Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Gm11961-201ENSMUST00000135775 1319 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Cstf3Q99LI7 Gm340-201ENSMUST00000172371 3729 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
Cstf3Q99LI7 Eps15-201ENSMUST00000030281 2980 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Cstf3Q99LI7 Mstn-201ENSMUST00000027269 2705 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Cstf3Q99LI7 Pik3r3-201ENSMUST00000030464 5257 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Cstf3Q99LI7 H3f3a-ps1-201ENSMUST00000119546 410 ntBASIC7.34□□□□□ -1.23
Cstf3Q99LI7 Gm12583-201ENSMUST00000120677 853 ntBASIC7.34□□□□□ -1.23
Cstf3Q99LI7 Bambi-ps1-201ENSMUST00000121525 592 ntBASIC7.34□□□□□ -1.23
Cstf3Q99LI7 Gm11588-201ENSMUST00000141758 658 ntTSL 5 BASIC7.34□□□□□ -1.23
Cstf3Q99LI7 Gm13012-202ENSMUST00000155349 849 ntTSL 2 BASIC7.34□□□□□ -1.23
Cstf3Q99LI7 Gm10012-202ENSMUST00000170379 372 ntBASIC7.34□□□□□ -1.23
Cstf3Q99LI7 n-R5s115-201ENSMUST00000179019 119 ntBASIC7.34□□□□□ -1.23
Cstf3Q99LI7 Tcrg-C4-201ENSMUST00000179181 985 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
Cstf3Q99LI7 Scgb1b25-ps-201ENSMUST00000186419 415 ntBASIC7.34□□□□□ -1.23
Cstf3Q99LI7 I830127L07Rik-201ENSMUST00000187250 730 ntTSL 5 BASIC7.34□□□□□ -1.23
Cstf3Q99LI7 1700096J18Rik-201ENSMUST00000190043 482 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Cstf3Q99LI7 Gm36241-201ENSMUST00000201085 493 ntTSL 3 BASIC7.34□□□□□ -1.23
Cstf3Q99LI7 Ube2n-ps1-201ENSMUST00000201768 459 ntBASIC7.34□□□□□ -1.23
Cstf3Q99LI7 Gm19172-201ENSMUST00000203170 1246 ntBASIC7.34□□□□□ -1.23
Cstf3Q99LI7 Gm45145-203ENSMUST00000208872 958 ntTSL 5 BASIC7.34□□□□□ -1.23
Cstf3Q99LI7 Gm32842-201ENSMUST00000212653 738 ntBASIC7.34□□□□□ -1.23
Cstf3Q99LI7 AC166078.1-201ENSMUST00000217211 584 ntTSL 2 BASIC7.34□□□□□ -1.23
Cstf3Q99LI7 Gm9249-201ENSMUST00000221420 578 ntBASIC7.34□□□□□ -1.23
Cstf3Q99LI7 AC133189.3-201ENSMUST00000226269 878 ntBASIC7.34□□□□□ -1.23
Cstf3Q99LI7 Slurp1-201ENSMUST00000023261 567 ntTSL 5 BASIC7.34□□□□□ -1.23
Cstf3Q99LI7 Tmem225-201ENSMUST00000046333 993 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Cstf3Q99LI7 n-R5s193-201ENSMUST00000082864 109 ntBASIC7.34□□□□□ -1.23
Cstf3Q99LI7 Ankef1-202ENSMUST00000121717 2875 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Cstf3Q99LI7 4930563E22Rik-201ENSMUST00000066087 3313 ntBASIC7.34□□□□□ -1.23
Cstf3Q99LI7 Clcn7-204ENSMUST00000160961 3983 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Cstf3Q99LI7 Adcy10-203ENSMUST00000111440 5078 ntAPPRIS ALT2 TSL 5 BASIC7.34□□□□□ -1.23
Cstf3Q99LI7 Scd3-201ENSMUST00000026220 3470 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Cstf3Q99LI7 Gm32305-201ENSMUST00000221742 1899 ntTSL 5 BASIC7.34□□□□□ -1.23
Cstf3Q99LI7 Tcf4-202ENSMUST00000078486 7147 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
Cstf3Q99LI7 Gm38302-201ENSMUST00000191676 2076 ntBASIC7.34□□□□□ -1.23
Cstf3Q99LI7 Pknox2-207ENSMUST00000177218 3393 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Cstf3Q99LI7 Ect2-207ENSMUST00000176242 3985 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.24
Cstf3Q99LI7 Gas2l3-202ENSMUST00000105298 6305 ntAPPRIS P2 TSL 1 (best) BASIC7.34□□□□□ -1.24
Cstf3Q99LI7 Cast-207ENSMUST00000222588 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.24
Cstf3Q99LI7 Trim12a-202ENSMUST00000106837 1389 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
Cstf3Q99LI7 Tmem27-202ENSMUST00000112280 1389 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
Cstf3Q99LI7 Zfp770-201ENSMUST00000050668 4300 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Cstf3Q99LI7 AC159264.1-201ENSMUST00000224844 4257 ntBASIC7.33□□□□□ -1.24
Cstf3Q99LI7 Gm3883-201ENSMUST00000098119 3229 ntBASIC7.33□□□□□ -1.24
Cstf3Q99LI7 Cd44-208ENSMUST00000111198 1981 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.24
Cstf3Q99LI7 Slu7-201ENSMUST00000020681 3625 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Cstf3Q99LI7 Sos2-203ENSMUST00000182396 3963 ntTSL 5 BASIC7.33□□□□□ -1.24
Cstf3Q99LI7 Lhx9-203ENSMUST00000093486 4551 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Cstf3Q99LI7 AC153945.1-201ENSMUST00000217761 1722 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Cstf3Q99LI7 Dnah11-201ENSMUST00000084806 14072 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Cstf3Q99LI7 Pds5b-202ENSMUST00000038900 7315 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
Cstf3Q99LI7 Mptx2-201ENSMUST00000111224 794 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
Cstf3Q99LI7 Gm11207-201ENSMUST00000117824 414 ntBASIC7.33□□□□□ -1.24
Cstf3Q99LI7 Gm4918-201ENSMUST00000119420 1084 ntBASIC7.33□□□□□ -1.24
Cstf3Q99LI7 Gm11474-201ENSMUST00000120814 277 ntBASIC7.33□□□□□ -1.24
Cstf3Q99LI7 Gm14830-201ENSMUST00000121899 700 ntBASIC7.33□□□□□ -1.24
Cstf3Q99LI7 Gm12967-201ENSMUST00000122147 289 ntBASIC7.33□□□□□ -1.24
Cstf3Q99LI7 Gm24994-201ENSMUST00000157414 121 ntBASIC7.33□□□□□ -1.24
Cstf3Q99LI7 Il21-202ENSMUST00000161015 529 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.24
Cstf3Q99LI7 Gm16573-203ENSMUST00000162231 807 ntTSL 2 BASIC7.33□□□□□ -1.24
Cstf3Q99LI7 Gm26269-201ENSMUST00000180144 126 ntBASIC7.33□□□□□ -1.24
Cstf3Q99LI7 Rnf170-ps-201ENSMUST00000181188 859 ntBASIC7.33□□□□□ -1.24
Cstf3Q99LI7 Gm26784-201ENSMUST00000181666 410 ntBASIC7.33□□□□□ -1.24
Cstf3Q99LI7 1700021A07Rik-202ENSMUST00000187763 485 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Cstf3Q99LI7 Gm28622-201ENSMUST00000189842 507 ntTSL 5 BASIC7.33□□□□□ -1.24
Cstf3Q99LI7 Ms4a10-203ENSMUST00000191343 862 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Cstf3Q99LI7 Gm19254-201ENSMUST00000204828 294 ntBASIC7.33□□□□□ -1.24
Cstf3Q99LI7 Gm33926-201ENSMUST00000208755 357 ntTSL 2 BASIC7.33□□□□□ -1.24
Cstf3Q99LI7 9530078K11Rik-201ENSMUST00000208883 694 ntBASIC7.33□□□□□ -1.24
Cstf3Q99LI7 Gm33096-201ENSMUST00000210189 493 ntBASIC7.33□□□□□ -1.24
Cstf3Q99LI7 Spaca7-203ENSMUST00000210276 715 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
Cstf3Q99LI7 AC153845.1-201ENSMUST00000213596 428 ntBASIC7.33□□□□□ -1.24
Cstf3Q99LI7 AC092710.1-201ENSMUST00000221005 192 ntBASIC7.33□□□□□ -1.24
Cstf3Q99LI7 CT010480.3-201ENSMUST00000224712 259 ntBASIC7.33□□□□□ -1.24
Cstf3Q99LI7 AV026068-225ENSMUST00000225042 490 ntBASIC7.33□□□□□ -1.24
Cstf3Q99LI7 AC129017.2-201ENSMUST00000226118 1284 ntBASIC7.33□□□□□ -1.24
Cstf3Q99LI7 AC154757.2-201ENSMUST00000228885 743 ntBASIC7.33□□□□□ -1.24
Cstf3Q99LI7 Olfr139-201ENSMUST00000050678 948 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
Cstf3Q99LI7 Ms4a10-201ENSMUST00000072748 1011 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Cstf3Q99LI7 Vmn1r198-204ENSMUST00000227167 5990 ntAPPRIS ALT2 BASIC7.33□□□□□ -1.24
Cstf3Q99LI7 Cd84-203ENSMUST00000135386 3434 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.24
Cstf3Q99LI7 Zfp729a-201ENSMUST00000012314 9455 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Cstf3Q99LI7 Jcad-201ENSMUST00000037029 6730 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
Cstf3Q99LI7 Chd9-205ENSMUST00000209423 9419 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.24
Cstf3Q99LI7 Arhgap12-208ENSMUST00000182213 4162 ntAPPRIS ALT1 TSL 5 BASIC7.33□□□□□ -1.24
Cstf3Q99LI7 Olfr43-202ENSMUST00000205664 2018 ntAPPRIS P1 TSL 3 BASIC7.33□□□□□ -1.24
Cstf3Q99LI7 Gm42514-201ENSMUST00000196636 1832 ntBASIC7.33□□□□□ -1.24
Cstf3Q99LI7 Olfr1320-203ENSMUST00000214375 1831 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
Cstf3Q99LI7 Pogz-203ENSMUST00000107266 4100 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
Cstf3Q99LI7 Gm7961-201ENSMUST00000201338 1436 ntBASIC7.33□□□□□ -1.24
Cstf3Q99LI7 Spire1-201ENSMUST00000045105 5033 ntAPPRIS P2 TSL 5 BASIC7.33□□□□□ -1.24
Cstf3Q99LI7 Dsc3-203ENSMUST00000225110 3123 ntAPPRIS P2 BASIC7.33□□□□□ -1.24
Cstf3Q99LI7 F13a1-202ENSMUST00000164727 3854 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Cstf3Q99LI7 Mkks-201ENSMUST00000028730 2935 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Cstf3Q99LI7 Marf1-201ENSMUST00000090300 7765 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
Cstf3Q99LI7 Bdnf-207ENSMUST00000111047 4042 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Cstf3Q99LI7 Vps39-202ENSMUST00000102501 4384 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Cstf3Q99LI7 Celf2-204ENSMUST00000114924 8738 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Cstf3Q99LI7 5530400K19Rik-201ENSMUST00000193511 1916 ntBASIC7.33□□□□□ -1.24
Cstf3Q99LI7 Gm42771-201ENSMUST00000198342 2486 ntBASIC7.33□□□□□ -1.24
Retrieved 100 of 76,532 protein–RNA pairs in 77.7 ms