Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 Gm37915-201ENSMUST00000195134 3261 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Ccdc87Q8CDL9 Retreg1-205ENSMUST00000227275 3200 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
Ccdc87Q8CDL9 Gm23131-201ENSMUST00000104253 132 ntBASIC8.14□□□□□ -1.11
Ccdc87Q8CDL9 Gm12310-201ENSMUST00000118013 492 ntBASIC8.14□□□□□ -1.11
Ccdc87Q8CDL9 Gm12692-201ENSMUST00000121092 546 ntBASIC8.14□□□□□ -1.11
Ccdc87Q8CDL9 Gm11933-201ENSMUST00000121550 375 ntBASIC8.14□□□□□ -1.11
Ccdc87Q8CDL9 Olfr636-ps1-201ENSMUST00000134827 935 ntBASIC8.14□□□□□ -1.11
Ccdc87Q8CDL9 Gtsf1-206ENSMUST00000146675 756 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
Ccdc87Q8CDL9 Gm15418-201ENSMUST00000151014 677 ntTSL 5 BASIC8.14□□□□□ -1.11
Ccdc87Q8CDL9 1500004A13Rik-201ENSMUST00000183374 891 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Ccdc87Q8CDL9 Mir6415-201ENSMUST00000184064 100 ntBASIC8.14□□□□□ -1.11
Ccdc87Q8CDL9 Gm23604-202ENSMUST00000198428 137 ntBASIC8.14□□□□□ -1.11
Ccdc87Q8CDL9 Gm32816-202ENSMUST00000206497 496 ntTSL 5 BASIC8.14□□□□□ -1.11
Ccdc87Q8CDL9 Gm18060-201ENSMUST00000207407 564 ntBASIC8.14□□□□□ -1.11
Ccdc87Q8CDL9 4930442G15Rik-201ENSMUST00000213112 1000 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Ccdc87Q8CDL9 AC158799.1-201ENSMUST00000214686 617 ntTSL 5 BASIC8.14□□□□□ -1.11
Ccdc87Q8CDL9 4930579P08Rik-201ENSMUST00000218193 1227 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Ccdc87Q8CDL9 AC163041.2-201ENSMUST00000223082 573 ntBASIC8.14□□□□□ -1.11
Ccdc87Q8CDL9 AC207128.2-202ENSMUST00000224010 808 ntBASIC8.14□□□□□ -1.11
Ccdc87Q8CDL9 Prap1-201ENSMUST00000026540 620 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Ccdc87Q8CDL9 Tmem225-201ENSMUST00000046333 993 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Ccdc87Q8CDL9 Lyrm2-201ENSMUST00000062802 465 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Ccdc87Q8CDL9 Olfr143-201ENSMUST00000093865 942 ntAPPRIS P2 BASIC8.14□□□□□ -1.11
Ccdc87Q8CDL9 Gm37745-201ENSMUST00000193304 8163 ntBASIC8.14□□□□□ -1.11
Ccdc87Q8CDL9 Atp2b4-207ENSMUST00000165602 8101 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
Ccdc87Q8CDL9 Pdgfd-201ENSMUST00000058692 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
Ccdc87Q8CDL9 Gm44249-201ENSMUST00000204538 1805 ntBASIC8.14□□□□□ -1.11
Ccdc87Q8CDL9 Fam19a1-201ENSMUST00000075080 2411 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Ccdc87Q8CDL9 Tmod2-206ENSMUST00000215036 1797 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Ccdc87Q8CDL9 Pogz-203ENSMUST00000107266 4100 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
Ccdc87Q8CDL9 Gm13856-201ENSMUST00000126498 1742 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Ccdc87Q8CDL9 Olfr119-202ENSMUST00000213732 1722 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
Ccdc87Q8CDL9 Lnpep-201ENSMUST00000041047 5181 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Ccdc87Q8CDL9 2010310C07Rik-201ENSMUST00000187172 2226 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Ccdc87Q8CDL9 Vcan-206ENSMUST00000159910 8332 ntTSL 5 BASIC8.14□□□□□ -1.11
Ccdc87Q8CDL9 Mef2c-222ENSMUST00000199019 4441 ntTSL 5 BASIC8.14□□□□□ -1.11
Ccdc87Q8CDL9 Gm44916-201ENSMUST00000208664 2194 ntBASIC8.14□□□□□ -1.11
Ccdc87Q8CDL9 Pdzd9-201ENSMUST00000033178 2180 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Ccdc87Q8CDL9 Gm28240-201ENSMUST00000187560 2053 ntBASIC8.14□□□□□ -1.11
Ccdc87Q8CDL9 Plch1-202ENSMUST00000059973 6241 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
Ccdc87Q8CDL9 Atp2b4-201ENSMUST00000048953 8292 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
Ccdc87Q8CDL9 Mak-206ENSMUST00000225084 3573 ntAPPRIS ALT2 BASIC8.14□□□□□ -1.11
Ccdc87Q8CDL9 Il15ra-217ENSMUST00000148748 1542 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Ccdc87Q8CDL9 Prkacb-201ENSMUST00000005164 4001 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Ccdc87Q8CDL9 Gm43123-201ENSMUST00000201893 3471 ntBASIC8.13□□□□□ -1.11
Ccdc87Q8CDL9 Olfr1272-202ENSMUST00000117141 2442 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Ccdc87Q8CDL9 Slc12a1-202ENSMUST00000110494 4740 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
Ccdc87Q8CDL9 Gm32305-201ENSMUST00000221742 1899 ntTSL 5 BASIC8.13□□□□□ -1.11
Ccdc87Q8CDL9 Zfp870-201ENSMUST00000178401 5126 ntTSL 5 BASIC8.13□□□□□ -1.11
Ccdc87Q8CDL9 Sncaip-206ENSMUST00000178678 3724 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Ccdc87Q8CDL9 Wdr76-204ENSMUST00000110603 2341 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
Ccdc87Q8CDL9 Usp8-202ENSMUST00000110416 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Ccdc87Q8CDL9 Mkl2-204ENSMUST00000149359 8295 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
Ccdc87Q8CDL9 Gm45407-201ENSMUST00000209499 3676 ntBASIC8.13□□□□□ -1.11
Ccdc87Q8CDL9 Lrrc40-201ENSMUST00000072080 4142 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Ccdc87Q8CDL9 Fv1-201ENSMUST00000094481 1380 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
Ccdc87Q8CDL9 Olfr316-202ENSMUST00000215071 2719 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Ccdc87Q8CDL9 Mstn-201ENSMUST00000027269 2705 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Ccdc87Q8CDL9 Glrx-204ENSMUST00000223120 1333 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Ccdc87Q8CDL9 Gm6820-201ENSMUST00000188803 2173 ntBASIC8.13□□□□□ -1.11
Ccdc87Q8CDL9 Phlpp2-201ENSMUST00000034175 7839 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Ccdc87Q8CDL9 Gm21152-201ENSMUST00000190271 3483 ntBASIC8.13□□□□□ -1.11
Ccdc87Q8CDL9 Gm3591-201ENSMUST00000164408 1745 ntAPPRIS P5 TSL 5 BASIC8.13□□□□□ -1.11
Ccdc87Q8CDL9 Gm649-201ENSMUST00000117284 1054 ntBASIC8.13□□□□□ -1.11
Ccdc87Q8CDL9 Gm14528-201ENSMUST00000120615 231 ntBASIC8.13□□□□□ -1.11
Ccdc87Q8CDL9 Gm13389-201ENSMUST00000142774 639 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Ccdc87Q8CDL9 Gm22811-201ENSMUST00000157468 154 ntBASIC8.13□□□□□ -1.11
Ccdc87Q8CDL9 Cd180-202ENSMUST00000167144 430 ntTSL 2 BASIC8.13□□□□□ -1.11
Ccdc87Q8CDL9 Gm26736-201ENSMUST00000180425 1236 ntBASIC8.13□□□□□ -1.11
Ccdc87Q8CDL9 Rnf170-ps-201ENSMUST00000181188 859 ntBASIC8.13□□□□□ -1.11
Ccdc87Q8CDL9 Gm14214-201ENSMUST00000184654 678 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
Ccdc87Q8CDL9 Gm29240-201ENSMUST00000187248 286 ntBASIC8.13□□□□□ -1.11
Ccdc87Q8CDL9 Gm29462-201ENSMUST00000191458 288 ntBASIC8.13□□□□□ -1.11
Ccdc87Q8CDL9 Gm38164-201ENSMUST00000192810 330 ntBASIC8.13□□□□□ -1.11
Ccdc87Q8CDL9 C630050I24Rik-201ENSMUST00000193420 783 ntBASIC8.13□□□□□ -1.11
Ccdc87Q8CDL9 Gm43664-201ENSMUST00000196038 734 ntBASIC8.13□□□□□ -1.11
Ccdc87Q8CDL9 Gm42782-201ENSMUST00000197286 522 ntBASIC8.13□□□□□ -1.11
Ccdc87Q8CDL9 Gm43471-201ENSMUST00000197550 467 ntBASIC8.13□□□□□ -1.11
Ccdc87Q8CDL9 Gm3604-203ENSMUST00000202194 736 ntTSL 3 BASIC8.13□□□□□ -1.11
Ccdc87Q8CDL9 Gm44096-201ENSMUST00000203171 504 ntTSL 2 BASIC8.13□□□□□ -1.11
Ccdc87Q8CDL9 Gm9689-201ENSMUST00000210009 428 ntBASIC8.13□□□□□ -1.11
Ccdc87Q8CDL9 Gm45408-201ENSMUST00000211080 390 ntTSL 5 BASIC8.13□□□□□ -1.11
Ccdc87Q8CDL9 AC132384.6-201ENSMUST00000218976 1206 ntBASIC8.13□□□□□ -1.11
Ccdc87Q8CDL9 Gm7762-201ENSMUST00000220595 604 ntTSL 3 BASIC8.13□□□□□ -1.11
Ccdc87Q8CDL9 AC107453.3-201ENSMUST00000228205 639 ntBASIC8.13□□□□□ -1.11
Ccdc87Q8CDL9 Phf3-201ENSMUST00000088310 7561 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Ccdc87Q8CDL9 AC153955.2-201ENSMUST00000216739 4129 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Ccdc87Q8CDL9 Sfmbt2-205ENSMUST00000116594 7821 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
Ccdc87Q8CDL9 Gm45807-201ENSMUST00000209142 2874 ntBASIC8.13□□□□□ -1.11
Ccdc87Q8CDL9 Gm13301-201ENSMUST00000121728 2446 ntBASIC8.13□□□□□ -1.11
Ccdc87Q8CDL9 Sema3d-205ENSMUST00000197927 3207 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Ccdc87Q8CDL9 Gm45194-202ENSMUST00000207962 1991 ntAPPRIS P5 TSL 5 BASIC8.13□□□□□ -1.11
Ccdc87Q8CDL9 AC154903.1-201ENSMUST00000222121 2705 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Ccdc87Q8CDL9 Gm2694-201ENSMUST00000180700 2314 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Ccdc87Q8CDL9 Aldh18a1-207ENSMUST00000176939 3427 ntAPPRIS ALT1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Ccdc87Q8CDL9 1810011H11Rik-201ENSMUST00000039191 1489 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Ccdc87Q8CDL9 Gm29660-201ENSMUST00000185631 2166 ntTSL 5 BASIC8.12□□□□□ -1.11
Ccdc87Q8CDL9 Gm29309-201ENSMUST00000186251 2166 ntTSL 5 BASIC8.12□□□□□ -1.11
Ccdc87Q8CDL9 Gm28317-201ENSMUST00000187200 2166 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Ccdc87Q8CDL9 Gm28254-201ENSMUST00000189207 2166 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 72.7 ms