Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Tas1r3-201ENSMUST00000030949 3523 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Col6a3E9PWQ3 4930579H20Rik-201ENSMUST00000187815 1516 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Col6a3E9PWQ3 Glrx-201ENSMUST00000022082 1345 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Col6a3E9PWQ3 B130021K23Rik-201ENSMUST00000205226 2593 ntBASIC7.27□□□□□ -1.25
Col6a3E9PWQ3 Slc16a14-201ENSMUST00000027422 3207 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Col6a3E9PWQ3 P2ry14-202ENSMUST00000091112 1795 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Col6a3E9PWQ3 Plekha7-207ENSMUST00000182511 4502 ntTSL 2 BASIC7.27□□□□□ -1.25
Col6a3E9PWQ3 Acvr1-202ENSMUST00000090935 3293 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Col6a3E9PWQ3 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Col6a3E9PWQ3 Gm24855-201ENSMUST00000104848 97 ntBASIC7.27□□□□□ -1.25
Col6a3E9PWQ3 Spin2-ps2-201ENSMUST00000116186 778 ntBASIC7.27□□□□□ -1.25
Col6a3E9PWQ3 8430436N08Rik-201ENSMUST00000129988 1077 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Col6a3E9PWQ3 Gm23011-202ENSMUST00000197855 275 ntBASIC7.27□□□□□ -1.25
Col6a3E9PWQ3 AC151904.3-201ENSMUST00000219266 895 ntBASIC7.27□□□□□ -1.25
Col6a3E9PWQ3 Gm19189-201ENSMUST00000221689 754 ntBASIC7.27□□□□□ -1.25
Col6a3E9PWQ3 AC161586.1-201ENSMUST00000223232 547 ntBASIC7.27□□□□□ -1.25
Col6a3E9PWQ3 Psmb11-201ENSMUST00000097177 4247 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
Col6a3E9PWQ3 Gm29507-201ENSMUST00000187378 2088 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Col6a3E9PWQ3 Gm37138-201ENSMUST00000194564 2089 ntBASIC7.27□□□□□ -1.25
Col6a3E9PWQ3 Cacnb2-214ENSMUST00000193800 2117 ntAPPRIS P3 TSL 1 (best) BASIC7.27□□□□□ -1.25
Col6a3E9PWQ3 Mcm9-203ENSMUST00000219547 3168 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Col6a3E9PWQ3 Gm36908-201ENSMUST00000218080 1662 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Col6a3E9PWQ3 Cspp1-201ENSMUST00000071087 4355 ntAPPRIS P2 TSL 1 (best) BASIC7.27□□□□□ -1.25
Col6a3E9PWQ3 Gm16427-202ENSMUST00000200745 1749 ntAPPRIS P5 TSL 2 BASIC7.27□□□□□ -1.25
Col6a3E9PWQ3 Cd300lb-203ENSMUST00000149663 2641 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Col6a3E9PWQ3 Mtmr4-202ENSMUST00000103179 5753 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Col6a3E9PWQ3 Gm13229-201ENSMUST00000118238 340 ntBASIC7.26□□□□□ -1.25
Col6a3E9PWQ3 Gm13007-201ENSMUST00000121866 365 ntBASIC7.26□□□□□ -1.25
Col6a3E9PWQ3 4930415H17Rik-201ENSMUST00000122396 123 ntBASIC7.26□□□□□ -1.25
Col6a3E9PWQ3 Tbata-207ENSMUST00000140456 953 ntTSL 5 BASIC7.26□□□□□ -1.25
Col6a3E9PWQ3 Tbata-208ENSMUST00000143207 982 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Col6a3E9PWQ3 Gm11292-201ENSMUST00000146121 1153 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Col6a3E9PWQ3 Gm20647-201ENSMUST00000176396 857 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Col6a3E9PWQ3 Gm27207-201ENSMUST00000184995 878 ntTSL 3 BASIC7.26□□□□□ -1.25
Col6a3E9PWQ3 Gm17995-201ENSMUST00000209266 530 ntBASIC7.26□□□□□ -1.25
Col6a3E9PWQ3 AC121788.1-201ENSMUST00000218514 1046 ntTSL 5 BASIC7.26□□□□□ -1.25
Col6a3E9PWQ3 Sepsecs-201ENSMUST00000031069 5252 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Col6a3E9PWQ3 Rpgr-206ENSMUST00000115534 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC7.26□□□□□ -1.25
Col6a3E9PWQ3 Otoa-201ENSMUST00000047025 3773 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Col6a3E9PWQ3 Phc3-204ENSMUST00000108255 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC7.26□□□□□ -1.25
Col6a3E9PWQ3 Plau-201ENSMUST00000022368 2342 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Col6a3E9PWQ3 Gm42515-201ENSMUST00000199936 3583 ntBASIC7.26□□□□□ -1.25
Col6a3E9PWQ3 Gpr37-201ENSMUST00000054867 4974 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Col6a3E9PWQ3 Zbtb14-202ENSMUST00000112674 3743 ntAPPRIS P1 TSL 3 BASIC7.26□□□□□ -1.25
Col6a3E9PWQ3 Tcam1-201ENSMUST00000044462 3511 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Col6a3E9PWQ3 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC7.26□□□□□ -1.25
Col6a3E9PWQ3 Gm44745-201ENSMUST00000206563 2723 ntBASIC7.26□□□□□ -1.25
Col6a3E9PWQ3 Gm12844-201ENSMUST00000119463 582 ntBASIC7.26□□□□□ -1.25
Col6a3E9PWQ3 Gm13029-201ENSMUST00000137283 594 ntTSL 3 BASIC7.26□□□□□ -1.25
Col6a3E9PWQ3 Gm17472-201ENSMUST00000167638 352 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
Col6a3E9PWQ3 Gm28416-201ENSMUST00000188334 292 ntBASIC7.26□□□□□ -1.25
Col6a3E9PWQ3 Gm6077-201ENSMUST00000196008 499 ntBASIC7.26□□□□□ -1.25
Col6a3E9PWQ3 Gm32983-201ENSMUST00000208500 505 ntBASIC7.26□□□□□ -1.25
Col6a3E9PWQ3 Olfr221-203ENSMUST00000214342 1062 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
Col6a3E9PWQ3 n-R5s97-201ENSMUST00000082585 113 ntBASIC7.26□□□□□ -1.25
Col6a3E9PWQ3 Adam18-201ENSMUST00000033957 2361 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Col6a3E9PWQ3 Spata31d1b-201ENSMUST00000165133 4287 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Col6a3E9PWQ3 Hnrnph2-204ENSMUST00000113202 3988 ntAPPRIS P1 TSL 2 BASIC7.26□□□□□ -1.25
Col6a3E9PWQ3 Mtpn-201ENSMUST00000031866 3960 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Col6a3E9PWQ3 Zfa-ps-202ENSMUST00000180673 3420 ntBASIC7.26□□□□□ -1.25
Col6a3E9PWQ3 Gas2l3-201ENSMUST00000099374 6748 ntAPPRIS P2 TSL 1 (best) BASIC7.26□□□□□ -1.25
Col6a3E9PWQ3 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Col6a3E9PWQ3 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Col6a3E9PWQ3 Gm10302-201ENSMUST00000174433 3535 ntBASIC7.26□□□□□ -1.25
Col6a3E9PWQ3 Slu7-201ENSMUST00000020681 3625 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Col6a3E9PWQ3 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC7.26□□□□□ -1.25
Col6a3E9PWQ3 Arhgap17-211ENSMUST00000207010 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC7.26□□□□□ -1.25
Col6a3E9PWQ3 Gm5228-201ENSMUST00000117186 357 ntBASIC7.26□□□□□ -1.25
Col6a3E9PWQ3 Gm15073-201ENSMUST00000117432 634 ntBASIC7.26□□□□□ -1.25
Col6a3E9PWQ3 Rps12-ps5-201ENSMUST00000118272 389 ntBASIC7.26□□□□□ -1.25
Col6a3E9PWQ3 Snrpe-204ENSMUST00000166915 503 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Col6a3E9PWQ3 Olr1-203ENSMUST00000182784 570 ntAPPRIS ALT2 TSL 1 (best) BASIC7.26□□□□□ -1.25
Col6a3E9PWQ3 Igkv4-56-201ENSMUST00000198436 349 ntBASIC7.26□□□□□ -1.25
Col6a3E9PWQ3 Gm43798-201ENSMUST00000202056 394 ntBASIC7.26□□□□□ -1.25
Col6a3E9PWQ3 Gm43867-201ENSMUST00000203860 525 ntBASIC7.26□□□□□ -1.25
Col6a3E9PWQ3 AC154380.1-201ENSMUST00000226804 720 ntBASIC7.26□□□□□ -1.25
Col6a3E9PWQ3 Olfr572-201ENSMUST00000098214 957 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
Col6a3E9PWQ3 Gm21969-201ENSMUST00000178644 4402 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
Col6a3E9PWQ3 Oas1e-203ENSMUST00000201172 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC7.26□□□□□ -1.25
Col6a3E9PWQ3 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC7.26□□□□□ -1.25
Col6a3E9PWQ3 Cacng5-202ENSMUST00000106742 3678 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Col6a3E9PWQ3 Akap1-202ENSMUST00000107903 3721 ntAPPRIS P2 TSL 1 (best) BASIC7.26□□□□□ -1.25
Col6a3E9PWQ3 Gm28311-201ENSMUST00000185236 1497 ntTSL 5 BASIC7.26□□□□□ -1.25
Col6a3E9PWQ3 Gm28549-202ENSMUST00000191354 1497 ntTSL 5 BASIC7.26□□□□□ -1.25
Col6a3E9PWQ3 Hmgb1-201ENSMUST00000085546 2838 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Col6a3E9PWQ3 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC7.25□□□□□ -1.25
Col6a3E9PWQ3 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.25
Col6a3E9PWQ3 Cntn5-205ENSMUST00000179049 2682 ntTSL 5 BASIC7.25□□□□□ -1.25
Col6a3E9PWQ3 Bmpr1a-202ENSMUST00000165280 1945 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Col6a3E9PWQ3 Selenof-202ENSMUST00000106211 1178 ntTSL 3 BASIC7.25□□□□□ -1.25
Col6a3E9PWQ3 Gm12949-201ENSMUST00000143382 362 ntTSL 3 BASIC7.25□□□□□ -1.25
Col6a3E9PWQ3 Cnih1-202ENSMUST00000146629 789 ntTSL 5 BASIC7.25□□□□□ -1.25
Col6a3E9PWQ3 Mir3110-201ENSMUST00000175053 80 ntBASIC7.25□□□□□ -1.25
Col6a3E9PWQ3 Gm20617-202ENSMUST00000177332 758 ntTSL 3 BASIC7.25□□□□□ -1.25
Col6a3E9PWQ3 Gm35801-201ENSMUST00000193927 479 ntTSL 3 BASIC7.25□□□□□ -1.25
Col6a3E9PWQ3 Gm43054-201ENSMUST00000199495 884 ntBASIC7.25□□□□□ -1.25
Col6a3E9PWQ3 Gm45686-202ENSMUST00000211580 1138 ntTSL 5 BASIC7.25□□□□□ -1.25
Col6a3E9PWQ3 AC165292.1-201ENSMUST00000215218 620 ntBASIC7.25□□□□□ -1.25
Col6a3E9PWQ3 Olfr211-201ENSMUST00000065786 930 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
Col6a3E9PWQ3 Nlgn1-203ENSMUST00000191835 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.25
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms