Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Trim2-201ENSMUST00000054990 3816 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Col18a1P39061 Olfr532-201ENSMUST00000073226 930 ntAPPRIS P1 BASIC9.9□□□□□ -0.82
Col18a1P39061 D830044D21Rik-201ENSMUST00000143315 3897 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Col18a1P39061 Arid1a-201ENSMUST00000008024 6486 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Col18a1P39061 Pgbd1-205ENSMUST00000151743 2642 ntAPPRIS P4 TSL 1 (best) BASIC9.9□□□□□ -0.82
Col18a1P39061 Tgm4-201ENSMUST00000026893 2785 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Col18a1P39061 Pkn2-210ENSMUST00000174422 2904 ntTSL 5 BASIC9.9□□□□□ -0.83
Col18a1P39061 Gucy1b3-204ENSMUST00000193597 3171 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
Col18a1P39061 Lrrc6-201ENSMUST00000023006 2084 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Col18a1P39061 Cacnb2-214ENSMUST00000193800 2117 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.83
Col18a1P39061 Gja10-201ENSMUST00000056517 2117 ntAPPRIS P2 BASIC9.9□□□□□ -0.83
Col18a1P39061 Xpo7-201ENSMUST00000022696 4472 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.83
Col18a1P39061 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Col18a1P39061 Vmn2r4-202ENSMUST00000175724 2742 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Col18a1P39061 Vmn2r6-202ENSMUST00000176481 2742 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Col18a1P39061 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Col18a1P39061 Col6a3-202ENSMUST00000097653 9001 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Col18a1P39061 Gm23311-201ENSMUST00000104152 134 ntBASIC9.89□□□□□ -0.83
Col18a1P39061 Dab1-201ENSMUST00000106826 996 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Col18a1P39061 Trim21-202ENSMUST00000106913 2682 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Col18a1P39061 Ccdc7a-202ENSMUST00000108747 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Col18a1P39061 Fmo4-202ENSMUST00000111525 2683 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Col18a1P39061 Klhl13-203ENSMUST00000115316 3064 ntTSL 5 BASIC9.89□□□□□ -0.83
Col18a1P39061 Gm14729-201ENSMUST00000118373 689 ntBASIC9.89□□□□□ -0.83
Col18a1P39061 Spata3-203ENSMUST00000125083 704 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Col18a1P39061 1700123O12Rik-202ENSMUST00000141312 660 ntTSL 3 BASIC9.89□□□□□ -0.83
Col18a1P39061 Gm15063-201ENSMUST00000152648 895 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Col18a1P39061 Gm27255-201ENSMUST00000184303 529 ntTSL 3 BASIC9.89□□□□□ -0.83
Col18a1P39061 1700066C05Rik-201ENSMUST00000191029 407 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Col18a1P39061 Gm44116-201ENSMUST00000204269 1525 ntBASIC9.89□□□□□ -0.83
Col18a1P39061 Gm29895-201ENSMUST00000209933 5652 ntTSL 5 BASIC9.89□□□□□ -0.83
Col18a1P39061 Gm5831-201ENSMUST00000216016 1209 ntBASIC9.89□□□□□ -0.83
Col18a1P39061 AC105324.1-201ENSMUST00000227844 386 ntBASIC9.89□□□□□ -0.83
Col18a1P39061 AC154627.1-201ENSMUST00000228799 1286 ntBASIC9.89□□□□□ -0.83
Col18a1P39061 Pard3-201ENSMUST00000026921 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Col18a1P39061 Olfr221-201ENSMUST00000052560 2741 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Col18a1P39061 Csf2rb-201ENSMUST00000096355 4764 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Col18a1P39061 Emsy-201ENSMUST00000038359 3564 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Col18a1P39061 Dsg4-201ENSMUST00000019426 3478 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Col18a1P39061 AU020206-202ENSMUST00000206358 3009 ntBASIC9.89□□□□□ -0.83
Col18a1P39061 Ccser1-201ENSMUST00000045522 2688 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Col18a1P39061 Adam18-201ENSMUST00000033957 2361 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Col18a1P39061 Gm5903-201ENSMUST00000121836 2325 ntBASIC9.89□□□□□ -0.83
Col18a1P39061 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC9.89□□□□□ -0.83
Col18a1P39061 Gm20089-201ENSMUST00000192391 2084 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Col18a1P39061 Pla2g4d-201ENSMUST00000094665 3688 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Col18a1P39061 Il15ra-210ENSMUST00000128156 1624 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Col18a1P39061 Gm5157-201ENSMUST00000185914 1581 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Col18a1P39061 Rfpl4-201ENSMUST00000045215 1598 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Col18a1P39061 Adgrf4-201ENSMUST00000024711 3060 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Col18a1P39061 Pdgfra-208ENSMUST00000202681 2876 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Col18a1P39061 Gm9575-201ENSMUST00000122140 1339 ntBASIC9.88□□□□□ -0.83
Col18a1P39061 Gm24272-201ENSMUST00000102329 98 ntBASIC9.88□□□□□ -0.83
Col18a1P39061 Dhx30-202ENSMUST00000111991 3829 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
Col18a1P39061 Gm14054-201ENSMUST00000120744 704 ntBASIC9.88□□□□□ -0.83
Col18a1P39061 Gm13578-201ENSMUST00000120849 590 ntBASIC9.88□□□□□ -0.83
Col18a1P39061 Gad1os-201ENSMUST00000151851 889 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Col18a1P39061 Gm25969-201ENSMUST00000157166 132 ntBASIC9.88□□□□□ -0.83
Col18a1P39061 Gm8837-201ENSMUST00000161037 1107 ntBASIC9.88□□□□□ -0.83
Col18a1P39061 Gm27030-201ENSMUST00000182551 464 ntBASIC9.88□□□□□ -0.83
Col18a1P39061 Gm27653-201ENSMUST00000185037 136 ntBASIC9.88□□□□□ -0.83
Col18a1P39061 Gm38226-201ENSMUST00000192207 521 ntBASIC9.88□□□□□ -0.83
Col18a1P39061 Gm38216-201ENSMUST00000194872 1214 ntBASIC9.88□□□□□ -0.83
Col18a1P39061 4933417G07Rik-202ENSMUST00000199732 964 ntBASIC9.88□□□□□ -0.83
Col18a1P39061 Gm4083-201ENSMUST00000207158 451 ntBASIC9.88□□□□□ -0.83
Col18a1P39061 Gm44787-202ENSMUST00000208339 1069 ntTSL 5 BASIC9.88□□□□□ -0.83
Col18a1P39061 Gm31812-201ENSMUST00000210323 1170 ntTSL 3 BASIC9.88□□□□□ -0.83
Col18a1P39061 Olfr1240-201ENSMUST00000215362 1074 ntAPPRIS P1 BASIC9.88□□□□□ -0.83
Col18a1P39061 Gm8607-201ENSMUST00000221864 431 ntBASIC9.88□□□□□ -0.83
Col18a1P39061 AC102542.1-201ENSMUST00000225204 1138 ntBASIC9.88□□□□□ -0.83
Col18a1P39061 Olfr610-201ENSMUST00000063109 948 ntAPPRIS P1 BASIC9.88□□□□□ -0.83
Col18a1P39061 Cd22-202ENSMUST00000108125 3633 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Col18a1P39061 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Col18a1P39061 Runx1t1-203ENSMUST00000098257 2332 ntAPPRIS ALT1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Col18a1P39061 St7-203ENSMUST00000053148 2288 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Col18a1P39061 Btn2a2-201ENSMUST00000041541 2226 ntTSL 2 BASIC9.88□□□□□ -0.83
Col18a1P39061 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
Col18a1P39061 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC9.88□□□□□ -0.83
Col18a1P39061 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Col18a1P39061 Myh13-201ENSMUST00000081911 5817 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
Col18a1P39061 Gm37960-201ENSMUST00000192402 1897 ntBASIC9.88□□□□□ -0.83
Col18a1P39061 Tmc2-202ENSMUST00000166774 2667 ntAPPRIS P1 TSL 2 BASIC9.88□□□□□ -0.83
Col18a1P39061 Psg18-202ENSMUST00000098783 1783 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Col18a1P39061 Prom1-202ENSMUST00000074113 3966 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Col18a1P39061 Msh4-205ENSMUST00000190449 3110 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Col18a1P39061 Daam1-201ENSMUST00000085299 5879 ntAPPRIS P2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Col18a1P39061 Gm37289-201ENSMUST00000195409 1402 ntBASIC9.88□□□□□ -0.83
Col18a1P39061 Daw1-203ENSMUST00000113436 1351 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Col18a1P39061 Nrf1-206ENSMUST00000115204 2047 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Col18a1P39061 St8sia4-201ENSMUST00000043336 5390 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Col18a1P39061 Ank3-206ENSMUST00000092434 5886 ntAPPRIS P4 TSL 5 BASIC9.88□□□□□ -0.83
Col18a1P39061 Olfr634-ps1-201ENSMUST00000119267 955 ntAPPRIS P1 BASIC9.88□□□□□ -0.83
Col18a1P39061 Gm8241-201ENSMUST00000189286 816 ntBASIC9.88□□□□□ -0.83
Col18a1P39061 Gm44342-201ENSMUST00000196874 129 ntBASIC9.88□□□□□ -0.83
Col18a1P39061 Gm42919-201ENSMUST00000197753 1284 ntBASIC9.88□□□□□ -0.83
Col18a1P39061 Gm44383-201ENSMUST00000198940 129 ntBASIC9.88□□□□□ -0.83
Col18a1P39061 Traf1-209ENSMUST00000201690 386 ntTSL 3 BASIC9.88□□□□□ -0.83
Col18a1P39061 Gm44422-201ENSMUST00000204142 1025 ntBASIC9.88□□□□□ -0.83
Col18a1P39061 Gm18012-201ENSMUST00000204558 773 ntBASIC9.88□□□□□ -0.83
Col18a1P39061 Gm45071-201ENSMUST00000205353 571 ntBASIC9.88□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms