Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 4933424H11Rik-201ENSMUST00000200511 2018 ntBASIC7.77□□□□□ -1.17
Trub1Q8C0D0 Calcr-205ENSMUST00000171613 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.17
Trub1Q8C0D0 Dock8-201ENSMUST00000025831 7810 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Trub1Q8C0D0 Casr-203ENSMUST00000172826 3659 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
Trub1Q8C0D0 Pknox2-207ENSMUST00000177218 3393 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Trub1Q8C0D0 Itpr2-202ENSMUST00000079573 11679 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Trub1Q8C0D0 Sla-202ENSMUST00000164163 2952 ntAPPRIS P3 TSL 5 BASIC7.77□□□□□ -1.17
Trub1Q8C0D0 Btn2a2-201ENSMUST00000041541 2226 ntTSL 2 BASIC7.76□□□□□ -1.17
Trub1Q8C0D0 Inpp5d-208ENSMUST00000167032 4125 ntTSL 2 BASIC7.76□□□□□ -1.17
Trub1Q8C0D0 Gm2654-201ENSMUST00000221381 1592 ntBASIC7.76□□□□□ -1.17
Trub1Q8C0D0 Casp8-202ENSMUST00000165549 1917 ntAPPRIS P3 TSL 1 (best) BASIC7.76□□□□□ -1.17
Trub1Q8C0D0 Rnase4-202ENSMUST00000169895 1460 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Trub1Q8C0D0 4833427F10Rik-201ENSMUST00000172874 1475 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Trub1Q8C0D0 Ankef1-210ENSMUST00000180246 2726 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
Trub1Q8C0D0 Ryr2-202ENSMUST00000170156 16813 ntAPPRIS ALT2 TSL 5 BASIC7.76□□□□□ -1.17
Trub1Q8C0D0 Ryr2-201ENSMUST00000021750 16814 ntAPPRIS P2 TSL 1 (best) BASIC7.76□□□□□ -1.17
Trub1Q8C0D0 Kif24-202ENSMUST00000108055 5593 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Trub1Q8C0D0 Samd3-206ENSMUST00000220219 1744 ntAPPRIS P4 TSL 5 BASIC7.76□□□□□ -1.17
Trub1Q8C0D0 Slc4a4-208ENSMUST00000156238 3494 ntAPPRIS ALT2 TSL 5 BASIC7.76□□□□□ -1.17
Trub1Q8C0D0 AC158986.1-201ENSMUST00000228391 3455 ntBASIC7.76□□□□□ -1.17
Trub1Q8C0D0 Mir669e-201ENSMUST00000117003 119 ntBASIC7.76□□□□□ -1.17
Trub1Q8C0D0 Gm14746-201ENSMUST00000120309 741 ntBASIC7.76□□□□□ -1.17
Trub1Q8C0D0 Gm12593-201ENSMUST00000120981 743 ntBASIC7.76□□□□□ -1.17
Trub1Q8C0D0 BC002163-201ENSMUST00000121906 319 ntBASIC7.76□□□□□ -1.17
Trub1Q8C0D0 Gm15845-201ENSMUST00000130244 996 ntTSL 2 BASIC7.76□□□□□ -1.17
Trub1Q8C0D0 Gm13017-201ENSMUST00000156409 400 ntTSL 3 BASIC7.76□□□□□ -1.17
Trub1Q8C0D0 Gm24883-201ENSMUST00000158391 281 ntBASIC7.76□□□□□ -1.17
Trub1Q8C0D0 Gm17097-201ENSMUST00000166414 714 ntBASIC7.76□□□□□ -1.17
Trub1Q8C0D0 Smarca2-213ENSMUST00000176698 955 ntTSL 5 BASIC7.76□□□□□ -1.17
Trub1Q8C0D0 Rps19-ps6-201ENSMUST00000181233 438 ntBASIC7.76□□□□□ -1.17
Trub1Q8C0D0 1700030F04Rik-202ENSMUST00000188781 617 ntTSL 5 BASIC7.76□□□□□ -1.17
Trub1Q8C0D0 Gm18765-201ENSMUST00000203166 660 ntBASIC7.76□□□□□ -1.17
Trub1Q8C0D0 Smarcad1-215ENSMUST00000205118 600 ntTSL 2 BASIC7.76□□□□□ -1.17
Trub1Q8C0D0 Pafah1b1-ps2-201ENSMUST00000207209 1223 ntBASIC7.76□□□□□ -1.17
Trub1Q8C0D0 Gm44786-201ENSMUST00000208165 1008 ntTSL 5 BASIC7.76□□□□□ -1.17
Trub1Q8C0D0 AC102689.1-201ENSMUST00000220511 1090 ntBASIC7.76□□□□□ -1.17
Trub1Q8C0D0 AC163038.4-201ENSMUST00000224942 474 ntBASIC7.76□□□□□ -1.17
Trub1Q8C0D0 Oosp1-201ENSMUST00000048214 972 ntAPPRIS P2 TSL 1 (best) BASIC7.76□□□□□ -1.17
Trub1Q8C0D0 Olfr1032-201ENSMUST00000062166 933 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
Trub1Q8C0D0 Klrk1-202ENSMUST00000095412 1019 ntAPPRIS ALT2 TSL 1 (best) BASIC7.76□□□□□ -1.17
Trub1Q8C0D0 Kcnj15-207ENSMUST00000113861 3385 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Trub1Q8C0D0 Gm43970-201ENSMUST00000204346 3605 ntBASIC7.76□□□□□ -1.17
Trub1Q8C0D0 Cep57l1-209ENSMUST00000189770 2232 ntAPPRIS P3 TSL 1 (best) BASIC7.76□□□□□ -1.17
Trub1Q8C0D0 Cd44-205ENSMUST00000111191 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC7.76□□□□□ -1.17
Trub1Q8C0D0 Ndufb8-209ENSMUST00000171415 2142 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Trub1Q8C0D0 Olfr859-203ENSMUST00000217280 9596 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
Trub1Q8C0D0 AC140409.2-201ENSMUST00000216936 3079 ntTSL 5 BASIC7.76□□□□□ -1.17
Trub1Q8C0D0 Parp8-201ENSMUST00000022239 3098 ntTSL 5 BASIC7.76□□□□□ -1.17
Trub1Q8C0D0 Morc1-201ENSMUST00000023330 3050 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Trub1Q8C0D0 Olfr701-201ENSMUST00000075414 3063 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Trub1Q8C0D0 AI662270-202ENSMUST00000143673 1428 ntTSL 5 BASIC7.76□□□□□ -1.17
Trub1Q8C0D0 4921504E06Rik-201ENSMUST00000062060 2008 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Trub1Q8C0D0 Kif20a-201ENSMUST00000166044 3567 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Trub1Q8C0D0 Kif20a-202ENSMUST00000167161 3565 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Trub1Q8C0D0 Nin-202ENSMUST00000085314 9675 ntAPPRIS P4 TSL 1 (best) BASIC7.76□□□□□ -1.17
Trub1Q8C0D0 Msn-201ENSMUST00000117399 3842 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Trub1Q8C0D0 Amot-201ENSMUST00000112835 6519 ntAPPRIS ALT2 TSL 5 BASIC7.76□□□□□ -1.17
Trub1Q8C0D0 Olfr374-202ENSMUST00000210435 8718 ntAPPRIS P1 TSL 2 BASIC7.76□□□□□ -1.17
Trub1Q8C0D0 C8a-203ENSMUST00000106808 3539 ntTSL 2 BASIC7.75□□□□□ -1.17
Trub1Q8C0D0 Zbtb6-201ENSMUST00000053098 4535 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Trub1Q8C0D0 Mast4-201ENSMUST00000099202 7709 ntAPPRIS ALT2 TSL 5 BASIC7.75□□□□□ -1.17
Trub1Q8C0D0 Rere-201ENSMUST00000105680 6503 ntAPPRIS ALT2 TSL 5 BASIC7.75□□□□□ -1.17
Trub1Q8C0D0 Olfr224-203ENSMUST00000216758 1742 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
Trub1Q8C0D0 Gykl1-201ENSMUST00000066193 1990 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
Trub1Q8C0D0 Gm42969-201ENSMUST00000199858 3631 ntBASIC7.75□□□□□ -1.17
Trub1Q8C0D0 1110008L16Rik-201ENSMUST00000021411 3122 ntAPPRIS P2 TSL 1 (best) BASIC7.75□□□□□ -1.17
Trub1Q8C0D0 Cdh9-201ENSMUST00000026432 2892 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
Trub1Q8C0D0 C8a-202ENSMUST00000064873 3617 ntAPPRIS P3 TSL 1 (best) BASIC7.75□□□□□ -1.17
Trub1Q8C0D0 Olfr802-202ENSMUST00000203785 5535 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
Trub1Q8C0D0 Gm26720-201ENSMUST00000181260 3538 ntTSL 5 BASIC7.75□□□□□ -1.17
Trub1Q8C0D0 Gm44014-201ENSMUST00000205150 1509 ntBASIC7.75□□□□□ -1.17
Trub1Q8C0D0 Zfp143-204ENSMUST00000209505 2693 ntAPPRIS P2 TSL 1 (best) BASIC7.75□□□□□ -1.17
Trub1Q8C0D0 Rapgef5-205ENSMUST00000222105 2677 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Trub1Q8C0D0 Mir763-201ENSMUST00000103249 120 ntBASIC7.75□□□□□ -1.17
Trub1Q8C0D0 Gm22661-201ENSMUST00000104192 132 ntBASIC7.75□□□□□ -1.17
Trub1Q8C0D0 Defa33-201ENSMUST00000120874 426 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Trub1Q8C0D0 Gm12632-201ENSMUST00000121223 495 ntBASIC7.75□□□□□ -1.17
Trub1Q8C0D0 Gm15928-201ENSMUST00000122455 280 ntBASIC7.75□□□□□ -1.17
Trub1Q8C0D0 Defa2-201ENSMUST00000170275 426 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Trub1Q8C0D0 Gm6176-201ENSMUST00000178209 906 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
Trub1Q8C0D0 Gm4567-201ENSMUST00000178591 906 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
Trub1Q8C0D0 Gm10668-201ENSMUST00000179491 906 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
Trub1Q8C0D0 Gm5445-201ENSMUST00000180224 480 ntBASIC7.75□□□□□ -1.17
Trub1Q8C0D0 Gm27542-201ENSMUST00000184184 256 ntBASIC7.75□□□□□ -1.17
Trub1Q8C0D0 Gm4545-201ENSMUST00000190797 603 ntBASIC7.75□□□□□ -1.17
Trub1Q8C0D0 Rnf212-202ENSMUST00000196652 853 ntTSL 2 BASIC7.75□□□□□ -1.17
Trub1Q8C0D0 Kcne3-205ENSMUST00000207358 1154 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
Trub1Q8C0D0 Gm7151-201ENSMUST00000211511 954 ntBASIC7.75□□□□□ -1.17
Trub1Q8C0D0 1700047G07Rik-202ENSMUST00000212351 842 ntTSL 5 BASIC7.75□□□□□ -1.17
Trub1Q8C0D0 Gm30853-201ENSMUST00000218367 810 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Trub1Q8C0D0 AC160112.1-201ENSMUST00000219139 714 ntBASIC7.75□□□□□ -1.17
Trub1Q8C0D0 Gm5514-201ENSMUST00000060477 306 ntBASIC7.75□□□□□ -1.17
Trub1Q8C0D0 Reg1-201ENSMUST00000079926 769 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Trub1Q8C0D0 Olfr1338-201ENSMUST00000084315 942 ntAPPRIS P2 BASIC7.75□□□□□ -1.17
Trub1Q8C0D0 Ube2c-202ENSMUST00000088248 967 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Trub1Q8C0D0 Vmn1r196-201ENSMUST00000091735 906 ntAPPRIS P2 BASIC7.75□□□□□ -1.17
Trub1Q8C0D0 Gm28333-201ENSMUST00000186034 2168 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Trub1Q8C0D0 Gm28718-201ENSMUST00000188417 2168 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Trub1Q8C0D0 Gm28977-201ENSMUST00000188678 2168 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Trub1Q8C0D0 Gm28315-201ENSMUST00000189948 2168 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms