Protein–RNA interactions for Protein: A0A075B649

Trav13-2, T cell receptor alpha variable 13-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-2A0A075B649 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav13-2A0A075B649 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav13-2A0A075B649 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav13-2A0A075B649 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav13-2A0A075B649 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC12.46□□□□□ -0.41
Trav13-2A0A075B649 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trav13-2A0A075B649 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trav13-2A0A075B649 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav13-2A0A075B649 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Trav13-2A0A075B649 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav13-2A0A075B649 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav13-2A0A075B649 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav13-2A0A075B649 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Trav13-2A0A075B649 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav13-2A0A075B649 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav13-2A0A075B649 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav13-2A0A075B649 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC12.46□□□□□ -0.42
Trav13-2A0A075B649 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav13-2A0A075B649 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav13-2A0A075B649 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav13-2A0A075B649 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC12.45□□□□□ -0.42
Trav13-2A0A075B649 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav13-2A0A075B649 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav13-2A0A075B649 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC12.45□□□□□ -0.42
Trav13-2A0A075B649 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav13-2A0A075B649 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav13-2A0A075B649 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav13-2A0A075B649 Gm15546-201ENSMUST00000122095 826 ntBASIC12.45□□□□□ -0.42
Trav13-2A0A075B649 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Trav13-2A0A075B649 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav13-2A0A075B649 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Trav13-2A0A075B649 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav13-2A0A075B649 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav13-2A0A075B649 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav13-2A0A075B649 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC12.45□□□□□ -0.42
Trav13-2A0A075B649 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav13-2A0A075B649 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav13-2A0A075B649 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav13-2A0A075B649 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav13-2A0A075B649 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Trav13-2A0A075B649 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav13-2A0A075B649 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav13-2A0A075B649 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav13-2A0A075B649 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav13-2A0A075B649 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav13-2A0A075B649 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav13-2A0A075B649 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC12.44□□□□□ -0.42
Trav13-2A0A075B649 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav13-2A0A075B649 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Trav13-2A0A075B649 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav13-2A0A075B649 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav13-2A0A075B649 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav13-2A0A075B649 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Trav13-2A0A075B649 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav13-2A0A075B649 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav13-2A0A075B649 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav13-2A0A075B649 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC12.44□□□□□ -0.42
Trav13-2A0A075B649 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC12.44□□□□□ -0.42
Trav13-2A0A075B649 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav13-2A0A075B649 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC12.44□□□□□ -0.42
Trav13-2A0A075B649 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC12.44□□□□□ -0.42
Trav13-2A0A075B649 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC12.44□□□□□ -0.42
Trav13-2A0A075B649 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC12.44□□□□□ -0.42
Trav13-2A0A075B649 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC12.44□□□□□ -0.42
Trav13-2A0A075B649 Gm9959-201ENSMUST00000068277 390 ntBASIC12.44□□□□□ -0.42
Trav13-2A0A075B649 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav13-2A0A075B649 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Trav13-2A0A075B649 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav13-2A0A075B649 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav13-2A0A075B649 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav13-2A0A075B649 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC12.43□□□□□ -0.42
Trav13-2A0A075B649 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav13-2A0A075B649 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav13-2A0A075B649 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav13-2A0A075B649 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav13-2A0A075B649 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav13-2A0A075B649 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav13-2A0A075B649 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Trav13-2A0A075B649 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Trav13-2A0A075B649 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav13-2A0A075B649 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav13-2A0A075B649 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav13-2A0A075B649 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC12.43□□□□□ -0.42
Trav13-2A0A075B649 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC12.43□□□□□ -0.42
Trav13-2A0A075B649 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav13-2A0A075B649 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav13-2A0A075B649 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav13-2A0A075B649 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav13-2A0A075B649 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav13-2A0A075B649 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav13-2A0A075B649 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav13-2A0A075B649 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav13-2A0A075B649 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC12.43□□□□□ -0.42
Trav13-2A0A075B649 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav13-2A0A075B649 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav13-2A0A075B649 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav13-2A0A075B649 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav13-2A0A075B649 Gm42939-201ENSMUST00000197514 2205 ntBASIC12.42□□□□□ -0.42
Trav13-2A0A075B649 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav13-2A0A075B649 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms