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC12.5□□□□□ -0.41
Trav3-4A0A075B654 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav3-4A0A075B654 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav3-4A0A075B654 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav3-4A0A075B654 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav3-4A0A075B654 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav3-4A0A075B654 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC12.5□□□□□ -0.41
Trav3-4A0A075B654 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav3-4A0A075B654 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav3-4A0A075B654 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav3-4A0A075B654 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC12.49□□□□□ -0.41
Trav3-4A0A075B654 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav3-4A0A075B654 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav3-4A0A075B654 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav3-4A0A075B654 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav3-4A0A075B654 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav3-4A0A075B654 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav3-4A0A075B654 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav3-4A0A075B654 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav3-4A0A075B654 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC12.49□□□□□ -0.41
Trav3-4A0A075B654 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav3-4A0A075B654 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav3-4A0A075B654 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav3-4A0A075B654 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav3-4A0A075B654 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Trav3-4A0A075B654 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Trav3-4A0A075B654 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC12.49□□□□□ -0.41
Trav3-4A0A075B654 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav3-4A0A075B654 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav3-4A0A075B654 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Trav3-4A0A075B654 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav3-4A0A075B654 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav3-4A0A075B654 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav3-4A0A075B654 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Trav3-4A0A075B654 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC12.48□□□□□ -0.41
Trav3-4A0A075B654 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Trav3-4A0A075B654 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav3-4A0A075B654 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav3-4A0A075B654 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav3-4A0A075B654 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Trav3-4A0A075B654 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav3-4A0A075B654 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav3-4A0A075B654 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav3-4A0A075B654 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC12.48□□□□□ -0.41
Trav3-4A0A075B654 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Trav3-4A0A075B654 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Trav3-4A0A075B654 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav3-4A0A075B654 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav3-4A0A075B654 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav3-4A0A075B654 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav3-4A0A075B654 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav3-4A0A075B654 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav3-4A0A075B654 Gm9867-201ENSMUST00000192212 2647 ntBASIC12.47□□□□□ -0.41
Trav3-4A0A075B654 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav3-4A0A075B654 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav3-4A0A075B654 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav3-4A0A075B654 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav3-4A0A075B654 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav3-4A0A075B654 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav3-4A0A075B654 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC12.47□□□□□ -0.41
Trav3-4A0A075B654 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Trav3-4A0A075B654 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav3-4A0A075B654 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav3-4A0A075B654 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav3-4A0A075B654 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Trav3-4A0A075B654 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav3-4A0A075B654 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC12.47□□□□□ -0.41
Trav3-4A0A075B654 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav3-4A0A075B654 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav3-4A0A075B654 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav3-4A0A075B654 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Trav3-4A0A075B654 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav3-4A0A075B654 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav3-4A0A075B654 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trav3-4A0A075B654 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav3-4A0A075B654 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav3-4A0A075B654 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav3-4A0A075B654 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav3-4A0A075B654 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav3-4A0A075B654 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav3-4A0A075B654 Gm28536-201ENSMUST00000190971 1317 ntBASIC12.46□□□□□ -0.41
Trav3-4A0A075B654 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav3-4A0A075B654 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.41
Trav3-4A0A075B654 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trav3-4A0A075B654 Gm9806-201ENSMUST00000051080 552 ntBASIC12.46□□□□□ -0.41
Trav3-4A0A075B654 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav3-4A0A075B654 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Trav3-4A0A075B654 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav3-4A0A075B654 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav3-4A0A075B654 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms