Protein–RNA interactions for Protein: A0A075B634

Trav16n, T cell receptor alpha variable 16n, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16nA0A075B634 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav16nA0A075B634 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav16nA0A075B634 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trav16nA0A075B634 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav16nA0A075B634 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav16nA0A075B634 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trav16nA0A075B634 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trav16nA0A075B634 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC14.02□□□□□ -0.17
Trav16nA0A075B634 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC14.02□□□□□ -0.17
Trav16nA0A075B634 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trav16nA0A075B634 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Trav16nA0A075B634 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav16nA0A075B634 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav16nA0A075B634 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trav16nA0A075B634 Dmtn-207ENSMUST00000228001 2437 ntBASIC14.02□□□□□ -0.17
Trav16nA0A075B634 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
Trav16nA0A075B634 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav16nA0A075B634 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trav16nA0A075B634 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trav16nA0A075B634 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Trav16nA0A075B634 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav16nA0A075B634 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Trav16nA0A075B634 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav16nA0A075B634 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav16nA0A075B634 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trav16nA0A075B634 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC14.01□□□□□ -0.17
Trav16nA0A075B634 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav16nA0A075B634 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC14.01□□□□□ -0.17
Trav16nA0A075B634 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trav16nA0A075B634 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav16nA0A075B634 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav16nA0A075B634 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav16nA0A075B634 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav16nA0A075B634 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav16nA0A075B634 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav16nA0A075B634 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC14.01□□□□□ -0.17
Trav16nA0A075B634 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav16nA0A075B634 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC14.01□□□□□ -0.17
Trav16nA0A075B634 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Trav16nA0A075B634 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav16nA0A075B634 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav16nA0A075B634 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Trav16nA0A075B634 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav16nA0A075B634 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav16nA0A075B634 Gm22238-201ENSMUST00000175222 88 ntBASIC14□□□□□ -0.17
Trav16nA0A075B634 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Trav16nA0A075B634 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Trav16nA0A075B634 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Trav16nA0A075B634 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Trav16nA0A075B634 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trav16nA0A075B634 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Trav16nA0A075B634 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trav16nA0A075B634 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trav16nA0A075B634 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Trav16nA0A075B634 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trav16nA0A075B634 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav16nA0A075B634 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trav16nA0A075B634 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav16nA0A075B634 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Trav16nA0A075B634 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav16nA0A075B634 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav16nA0A075B634 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav16nA0A075B634 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav16nA0A075B634 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC13.99□□□□□ -0.17
Trav16nA0A075B634 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav16nA0A075B634 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav16nA0A075B634 Gm10209-201ENSMUST00000203397 1607 ntBASIC13.99□□□□□ -0.17
Trav16nA0A075B634 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trav16nA0A075B634 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Trav16nA0A075B634 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav16nA0A075B634 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Trav16nA0A075B634 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav16nA0A075B634 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trav16nA0A075B634 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trav16nA0A075B634 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav16nA0A075B634 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Trav16nA0A075B634 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav16nA0A075B634 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav16nA0A075B634 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav16nA0A075B634 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav16nA0A075B634 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav16nA0A075B634 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav16nA0A075B634 Ddx41-204ENSMUST00000224765 2199 ntBASIC13.98□□□□□ -0.17
Trav16nA0A075B634 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC13.98□□□□□ -0.17
Trav16nA0A075B634 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC13.98□□□□□ -0.17
Trav16nA0A075B634 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC13.98□□□□□ -0.17
Trav16nA0A075B634 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav16nA0A075B634 Gm5522-201ENSMUST00000189483 1242 ntBASIC13.98□□□□□ -0.17
Trav16nA0A075B634 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav16nA0A075B634 Gm42922-201ENSMUST00000195887 2078 ntBASIC13.98□□□□□ -0.17
Trav16nA0A075B634 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC13.98□□□□□ -0.17
Trav16nA0A075B634 Gm43213-201ENSMUST00000151866 1790 ntBASIC13.98□□□□□ -0.17
Trav16nA0A075B634 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav16nA0A075B634 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav16nA0A075B634 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav16nA0A075B634 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Trav16nA0A075B634 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav16nA0A075B634 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trav16nA0A075B634 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav16nA0A075B634 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms