Protein–RNA interactions for Protein: A0A075B648

Trav12-3, T cell receptor alpha variable 12-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-3A0A075B648 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav12-3A0A075B648 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav12-3A0A075B648 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav12-3A0A075B648 AC151971.4-201ENSMUST00000214717 704 ntBASIC13.55□□□□□ -0.24
Trav12-3A0A075B648 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav12-3A0A075B648 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav12-3A0A075B648 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav12-3A0A075B648 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav12-3A0A075B648 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav12-3A0A075B648 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Trav12-3A0A075B648 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav12-3A0A075B648 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav12-3A0A075B648 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav12-3A0A075B648 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav12-3A0A075B648 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav12-3A0A075B648 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC13.54□□□□□ -0.24
Trav12-3A0A075B648 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav12-3A0A075B648 Gm9939-201ENSMUST00000067161 1154 ntBASIC13.54□□□□□ -0.24
Trav12-3A0A075B648 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav12-3A0A075B648 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav12-3A0A075B648 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav12-3A0A075B648 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav12-3A0A075B648 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav12-3A0A075B648 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav12-3A0A075B648 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav12-3A0A075B648 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav12-3A0A075B648 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav12-3A0A075B648 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav12-3A0A075B648 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav12-3A0A075B648 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav12-3A0A075B648 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav12-3A0A075B648 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Trav12-3A0A075B648 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav12-3A0A075B648 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Trav12-3A0A075B648 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav12-3A0A075B648 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav12-3A0A075B648 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC13.53□□□□□ -0.24
Trav12-3A0A075B648 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Trav12-3A0A075B648 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav12-3A0A075B648 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav12-3A0A075B648 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav12-3A0A075B648 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav12-3A0A075B648 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav12-3A0A075B648 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav12-3A0A075B648 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav12-3A0A075B648 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav12-3A0A075B648 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav12-3A0A075B648 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav12-3A0A075B648 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav12-3A0A075B648 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav12-3A0A075B648 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav12-3A0A075B648 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav12-3A0A075B648 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Trav12-3A0A075B648 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav12-3A0A075B648 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav12-3A0A075B648 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav12-3A0A075B648 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC13.52□□□□□ -0.24
Trav12-3A0A075B648 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav12-3A0A075B648 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav12-3A0A075B648 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC13.52□□□□□ -0.24
Trav12-3A0A075B648 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav12-3A0A075B648 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav12-3A0A075B648 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav12-3A0A075B648 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav12-3A0A075B648 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav12-3A0A075B648 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav12-3A0A075B648 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav12-3A0A075B648 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
Trav12-3A0A075B648 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav12-3A0A075B648 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav12-3A0A075B648 Gm45774-201ENSMUST00000211992 2665 ntBASIC13.52□□□□□ -0.25
Trav12-3A0A075B648 CT010478.1-201ENSMUST00000220747 2787 ntBASIC13.52□□□□□ -0.25
Trav12-3A0A075B648 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav12-3A0A075B648 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav12-3A0A075B648 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Trav12-3A0A075B648 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav12-3A0A075B648 Shroom3-211ENSMUST00000225438 5742 ntBASIC13.52□□□□□ -0.25
Trav12-3A0A075B648 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav12-3A0A075B648 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC13.51□□□□□ -0.25
Trav12-3A0A075B648 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav12-3A0A075B648 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Trav12-3A0A075B648 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav12-3A0A075B648 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC13.51□□□□□ -0.25
Trav12-3A0A075B648 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav12-3A0A075B648 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav12-3A0A075B648 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav12-3A0A075B648 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav12-3A0A075B648 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav12-3A0A075B648 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC13.51□□□□□ -0.25
Trav12-3A0A075B648 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC13.51□□□□□ -0.25
Trav12-3A0A075B648 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav12-3A0A075B648 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav12-3A0A075B648 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav12-3A0A075B648 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav12-3A0A075B648 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav12-3A0A075B648 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav12-3A0A075B648 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav12-3A0A075B648 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav12-3A0A075B648 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav12-3A0A075B648 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms