Protein–RNA interactions for Protein: A0A075B604

Trav7n-5, T cell receptor alpha variable 7D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-5A0A075B604 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
Trav7n-5A0A075B604 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav7n-5A0A075B604 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav7n-5A0A075B604 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav7n-5A0A075B604 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav7n-5A0A075B604 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav7n-5A0A075B604 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav7n-5A0A075B604 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav7n-5A0A075B604 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav7n-5A0A075B604 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Trav7n-5A0A075B604 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav7n-5A0A075B604 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trav7n-5A0A075B604 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav7n-5A0A075B604 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav7n-5A0A075B604 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Trav7n-5A0A075B604 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trav7n-5A0A075B604 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trav7n-5A0A075B604 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC15.19■□□□□ 0.02
Trav7n-5A0A075B604 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Trav7n-5A0A075B604 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trav7n-5A0A075B604 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC15.19■□□□□ 0.02
Trav7n-5A0A075B604 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trav7n-5A0A075B604 Gm3807-201ENSMUST00000193520 1168 ntBASIC15.19■□□□□ 0.02
Trav7n-5A0A075B604 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav7n-5A0A075B604 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Trav7n-5A0A075B604 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trav7n-5A0A075B604 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav7n-5A0A075B604 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav7n-5A0A075B604 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC15.19■□□□□ 0.02
Trav7n-5A0A075B604 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav7n-5A0A075B604 Gm13509-201ENSMUST00000119733 1308 ntBASIC15.18■□□□□ 0.02
Trav7n-5A0A075B604 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav7n-5A0A075B604 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav7n-5A0A075B604 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav7n-5A0A075B604 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav7n-5A0A075B604 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav7n-5A0A075B604 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav7n-5A0A075B604 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav7n-5A0A075B604 Gm7856-201ENSMUST00000117514 1493 ntBASIC15.18■□□□□ 0.02
Trav7n-5A0A075B604 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trav7n-5A0A075B604 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav7n-5A0A075B604 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav7n-5A0A075B604 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav7n-5A0A075B604 Gm8309-201ENSMUST00000206627 1448 ntBASIC15.17■□□□□ 0.02
Trav7n-5A0A075B604 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav7n-5A0A075B604 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav7n-5A0A075B604 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Trav7n-5A0A075B604 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trav7n-5A0A075B604 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav7n-5A0A075B604 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav7n-5A0A075B604 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trav7n-5A0A075B604 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav7n-5A0A075B604 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC15.17■□□□□ 0.02
Trav7n-5A0A075B604 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trav7n-5A0A075B604 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Trav7n-5A0A075B604 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav7n-5A0A075B604 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Trav7n-5A0A075B604 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav7n-5A0A075B604 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav7n-5A0A075B604 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav7n-5A0A075B604 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trav7n-5A0A075B604 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav7n-5A0A075B604 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav7n-5A0A075B604 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav7n-5A0A075B604 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC15.16■□□□□ 0.02
Trav7n-5A0A075B604 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav7n-5A0A075B604 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
Trav7n-5A0A075B604 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav7n-5A0A075B604 Gm10616-201ENSMUST00000205285 2127 ntBASIC15.16■□□□□ 0.02
Trav7n-5A0A075B604 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav7n-5A0A075B604 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Trav7n-5A0A075B604 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC15.16■□□□□ 0.02
Trav7n-5A0A075B604 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav7n-5A0A075B604 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav7n-5A0A075B604 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav7n-5A0A075B604 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav7n-5A0A075B604 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav7n-5A0A075B604 Gm13148-201ENSMUST00000118892 745 ntBASIC15.16■□□□□ 0.02
Trav7n-5A0A075B604 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC15.16■□□□□ 0.02
Trav7n-5A0A075B604 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Trav7n-5A0A075B604 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trav7n-5A0A075B604 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Trav7n-5A0A075B604 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Trav7n-5A0A075B604 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav7n-5A0A075B604 Gm43672-201ENSMUST00000199072 1731 ntBASIC15.16■□□□□ 0.02
Trav7n-5A0A075B604 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav7n-5A0A075B604 Gm37563-201ENSMUST00000192580 1513 ntBASIC15.16■□□□□ 0.02
Trav7n-5A0A075B604 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav7n-5A0A075B604 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav7n-5A0A075B604 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Trav7n-5A0A075B604 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC15.16■□□□□ 0.02
Trav7n-5A0A075B604 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav7n-5A0A075B604 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav7n-5A0A075B604 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC15.15■□□□□ 0.02
Trav7n-5A0A075B604 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav7n-5A0A075B604 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Trav7n-5A0A075B604 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav7n-5A0A075B604 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trav7n-5A0A075B604 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav7n-5A0A075B604 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 70.1 ms