Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Gm8171-201ENSMUST00000217443 720 ntBASIC8.34□□□□□ -1.07
Tpm1P58771 AC124712.1-201ENSMUST00000221833 445 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
Tpm1P58771 AC129975.2-201ENSMUST00000223705 775 ntBASIC8.34□□□□□ -1.07
Tpm1P58771 AC160109.1-201ENSMUST00000225592 729 ntBASIC8.34□□□□□ -1.07
Tpm1P58771 AC126028.1-201ENSMUST00000226218 2123 ntBASIC8.34□□□□□ -1.07
Tpm1P58771 AC164978.2-201ENSMUST00000226645 857 ntBASIC8.34□□□□□ -1.07
Tpm1P58771 AC107452.2-201ENSMUST00000228415 363 ntBASIC8.34□□□□□ -1.07
Tpm1P58771 Capsl-201ENSMUST00000042360 949 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Tpm1P58771 Olfr1320-201ENSMUST00000096449 960 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
Tpm1P58771 Vmn1r181-208ENSMUST00000228842 4491 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
Tpm1P58771 Gm3139-201ENSMUST00000178330 1446 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
Tpm1P58771 Gm3183-201ENSMUST00000180076 1446 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.07
Tpm1P58771 Gm43533-201ENSMUST00000202933 2936 ntBASIC8.34□□□□□ -1.07
Tpm1P58771 Olfr90-203ENSMUST00000215195 3060 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
Tpm1P58771 Gm43158-201ENSMUST00000198484 1555 ntBASIC8.34□□□□□ -1.07
Tpm1P58771 Foxp1-206ENSMUST00000113326 7029 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Tpm1P58771 Gm45876-201ENSMUST00000212698 2709 ntBASIC8.34□□□□□ -1.07
Tpm1P58771 Tgfbr1-203ENSMUST00000107725 1713 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Tpm1P58771 AC144772.2-201ENSMUST00000228830 2859 ntBASIC8.34□□□□□ -1.07
Tpm1P58771 Gm1976-202ENSMUST00000182639 1853 ntTSL 2 BASIC8.34□□□□□ -1.07
Tpm1P58771 Shprh-202ENSMUST00000054814 7225 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
Tpm1P58771 Chil3-201ENSMUST00000063062 1539 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.08
Tpm1P58771 Chil4-201ENSMUST00000082219 1539 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.08
Tpm1P58771 Gm42973-201ENSMUST00000197913 3200 ntBASIC8.33□□□□□ -1.08
Tpm1P58771 Cltc-201ENSMUST00000060766 6163 ntTSL 5 BASIC8.33□□□□□ -1.08
Tpm1P58771 Mpdz-202ENSMUST00000107258 7241 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Tpm1P58771 Lmbrd2-204ENSMUST00000227556 8099 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
Tpm1P58771 F2rl2-201ENSMUST00000022182 2502 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Tpm1P58771 Gm37984-201ENSMUST00000191641 3733 ntBASIC8.33□□□□□ -1.08
Tpm1P58771 Zfp655-205ENSMUST00000199322 4157 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Tpm1P58771 Olfr329-ps-202ENSMUST00000108823 1060 ntAPPRIS P2 BASIC8.33□□□□□ -1.08
Tpm1P58771 Gm8688-201ENSMUST00000118240 969 ntBASIC8.33□□□□□ -1.08
Tpm1P58771 Gm11220-201ENSMUST00000118844 475 ntBASIC8.33□□□□□ -1.08
Tpm1P58771 Gm13313-201ENSMUST00000118938 1084 ntBASIC8.33□□□□□ -1.08
Tpm1P58771 H3f3a-ps1-201ENSMUST00000119546 410 ntBASIC8.33□□□□□ -1.08
Tpm1P58771 Gm14225-201ENSMUST00000142310 539 ntTSL 2 BASIC8.33□□□□□ -1.08
Tpm1P58771 Gm12861-201ENSMUST00000145395 681 ntTSL 3 BASIC8.33□□□□□ -1.08
Tpm1P58771 Gm25442-201ENSMUST00000177270 92 ntBASIC8.33□□□□□ -1.08
Tpm1P58771 I830127L07Rik-201ENSMUST00000187250 730 ntTSL 5 BASIC8.33□□□□□ -1.08
Tpm1P58771 Gm17867-201ENSMUST00000188981 391 ntBASIC8.33□□□□□ -1.08
Tpm1P58771 1700027F09Rik-201ENSMUST00000189767 767 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Tpm1P58771 Scgb1b9-ps-201ENSMUST00000191567 266 ntBASIC8.33□□□□□ -1.08
Tpm1P58771 Gm43647-201ENSMUST00000198142 486 ntTSL 5 BASIC8.33□□□□□ -1.08
Tpm1P58771 4933439J24Rik-201ENSMUST00000200866 853 ntBASIC8.33□□□□□ -1.08
Tpm1P58771 Rarres2-204ENSMUST00000204267 795 ntAPPRIS P3 TSL 1 (best) BASIC8.33□□□□□ -1.08
Tpm1P58771 Rarres2-205ENSMUST00000204930 681 ntAPPRIS P3 TSL 2 BASIC8.33□□□□□ -1.08
Tpm1P58771 Gm44588-201ENSMUST00000208401 545 ntTSL 5 BASIC8.33□□□□□ -1.08
Tpm1P58771 Pvrig-201ENSMUST00000211088 1080 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
Tpm1P58771 Zfp143-205ENSMUST00000211798 2631 ntAPPRIS P2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Tpm1P58771 Gm17875-201ENSMUST00000216005 941 ntBASIC8.33□□□□□ -1.08
Tpm1P58771 Olfr313-202ENSMUST00000217506 2612 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
Tpm1P58771 Gm6989-201ENSMUST00000218409 654 ntBASIC8.33□□□□□ -1.08
Tpm1P58771 A930040O22Rik-201ENSMUST00000221662 973 ntBASIC8.33□□□□□ -1.08
Tpm1P58771 Zfp389-202ENSMUST00000224437 1234 ntBASIC8.33□□□□□ -1.08
Tpm1P58771 Plac8-201ENSMUST00000031264 744 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Tpm1P58771 Gm4871-201ENSMUST00000071421 1119 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Tpm1P58771 Elobl-202ENSMUST00000082339 300 ntBASIC8.33□□□□□ -1.08
Tpm1P58771 Gm38120-201ENSMUST00000195506 4642 ntBASIC8.33□□□□□ -1.08
Tpm1P58771 Nup93-202ENSMUST00000109547 2847 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
Tpm1P58771 AC166159.1-201ENSMUST00000227154 1380 ntBASIC8.33□□□□□ -1.08
Tpm1P58771 Cast-210ENSMUST00000223126 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Tpm1P58771 Gm9573-201ENSMUST00000164502 5231 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
Tpm1P58771 Apobec3-202ENSMUST00000109620 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Tpm1P58771 Zfp263-207ENSMUST00000162207 2452 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Tpm1P58771 Cmah-208ENSMUST00000224819 9482 ntBASIC8.32□□□□□ -1.08
Tpm1P58771 Polr2b-201ENSMUST00000031167 4145 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Tpm1P58771 Crnkl1-201ENSMUST00000001818 3428 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Tpm1P58771 AC110091.3-201ENSMUST00000213406 1304 ntTSL 5 BASIC8.32□□□□□ -1.08
Tpm1P58771 Zfp799-205ENSMUST00000202988 6012 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Tpm1P58771 Eya4-202ENSMUST00000092665 5304 ntAPPRIS P2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Tpm1P58771 Nrg1-203ENSMUST00000207470 5415 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Tpm1P58771 BC147527-202ENSMUST00000225029 1595 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
Tpm1P58771 Armc2-203ENSMUST00000160262 4810 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
Tpm1P58771 Gm43022-201ENSMUST00000197067 4268 ntBASIC8.32□□□□□ -1.08
Tpm1P58771 Slc25a5-ps-203ENSMUST00000223928 1442 ntBASIC8.32□□□□□ -1.08
Tpm1P58771 Prkacb-204ENSMUST00000106138 3999 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Tpm1P58771 Gm24335-201ENSMUST00000104211 132 ntBASIC8.32□□□□□ -1.08
Tpm1P58771 Rnf170-203ENSMUST00000110575 966 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Tpm1P58771 Gm23840-201ENSMUST00000116950 97 ntBASIC8.32□□□□□ -1.08
Tpm1P58771 Gm15047-201ENSMUST00000118891 454 ntBASIC8.32□□□□□ -1.08
Tpm1P58771 Gm13776-201ENSMUST00000122236 1261 ntBASIC8.32□□□□□ -1.08
Tpm1P58771 Gm16174-201ENSMUST00000137373 402 ntTSL 2 BASIC8.32□□□□□ -1.08
Tpm1P58771 Gm13799-201ENSMUST00000138883 838 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Tpm1P58771 Gm13175-201ENSMUST00000139479 466 ntTSL 3 BASIC8.32□□□□□ -1.08
Tpm1P58771 Gm25190-201ENSMUST00000176664 95 ntBASIC8.32□□□□□ -1.08
Tpm1P58771 Peak1os-201ENSMUST00000181444 1264 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Tpm1P58771 2310009A05Rik-201ENSMUST00000184126 496 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Tpm1P58771 BC025446-202ENSMUST00000185307 758 ntAPPRIS P5 TSL 2 BASIC8.32□□□□□ -1.08
Tpm1P58771 C430002N11Rik-204ENSMUST00000190054 443 ntTSL 3 BASIC8.32□□□□□ -1.08
Tpm1P58771 Gm42861-201ENSMUST00000199596 634 ntBASIC8.32□□□□□ -1.08
Tpm1P58771 AC192091.1-201ENSMUST00000218668 439 ntBASIC8.32□□□□□ -1.08
Tpm1P58771 AC154738.3-201ENSMUST00000227953 409 ntBASIC8.32□□□□□ -1.08
Tpm1P58771 Sec24a-201ENSMUST00000038210 3800 ntAPPRIS ALT2 TSL 2 BASIC8.32□□□□□ -1.08
Tpm1P58771 Olfr13-201ENSMUST00000059512 1054 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
Tpm1P58771 Gm8623-201ENSMUST00000071573 436 ntBASIC8.32□□□□□ -1.08
Tpm1P58771 Gm10029-201ENSMUST00000089635 330 ntBASIC8.32□□□□□ -1.08
Tpm1P58771 Gm29811-201ENSMUST00000197386 1671 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Tpm1P58771 Oscp1-201ENSMUST00000035497 5013 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Tpm1P58771 Aldh1l2-206ENSMUST00000146640 3938 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Tpm1P58771 Gm15681-201ENSMUST00000137501 2704 ntBASIC8.32□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 99.1 ms