Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Sema3a-202ENSMUST00000095012 4085 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Hmgb3O54879 AC153729.1-201ENSMUST00000214055 2562 ntBASIC6.14□□□□□ -1.43
Hmgb3O54879 Myot-202ENSMUST00000115498 2087 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Hmgb3O54879 Gm43161-201ENSMUST00000197020 1688 ntBASIC6.14□□□□□ -1.43
Hmgb3O54879 Il1f5-201ENSMUST00000028360 2842 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Hmgb3O54879 Zfp963-201ENSMUST00000130458 2291 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Hmgb3O54879 Akap11-202ENSMUST00000123853 9364 ntAPPRIS P3 TSL 5 BASIC6.14□□□□□ -1.43
Hmgb3O54879 Gm36757-201ENSMUST00000221818 3556 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Hmgb3O54879 A830082K12Rik-207ENSMUST00000183171 4176 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Hmgb3O54879 Clrn1-202ENSMUST00000055636 3083 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Hmgb3O54879 Csde1-201ENSMUST00000029446 4318 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
Hmgb3O54879 Trim12c-202ENSMUST00000130139 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Hmgb3O54879 Ppm1k-201ENSMUST00000042766 5560 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Hmgb3O54879 F2rl2-201ENSMUST00000022182 2502 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Hmgb3O54879 8430423G03Rik-201ENSMUST00000110507 639 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Hmgb3O54879 Rpsa-ps3-201ENSMUST00000117789 876 ntBASIC6.14□□□□□ -1.43
Hmgb3O54879 Gm12529-201ENSMUST00000119529 268 ntBASIC6.14□□□□□ -1.43
Hmgb3O54879 Gm14328-201ENSMUST00000122178 408 ntBASIC6.14□□□□□ -1.43
Hmgb3O54879 Gm15736-201ENSMUST00000141710 420 ntTSL 3 BASIC6.14□□□□□ -1.43
Hmgb3O54879 Gm15086-201ENSMUST00000143110 573 ntTSL 5 BASIC6.14□□□□□ -1.43
Hmgb3O54879 Kcnd3os-202ENSMUST00000143893 718 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Hmgb3O54879 Alg13-207ENSMUST00000149330 479 ntTSL 2 BASIC6.14□□□□□ -1.43
Hmgb3O54879 Gm12746-201ENSMUST00000151369 615 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Hmgb3O54879 Gm22202-201ENSMUST00000158608 311 ntBASIC6.14□□□□□ -1.43
Hmgb3O54879 Gm17157-201ENSMUST00000172397 348 ntBASIC6.14□□□□□ -1.43
Hmgb3O54879 Gm23187-201ENSMUST00000175746 86 ntBASIC6.14□□□□□ -1.43
Hmgb3O54879 Vmn2r-ps52-201ENSMUST00000176211 612 ntBASIC6.14□□□□□ -1.43
Hmgb3O54879 Gm25193-201ENSMUST00000176615 97 ntBASIC6.14□□□□□ -1.43
Hmgb3O54879 Gm20616-201ENSMUST00000177262 716 ntTSL 3 BASIC6.14□□□□□ -1.43
Hmgb3O54879 Gm15100-201ENSMUST00000180357 573 ntTSL 5 BASIC6.14□□□□□ -1.43
Hmgb3O54879 Gm28609-201ENSMUST00000186515 463 ntTSL 3 BASIC6.14□□□□□ -1.43
Hmgb3O54879 Gm7891-201ENSMUST00000190284 843 ntBASIC6.14□□□□□ -1.43
Hmgb3O54879 Gm44245-201ENSMUST00000204304 232 ntBASIC6.14□□□□□ -1.43
Hmgb3O54879 AC162893.1-201ENSMUST00000207732 1085 ntBASIC6.14□□□□□ -1.43
Hmgb3O54879 Gm42402-201ENSMUST00000208341 1054 ntBASIC6.14□□□□□ -1.43
Hmgb3O54879 Pvrig-201ENSMUST00000211088 1080 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Hmgb3O54879 Gm6150-201ENSMUST00000217775 577 ntBASIC6.14□□□□□ -1.43
Hmgb3O54879 Gm46313-201ENSMUST00000220463 547 ntBASIC6.14□□□□□ -1.43
Hmgb3O54879 Gm32834-202ENSMUST00000222417 655 ntTSL 3 BASIC6.14□□□□□ -1.43
Hmgb3O54879 Gzma-202ENSMUST00000224282 996 ntAPPRIS ALT2 BASIC6.14□□□□□ -1.43
Hmgb3O54879 Psors1c2-201ENSMUST00000025273 843 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Hmgb3O54879 Ndufa4-201ENSMUST00000031637 468 ntTSL 3 BASIC6.14□□□□□ -1.43
Hmgb3O54879 Gsta2-201ENSMUST00000034902 870 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Hmgb3O54879 Krtap3-1-201ENSMUST00000055502 604 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Hmgb3O54879 Olfr1132-201ENSMUST00000090711 927 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Hmgb3O54879 Olfr1211-201ENSMUST00000099808 936 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Hmgb3O54879 Dgkk-201ENSMUST00000067410 7155 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Hmgb3O54879 Ranbp6-201ENSMUST00000099525 4575 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Hmgb3O54879 Slc22a19-201ENSMUST00000025666 1998 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Hmgb3O54879 Dennd6a-203ENSMUST00000224111 2692 ntBASIC6.14□□□□□ -1.43
Hmgb3O54879 Trim60-201ENSMUST00000048565 2670 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Hmgb3O54879 Gm9105-201ENSMUST00000120160 1398 ntBASIC6.14□□□□□ -1.43
Hmgb3O54879 Pla2g4c-ps-201ENSMUST00000204668 1364 ntBASIC6.14□□□□□ -1.43
Hmgb3O54879 Ice2-201ENSMUST00000034761 4169 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Hmgb3O54879 AC183268.1-201ENSMUST00000215753 2837 ntBASIC6.14□□□□□ -1.43
Hmgb3O54879 Zcchc7-208ENSMUST00000147272 4251 ntTSL 2 BASIC6.14□□□□□ -1.43
Hmgb3O54879 Abcc2-201ENSMUST00000026208 8027 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Hmgb3O54879 Vwa3b-206ENSMUST00000169057 1499 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
Hmgb3O54879 Gm44116-201ENSMUST00000204269 1525 ntBASIC6.14□□□□□ -1.43
Hmgb3O54879 2900064K03Rik-201ENSMUST00000196567 3113 ntBASIC6.14□□□□□ -1.43
Hmgb3O54879 Gm16072-201ENSMUST00000119574 2377 ntBASIC6.14□□□□□ -1.43
Hmgb3O54879 Cntn1-202ENSMUST00000068378 3964 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Hmgb3O54879 Hsd11b1-201ENSMUST00000016338 1623 ntAPPRIS P2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Hmgb3O54879 Steap2-209ENSMUST00000164219 10089 ntAPPRIS P1 TSL 3 BASIC6.14□□□□□ -1.43
Hmgb3O54879 Lrrc63-201ENSMUST00000022574 2517 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Hmgb3O54879 Slc22a8-202ENSMUST00000170817 3398 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Hmgb3O54879 Drp2-203ENSMUST00000113226 3499 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Hmgb3O54879 Gm15448-203ENSMUST00000108620 1828 ntTSL 5 BASIC6.13□□□□□ -1.43
Hmgb3O54879 Dlg2-204ENSMUST00000107196 7490 ntAPPRIS P2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Hmgb3O54879 Vmn1r44-204ENSMUST00000226171 1877 ntBASIC6.13□□□□□ -1.43
Hmgb3O54879 Nup93-202ENSMUST00000109547 2847 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Hmgb3O54879 4930590J08Rik-201ENSMUST00000059318 2802 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Hmgb3O54879 Tdrkh-202ENSMUST00000166032 5692 ntAPPRIS P2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Hmgb3O54879 Dennd4c-204ENSMUST00000142837 5870 ntAPPRIS P2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Hmgb3O54879 Olfr43-202ENSMUST00000205664 2018 ntAPPRIS P1 TSL 3 BASIC6.13□□□□□ -1.43
Hmgb3O54879 Gm36930-201ENSMUST00000195431 2376 ntBASIC6.13□□□□□ -1.43
Hmgb3O54879 Myo3b-201ENSMUST00000060208 6256 ntAPPRIS P2 TSL 5 BASIC6.13□□□□□ -1.43
Hmgb3O54879 Gm26209-201ENSMUST00000103852 110 ntBASIC6.13□□□□□ -1.43
Hmgb3O54879 Ifna16-201ENSMUST00000105148 1010 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Hmgb3O54879 Fam166b-202ENSMUST00000107928 762 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
Hmgb3O54879 Swi5-202ENSMUST00000113395 712 ntAPPRIS P3 TSL 5 BASIC6.13□□□□□ -1.43
Hmgb3O54879 Gm12838-201ENSMUST00000116278 325 ntBASIC6.13□□□□□ -1.43
Hmgb3O54879 Gm8832-201ENSMUST00000119890 395 ntBASIC6.13□□□□□ -1.43
Hmgb3O54879 Gm14450-201ENSMUST00000119984 240 ntBASIC6.13□□□□□ -1.43
Hmgb3O54879 Gm11895-201ENSMUST00000122165 467 ntBASIC6.13□□□□□ -1.43
Hmgb3O54879 Gm24597-201ENSMUST00000122503 300 ntBASIC6.13□□□□□ -1.43
Hmgb3O54879 Gm15579-201ENSMUST00000141299 757 ntTSL 3 BASIC6.13□□□□□ -1.43
Hmgb3O54879 4930527B05Rik-201ENSMUST00000141593 602 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Hmgb3O54879 Gm20452-201ENSMUST00000174686 513 ntBASIC6.13□□□□□ -1.43
Hmgb3O54879 H2-Aa-204ENSMUST00000174751 826 ntTSL 3 BASIC6.13□□□□□ -1.43
Hmgb3O54879 Smarca2-213ENSMUST00000176698 955 ntTSL 5 BASIC6.13□□□□□ -1.43
Hmgb3O54879 Gm26875-201ENSMUST00000181006 950 ntBASIC6.13□□□□□ -1.43
Hmgb3O54879 Gm6556-201ENSMUST00000181118 362 ntTSL 5 BASIC6.13□□□□□ -1.43
Hmgb3O54879 Btg1-ps1-202ENSMUST00000184432 825 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Hmgb3O54879 Gm5696-201ENSMUST00000189850 552 ntBASIC6.13□□□□□ -1.43
Hmgb3O54879 Gm36961-201ENSMUST00000191980 132 ntBASIC6.13□□□□□ -1.43
Hmgb3O54879 Gm7369-201ENSMUST00000192738 936 ntBASIC6.13□□□□□ -1.43
Hmgb3O54879 Gm29808-201ENSMUST00000194419 468 ntBASIC6.13□□□□□ -1.43
Hmgb3O54879 Gm43471-201ENSMUST00000197550 467 ntBASIC6.13□□□□□ -1.43
Hmgb3O54879 Gm42952-204ENSMUST00000198572 408 ntTSL 3 BASIC6.13□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 93.7 ms