Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Hamp2-201ENSMUST00000074671 420 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Rif1Q6PR54 Vpreb3-201ENSMUST00000000926 625 ntAPPRIS P2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Rif1Q6PR54 Anapc15-ps-201ENSMUST00000099328 426 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
Rif1Q6PR54 Gsdmc3-202ENSMUST00000185526 2179 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Rif1Q6PR54 Gm44280-201ENSMUST00000204498 3111 ntBASIC6.56□□□□□ -1.36
Rif1Q6PR54 Cast-202ENSMUST00000220738 1653 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Rif1Q6PR54 Pik3c3-202ENSMUST00000115811 3084 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Rif1Q6PR54 Slc25a13-201ENSMUST00000015256 3067 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Rif1Q6PR54 Tpk1-203ENSMUST00000114644 2148 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Rif1Q6PR54 Gria1-204ENSMUST00000151045 5361 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Rif1Q6PR54 Olfr55-204ENSMUST00000216633 4758 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Rif1Q6PR54 Gm37842-201ENSMUST00000192330 1569 ntBASIC6.55□□□□□ -1.36
Rif1Q6PR54 Wdr11-201ENSMUST00000084519 4550 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Rif1Q6PR54 Limch1-203ENSMUST00000117601 3157 ntTSL 5 BASIC6.55□□□□□ -1.36
Rif1Q6PR54 Sirpb1b-201ENSMUST00000091319 1499 ntAPPRIS P2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Rif1Q6PR54 Cth-201ENSMUST00000118539 1815 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Rif1Q6PR54 Gm37052-201ENSMUST00000194929 1831 ntBASIC6.55□□□□□ -1.36
Rif1Q6PR54 Gm16239-201ENSMUST00000160182 2635 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Rif1Q6PR54 Nit1-201ENSMUST00000111289 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Rif1Q6PR54 Tmem33-202ENSMUST00000160352 5322 ntAPPRIS ALT1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Rif1Q6PR54 AC102431.2-201ENSMUST00000224071 2448 ntBASIC6.55□□□□□ -1.36
Rif1Q6PR54 Defa-ps7-201ENSMUST00000117139 168 ntBASIC6.55□□□□□ -1.36
Rif1Q6PR54 Gm12778-201ENSMUST00000122341 333 ntBASIC6.55□□□□□ -1.36
Rif1Q6PR54 Gm12147-201ENSMUST00000144024 182 ntTSL 3 BASIC6.55□□□□□ -1.36
Rif1Q6PR54 Mir3062-201ENSMUST00000174986 105 ntBASIC6.55□□□□□ -1.36
Rif1Q6PR54 4930426I24Rik-201ENSMUST00000180709 601 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Rif1Q6PR54 Gm27014-201ENSMUST00000182658 937 ntBASIC6.55□□□□□ -1.36
Rif1Q6PR54 1700122D07Rik-201ENSMUST00000186973 421 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Rif1Q6PR54 Gm19708-201ENSMUST00000199386 543 ntTSL 2 BASIC6.55□□□□□ -1.36
Rif1Q6PR54 AC121821.1-201ENSMUST00000199921 111 ntBASIC6.55□□□□□ -1.36
Rif1Q6PR54 1700094M24Rik-201ENSMUST00000203771 665 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Rif1Q6PR54 AC165155.1-201ENSMUST00000228932 445 ntBASIC6.55□□□□□ -1.36
Rif1Q6PR54 Fto-204ENSMUST00000136802 3751 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Rif1Q6PR54 AC122402.1-201ENSMUST00000225199 2303 ntBASIC6.55□□□□□ -1.36
Rif1Q6PR54 Vps8-201ENSMUST00000096191 4952 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Rif1Q6PR54 Dync2h1-202ENSMUST00000139115 2892 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Rif1Q6PR54 Ctnna2-201ENSMUST00000075340 2864 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Rif1Q6PR54 Pfkfb3-214ENSMUST00000179584 4756 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Rif1Q6PR54 Abca9-201ENSMUST00000044850 6384 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Rif1Q6PR54 Cd44-204ENSMUST00000111190 1412 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Rif1Q6PR54 Ugt1a6b-202ENSMUST00000113138 2303 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Rif1Q6PR54 Arf4-202ENSMUST00000112318 1367 ntTSL 5 BASIC6.55□□□□□ -1.36
Rif1Q6PR54 Iars-206ENSMUST00000165316 4426 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Rif1Q6PR54 Adal-202ENSMUST00000066155 2298 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Rif1Q6PR54 Gm37818-201ENSMUST00000194952 3169 ntBASIC6.55□□□□□ -1.36
Rif1Q6PR54 Zfp60-202ENSMUST00000108336 5896 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Rif1Q6PR54 Timd2-202ENSMUST00000109225 2236 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Rif1Q6PR54 C87499-201ENSMUST00000053304 1901 ntAPPRIS P2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Rif1Q6PR54 Gm18716-201ENSMUST00000204507 1603 ntBASIC6.55□□□□□ -1.36
Rif1Q6PR54 Rgn-201ENSMUST00000023832 1607 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Rif1Q6PR54 Ppp1r9a-212ENSMUST00000177456 3975 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
Rif1Q6PR54 Tmem181b-ps-202ENSMUST00000180035 2426 ntTSL 5 BASIC6.55□□□□□ -1.36
Rif1Q6PR54 Gm16208-201ENSMUST00000128476 471 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Rif1Q6PR54 Gm14097-201ENSMUST00000147868 470 ntTSL 3 BASIC6.55□□□□□ -1.36
Rif1Q6PR54 Gm15392-201ENSMUST00000152863 778 ntTSL 3 BASIC6.55□□□□□ -1.36
Rif1Q6PR54 Gm24838-201ENSMUST00000158684 130 ntBASIC6.55□□□□□ -1.36
Rif1Q6PR54 Gm21241-201ENSMUST00000179551 934 ntBASIC6.55□□□□□ -1.36
Rif1Q6PR54 Gm26641-201ENSMUST00000181499 954 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Rif1Q6PR54 Gm28821-201ENSMUST00000185637 610 ntTSL 3 BASIC6.55□□□□□ -1.36
Rif1Q6PR54 Gm29582-201ENSMUST00000185667 931 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Rif1Q6PR54 Gm20838-202ENSMUST00000187712 931 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Rif1Q6PR54 1700040F15Rik-201ENSMUST00000188244 931 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Rif1Q6PR54 Gm21996-201ENSMUST00000188269 931 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Rif1Q6PR54 Gm21256-202ENSMUST00000188881 932 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Rif1Q6PR54 Gm21739-202ENSMUST00000188917 933 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Rif1Q6PR54 Gm28891-202ENSMUST00000189333 927 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Rif1Q6PR54 Scgb1b5-ps-201ENSMUST00000189491 280 ntBASIC6.55□□□□□ -1.36
Rif1Q6PR54 Gm21094-202ENSMUST00000189577 926 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Rif1Q6PR54 Gm20792-201ENSMUST00000189765 931 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Rif1Q6PR54 Gm28919-201ENSMUST00000190026 920 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Rif1Q6PR54 Gm21861-202ENSMUST00000190806 931 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Rif1Q6PR54 Gm20819-201ENSMUST00000191091 925 ntBASIC6.55□□□□□ -1.36
Rif1Q6PR54 Gm20871-201ENSMUST00000191322 931 ntBASIC6.55□□□□□ -1.36
Rif1Q6PR54 Gm21865-202ENSMUST00000191443 923 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Rif1Q6PR54 Gm30737-201ENSMUST00000192683 923 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Rif1Q6PR54 Gm35134-201ENSMUST00000194086 923 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Rif1Q6PR54 Sprr2k-201ENSMUST00000067102 637 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Rif1Q6PR54 Spink13-201ENSMUST00000097557 796 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Rif1Q6PR54 AC140393.1-202ENSMUST00000228347 1818 ntBASIC6.55□□□□□ -1.36
Rif1Q6PR54 Zfp819-201ENSMUST00000032661 2362 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Rif1Q6PR54 Slc2a9-210ENSMUST00000155634 3164 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
Rif1Q6PR54 Ptpre-204ENSMUST00000209979 4959 ntAPPRIS ALT1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Rif1Q6PR54 Adgrl3-207ENSMUST00000118078 4871 ntTSL 5 BASIC6.54□□□□□ -1.36
Rif1Q6PR54 Itpr1-201ENSMUST00000032192 9870 ntAPPRIS P2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Rif1Q6PR54 Olfr954-202ENSMUST00000214818 3299 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
Rif1Q6PR54 Kirrel3os-201ENSMUST00000066604 3799 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Rif1Q6PR54 Gm37499-201ENSMUST00000194683 3478 ntBASIC6.54□□□□□ -1.36
Rif1Q6PR54 Kbtbd4-201ENSMUST00000090682 2437 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
Rif1Q6PR54 Gm44570-201ENSMUST00000207526 3698 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Rif1Q6PR54 Gm16204-201ENSMUST00000117864 1897 ntBASIC6.54□□□□□ -1.36
Rif1Q6PR54 Olfr6-201ENSMUST00000040983 6834 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Rif1Q6PR54 Fmr1-203ENSMUST00000114654 4061 ntAPPRIS ALT1 TSL 5 BASIC6.54□□□□□ -1.36
Rif1Q6PR54 D930016D06Rik-202ENSMUST00000181620 3805 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Rif1Q6PR54 Gm37315-201ENSMUST00000194347 3479 ntBASIC6.54□□□□□ -1.36
Rif1Q6PR54 Slc12a1-203ENSMUST00000110495 4642 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
Rif1Q6PR54 Tifab-202ENSMUST00000225063 2718 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Rif1Q6PR54 Cd84-204ENSMUST00000136479 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Rif1Q6PR54 Gm10804-201ENSMUST00000099693 2244 ntTSL 2 BASIC6.54□□□□□ -1.36
Rif1Q6PR54 Ces2c-201ENSMUST00000055052 1970 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Rif1Q6PR54 Cd209d-201ENSMUST00000011445 919 ntAPPRIS P2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 65.1 ms