Protein–RNA interactions for Protein: A0A075B603

Trav6-6, T cell receptor alpha variable 6-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-6A0A075B603 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6-6A0A075B603 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6-6A0A075B603 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC13.8□□□□□ -0.2
Trav6-6A0A075B603 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6-6A0A075B603 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
Trav6-6A0A075B603 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6-6A0A075B603 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6-6A0A075B603 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6-6A0A075B603 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6-6A0A075B603 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6-6A0A075B603 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav6-6A0A075B603 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav6-6A0A075B603 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav6-6A0A075B603 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav6-6A0A075B603 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav6-6A0A075B603 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
Trav6-6A0A075B603 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav6-6A0A075B603 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav6-6A0A075B603 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Trav6-6A0A075B603 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav6-6A0A075B603 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trav6-6A0A075B603 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trav6-6A0A075B603 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trav6-6A0A075B603 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Trav6-6A0A075B603 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC13.79□□□□□ -0.2
Trav6-6A0A075B603 Gm9207-201ENSMUST00000198773 1115 ntBASIC13.79□□□□□ -0.2
Trav6-6A0A075B603 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trav6-6A0A075B603 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav6-6A0A075B603 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Trav6-6A0A075B603 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Trav6-6A0A075B603 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav6-6A0A075B603 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Trav6-6A0A075B603 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav6-6A0A075B603 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Trav6-6A0A075B603 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Trav6-6A0A075B603 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav6-6A0A075B603 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav6-6A0A075B603 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav6-6A0A075B603 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Trav6-6A0A075B603 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trav6-6A0A075B603 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trav6-6A0A075B603 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trav6-6A0A075B603 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC13.78□□□□□ -0.2
Trav6-6A0A075B603 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav6-6A0A075B603 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav6-6A0A075B603 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Trav6-6A0A075B603 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav6-6A0A075B603 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav6-6A0A075B603 Gm10209-201ENSMUST00000203397 1607 ntBASIC13.78□□□□□ -0.2
Trav6-6A0A075B603 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trav6-6A0A075B603 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav6-6A0A075B603 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Trav6-6A0A075B603 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Trav6-6A0A075B603 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
Trav6-6A0A075B603 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.21
Trav6-6A0A075B603 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav6-6A0A075B603 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC13.77□□□□□ -0.21
Trav6-6A0A075B603 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC13.77□□□□□ -0.21
Trav6-6A0A075B603 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav6-6A0A075B603 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC13.77□□□□□ -0.21
Trav6-6A0A075B603 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC13.77□□□□□ -0.21
Trav6-6A0A075B603 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav6-6A0A075B603 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav6-6A0A075B603 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav6-6A0A075B603 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav6-6A0A075B603 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav6-6A0A075B603 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav6-6A0A075B603 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav6-6A0A075B603 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav6-6A0A075B603 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav6-6A0A075B603 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav6-6A0A075B603 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav6-6A0A075B603 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav6-6A0A075B603 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trav6-6A0A075B603 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav6-6A0A075B603 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav6-6A0A075B603 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav6-6A0A075B603 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav6-6A0A075B603 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC13.76□□□□□ -0.21
Trav6-6A0A075B603 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav6-6A0A075B603 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC13.76□□□□□ -0.21
Trav6-6A0A075B603 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav6-6A0A075B603 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav6-6A0A075B603 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav6-6A0A075B603 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav6-6A0A075B603 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav6-6A0A075B603 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav6-6A0A075B603 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
Trav6-6A0A075B603 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav6-6A0A075B603 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trav6-6A0A075B603 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav6-6A0A075B603 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav6-6A0A075B603 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav6-6A0A075B603 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav6-6A0A075B603 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav6-6A0A075B603 Cxcl14-202ENSMUST00000224801 1467 ntBASIC13.75□□□□□ -0.21
Trav6-6A0A075B603 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav6-6A0A075B603 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Trav6-6A0A075B603 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Trav6-6A0A075B603 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms