Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Gm18726-201ENSMUST00000218175 2010 ntBASIC9.84□□□□□ -0.83
Col16a1Q8BLX7 Mon2-203ENSMUST00000170935 5302 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Col16a1Q8BLX7 Spag11b-202ENSMUST00000110767 1740 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Col16a1Q8BLX7 Ermard-201ENSMUST00000040594 1571 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Col16a1Q8BLX7 Abr-201ENSMUST00000065028 4444 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Col16a1Q8BLX7 4930578G10Rik-202ENSMUST00000107984 762 ntAPPRIS P1 TSL 2 BASIC9.84□□□□□ -0.83
Col16a1Q8BLX7 Gm16984-201ENSMUST00000130003 982 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Col16a1Q8BLX7 2610204G07Rik-201ENSMUST00000131215 992 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Col16a1Q8BLX7 Gm6507-201ENSMUST00000159767 652 ntTSL 3 BASIC9.84□□□□□ -0.83
Col16a1Q8BLX7 Six3os1-204ENSMUST00000161688 567 ntTSL 3 BASIC9.84□□□□□ -0.83
Col16a1Q8BLX7 Slc25a5-ps-201ENSMUST00000162199 826 ntBASIC9.84□□□□□ -0.83
Col16a1Q8BLX7 Gm3326-201ENSMUST00000164656 1043 ntBASIC9.84□□□□□ -0.83
Col16a1Q8BLX7 Gm3344-201ENSMUST00000169610 603 ntBASIC9.84□□□□□ -0.83
Col16a1Q8BLX7 Gm8183-201ENSMUST00000183134 980 ntBASIC9.84□□□□□ -0.83
Col16a1Q8BLX7 Gm27186-201ENSMUST00000184223 307 ntBASIC9.84□□□□□ -0.83
Col16a1Q8BLX7 Gm21877-201ENSMUST00000185640 694 ntBASIC9.84□□□□□ -0.83
Col16a1Q8BLX7 1700044C05Rik-201ENSMUST00000186060 898 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Col16a1Q8BLX7 1700094M23Rik-202ENSMUST00000198047 675 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Col16a1Q8BLX7 Traf1-209ENSMUST00000201690 386 ntTSL 3 BASIC9.84□□□□□ -0.83
Col16a1Q8BLX7 Gm44162-201ENSMUST00000203543 544 ntBASIC9.84□□□□□ -0.83
Col16a1Q8BLX7 4930455C13Rik-201ENSMUST00000218108 1018 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Col16a1Q8BLX7 AC153152.2-201ENSMUST00000223165 959 ntBASIC9.84□□□□□ -0.83
Col16a1Q8BLX7 Ube2c-202ENSMUST00000088248 967 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Col16a1Q8BLX7 Olfr1254-201ENSMUST00000099764 945 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
Col16a1Q8BLX7 Idua-202ENSMUST00000112563 3373 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Col16a1Q8BLX7 Grik2-204ENSMUST00000218441 3083 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Col16a1Q8BLX7 Tpd52l2-204ENSMUST00000108800 3475 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Col16a1Q8BLX7 Gm43890-201ENSMUST00000203437 2799 ntBASIC9.83□□□□□ -0.84
Col16a1Q8BLX7 Col6a6-203ENSMUST00000166431 7098 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
Col16a1Q8BLX7 Gm43430-201ENSMUST00000196513 3897 ntBASIC9.83□□□□□ -0.84
Col16a1Q8BLX7 Phxr4-202ENSMUST00000216590 1391 ntBASIC9.83□□□□□ -0.84
Col16a1Q8BLX7 Aph1b-201ENSMUST00000034934 4910 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Col16a1Q8BLX7 3110035E14Rik-201ENSMUST00000088666 3256 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Col16a1Q8BLX7 Clip4-201ENSMUST00000024854 4055 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Col16a1Q8BLX7 Cdh23-205ENSMUST00000105464 11090 ntAPPRIS P2 TSL 5 BASIC9.83□□□□□ -0.84
Col16a1Q8BLX7 Olfr1241-203ENSMUST00000215055 2441 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Col16a1Q8BLX7 Gm29398-201ENSMUST00000186355 1491 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Col16a1Q8BLX7 Armcx3-201ENSMUST00000081834 3327 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Col16a1Q8BLX7 St8sia4-201ENSMUST00000043336 5390 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Col16a1Q8BLX7 Plxdc2-201ENSMUST00000028081 6947 ntAPPRIS P2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Col16a1Q8BLX7 Gm42514-201ENSMUST00000196636 1832 ntBASIC9.83□□□□□ -0.84
Col16a1Q8BLX7 Apobec3-202ENSMUST00000109620 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Col16a1Q8BLX7 Sorbs2-222ENSMUST00000141039 1699 ntTSL 5 BASIC9.83□□□□□ -0.84
Col16a1Q8BLX7 Gm34923-201ENSMUST00000222673 5043 ntTSL 5 BASIC9.83□□□□□ -0.84
Col16a1Q8BLX7 Pde10a-211ENSMUST00000149440 4897 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Col16a1Q8BLX7 Gm42669-202ENSMUST00000160160 3080 ntAPPRIS P1 TSL 2 BASIC9.83□□□□□ -0.84
Col16a1Q8BLX7 Gm45174-201ENSMUST00000208884 3065 ntBASIC9.83□□□□□ -0.84
Col16a1Q8BLX7 Trav8-2-201ENSMUST00000130122 337 ntBASIC9.83□□□□□ -0.84
Col16a1Q8BLX7 Gm43048-201ENSMUST00000196101 388 ntBASIC9.83□□□□□ -0.84
Col16a1Q8BLX7 Gm6213-201ENSMUST00000209966 638 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Col16a1Q8BLX7 AC123665.3-201ENSMUST00000228735 1216 ntBASIC9.83□□□□□ -0.84
Col16a1Q8BLX7 Il20-201ENSMUST00000027673 1186 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Col16a1Q8BLX7 Hamp2-201ENSMUST00000074671 420 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Col16a1Q8BLX7 Il17rd-201ENSMUST00000035336 8280 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Col16a1Q8BLX7 Olfr600-202ENSMUST00000215042 3527 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Col16a1Q8BLX7 Gm3512-202ENSMUST00000172431 1861 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Col16a1Q8BLX7 Il9r-205ENSMUST00000145401 4482 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
Col16a1Q8BLX7 Acsm5-201ENSMUST00000066465 2981 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Col16a1Q8BLX7 Ap2b1-205ENSMUST00000176430 3596 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Col16a1Q8BLX7 Upf3b-201ENSMUST00000076265 2344 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Col16a1Q8BLX7 Gm9048-201ENSMUST00000177744 2409 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
Col16a1Q8BLX7 Gm9040-201ENSMUST00000177762 2409 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
Col16a1Q8BLX7 Gm9044-201ENSMUST00000179851 2409 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
Col16a1Q8BLX7 Olfr1509-202ENSMUST00000205900 2444 ntAPPRIS P1 TSL 3 BASIC9.82□□□□□ -0.84
Col16a1Q8BLX7 Gm9046-201ENSMUST00000218329 2409 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
Col16a1Q8BLX7 2600014E21Rik-201ENSMUST00000186411 4805 ntTSL 5 BASIC9.82□□□□□ -0.84
Col16a1Q8BLX7 Erbb3-201ENSMUST00000082059 6016 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Col16a1Q8BLX7 Chrnb4-201ENSMUST00000034854 3723 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Col16a1Q8BLX7 Gm43123-201ENSMUST00000201893 3471 ntBASIC9.82□□□□□ -0.84
Col16a1Q8BLX7 Olfr775-202ENSMUST00000214109 3598 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Col16a1Q8BLX7 Gm44531-201ENSMUST00000208364 2000 ntBASIC9.82□□□□□ -0.84
Col16a1Q8BLX7 Gramd1c-204ENSMUST00000214098 2046 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Col16a1Q8BLX7 Pah-201ENSMUST00000020241 2142 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Col16a1Q8BLX7 Dleu2-207ENSMUST00000182756 3530 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Col16a1Q8BLX7 C1s1-204ENSMUST00000162443 2906 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Col16a1Q8BLX7 Creb1-202ENSMUST00000087366 8364 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Col16a1Q8BLX7 Gm37520-201ENSMUST00000194883 2672 ntBASIC9.82□□□□□ -0.84
Col16a1Q8BLX7 Gm10840-201ENSMUST00000100326 309 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
Col16a1Q8BLX7 Trav9-2-201ENSMUST00000103654 563 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
Col16a1Q8BLX7 Slc35a5-202ENSMUST00000114600 679 ntTSL 3 BASIC9.82□□□□□ -0.84
Col16a1Q8BLX7 Gm8662-201ENSMUST00000118644 574 ntBASIC9.82□□□□□ -0.84
Col16a1Q8BLX7 Gm7494-201ENSMUST00000121248 441 ntBASIC9.82□□□□□ -0.84
Col16a1Q8BLX7 Gm13282-201ENSMUST00000121577 545 ntBASIC9.82□□□□□ -0.84
Col16a1Q8BLX7 Gm35202-201ENSMUST00000130083 712 ntTSL 2 BASIC9.82□□□□□ -0.84
Col16a1Q8BLX7 Gm14376-201ENSMUST00000145297 297 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Col16a1Q8BLX7 Gm16754-202ENSMUST00000193429 508 ntTSL 3 BASIC9.82□□□□□ -0.84
Col16a1Q8BLX7 Gm1969-201ENSMUST00000198125 1220 ntBASIC9.82□□□□□ -0.84
Col16a1Q8BLX7 Olfr32-206ENSMUST00000215765 1241 ntAPPRIS P1 TSL 3 BASIC9.82□□□□□ -0.84
Col16a1Q8BLX7 Sfrp4-204ENSMUST00000222992 1062 ntTSL 5 BASIC9.82□□□□□ -0.84
Col16a1Q8BLX7 Gsta4-201ENSMUST00000034903 977 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Col16a1Q8BLX7 Olfr32-201ENSMUST00000099755 1016 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
Col16a1Q8BLX7 Ssbp1-202ENSMUST00000114779 4398 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Col16a1Q8BLX7 Myh11-201ENSMUST00000090287 6632 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Col16a1Q8BLX7 Adcy7-201ENSMUST00000098521 5937 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Col16a1Q8BLX7 Usp40-204ENSMUST00000187758 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Col16a1Q8BLX7 Adam22-204ENSMUST00000088761 9077 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Col16a1Q8BLX7 Meis2-205ENSMUST00000110907 3718 ntAPPRIS ALT1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Col16a1Q8BLX7 Xpo4-201ENSMUST00000089482 3456 ntAPPRIS ALT1 TSL 5 BASIC9.82□□□□□ -0.84
Col16a1Q8BLX7 Usp15-201ENSMUST00000020334 4666 ntAPPRIS ALT1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Col16a1Q8BLX7 Atp6v1a-202ENSMUST00000114666 4234 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 161 ms