Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Tnfaip8l3-201ENSMUST00000098760 4403 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Col6a3E9PWQ3 Asb1-201ENSMUST00000027538 5826 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Col6a3E9PWQ3 Wdr76-204ENSMUST00000110603 2341 ntAPPRIS ALT2 TSL 5 BASIC7.29□□□□□ -1.24
Col6a3E9PWQ3 Msantd4-201ENSMUST00000047173 2731 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Col6a3E9PWQ3 Dync1i2-204ENSMUST00000112138 2466 ntAPPRIS P3 TSL 1 (best) BASIC7.29□□□□□ -1.24
Col6a3E9PWQ3 Six6-201ENSMUST00000021519 4009 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Col6a3E9PWQ3 Cspp1-217ENSMUST00000186294 3429 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
Col6a3E9PWQ3 Tvp23a-201ENSMUST00000051118 3315 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Col6a3E9PWQ3 Lpl-201ENSMUST00000015712 4115 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Col6a3E9PWQ3 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Col6a3E9PWQ3 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Col6a3E9PWQ3 F830045P16Rik-201ENSMUST00000050309 1925 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Col6a3E9PWQ3 4930524O08Rik-202ENSMUST00000184444 2719 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Col6a3E9PWQ3 Cd68-202ENSMUST00000108654 1008 ntAPPRIS ALT2 TSL 5 BASIC7.28□□□□□ -1.24
Col6a3E9PWQ3 Olfr636-ps1-201ENSMUST00000134827 935 ntBASIC7.28□□□□□ -1.24
Col6a3E9PWQ3 Obox3-204ENSMUST00000173912 1244 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
Col6a3E9PWQ3 Gm27024-201ENSMUST00000182561 755 ntBASIC7.28□□□□□ -1.24
Col6a3E9PWQ3 Gm37463-201ENSMUST00000193819 796 ntBASIC7.28□□□□□ -1.24
Col6a3E9PWQ3 Gm37285-201ENSMUST00000194465 1139 ntBASIC7.28□□□□□ -1.24
Col6a3E9PWQ3 Gm43631-201ENSMUST00000202011 369 ntBASIC7.28□□□□□ -1.24
Col6a3E9PWQ3 Gm5110-201ENSMUST00000203122 1063 ntBASIC7.28□□□□□ -1.24
Col6a3E9PWQ3 4930555G07Rik-201ENSMUST00000218226 634 ntTSL 3 BASIC7.28□□□□□ -1.24
Col6a3E9PWQ3 AC154452.1-201ENSMUST00000225819 241 ntBASIC7.28□□□□□ -1.24
Col6a3E9PWQ3 Tcaim-201ENSMUST00000052740 3049 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Col6a3E9PWQ3 Gm3752-201ENSMUST00000164366 1817 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
Col6a3E9PWQ3 5430427N15Rik-201ENSMUST00000200007 2393 ntBASIC7.28□□□□□ -1.24
Col6a3E9PWQ3 Gpr63-201ENSMUST00000038920 2370 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Col6a3E9PWQ3 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC7.28□□□□□ -1.24
Col6a3E9PWQ3 Gm39321-203ENSMUST00000217090 1575 ntTSL 5 BASIC7.28□□□□□ -1.24
Col6a3E9PWQ3 Gm42897-201ENSMUST00000201486 2112 ntBASIC7.28□□□□□ -1.24
Col6a3E9PWQ3 Liph-201ENSMUST00000060673 3793 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Col6a3E9PWQ3 Sorcs1-208ENSMUST00000211687 7080 ntAPPRIS P2 TSL 1 (best) BASIC7.28□□□□□ -1.24
Col6a3E9PWQ3 Exoc1-202ENSMUST00000087133 3371 ntAPPRIS P4 TSL 1 (best) BASIC7.28□□□□□ -1.24
Col6a3E9PWQ3 Cnot2-202ENSMUST00000105265 2268 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Col6a3E9PWQ3 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
Col6a3E9PWQ3 Cd300lg-203ENSMUST00000107164 2737 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
Col6a3E9PWQ3 Nup50-201ENSMUST00000165443 4741 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Col6a3E9PWQ3 Grhl1-201ENSMUST00000020985 3070 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Col6a3E9PWQ3 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC7.28□□□□□ -1.24
Col6a3E9PWQ3 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Col6a3E9PWQ3 Lhx9-201ENSMUST00000019374 4937 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Col6a3E9PWQ3 Sox6-212ENSMUST00000206369 2863 ntAPPRIS ALT2 TSL 5 BASIC7.28□□□□□ -1.24
Col6a3E9PWQ3 4933431K23Rik-204ENSMUST00000209273 2857 ntTSL 5 BASIC7.28□□□□□ -1.24
Col6a3E9PWQ3 Ldah-202ENSMUST00000169104 2626 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Col6a3E9PWQ3 Rnase6-202ENSMUST00000226194 2452 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
Col6a3E9PWQ3 Kcnu1-202ENSMUST00000120653 1446 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Col6a3E9PWQ3 1700026D11Rik-203ENSMUST00000144501 535 ntTSL 3 BASIC7.28□□□□□ -1.24
Col6a3E9PWQ3 Sumo2-207ENSMUST00000153892 1051 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Col6a3E9PWQ3 Rps8-ps1-201ENSMUST00000172445 624 ntBASIC7.28□□□□□ -1.24
Col6a3E9PWQ3 Gm28156-201ENSMUST00000187880 1136 ntTSL 5 BASIC7.28□□□□□ -1.24
Col6a3E9PWQ3 Gm44386-201ENSMUST00000204288 429 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Col6a3E9PWQ3 Ndufa4-204ENSMUST00000204714 452 ntAPPRIS P1 TSL 3 BASIC7.28□□□□□ -1.24
Col6a3E9PWQ3 Gm18996-201ENSMUST00000214851 755 ntBASIC7.28□□□□□ -1.24
Col6a3E9PWQ3 Olfr687-202ENSMUST00000218046 1004 ntTSL 5 BASIC7.28□□□□□ -1.24
Col6a3E9PWQ3 AC164567.4-201ENSMUST00000219708 483 ntBASIC7.28□□□□□ -1.24
Col6a3E9PWQ3 AC110176.1-201ENSMUST00000226219 504 ntBASIC7.28□□□□□ -1.24
Col6a3E9PWQ3 Mmp12-202ENSMUST00000065079 1185 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Col6a3E9PWQ3 Olfr732-201ENSMUST00000071208 1044 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
Col6a3E9PWQ3 Ano1-202ENSMUST00000118556 4566 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
Col6a3E9PWQ3 Gm9049-201ENSMUST00000178998 2409 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
Col6a3E9PWQ3 Gm32717-201ENSMUST00000219147 2409 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
Col6a3E9PWQ3 Gm32802-201ENSMUST00000219565 2409 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
Col6a3E9PWQ3 Gm9045-201ENSMUST00000219760 2409 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
Col6a3E9PWQ3 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC7.28□□□□□ -1.24
Col6a3E9PWQ3 Madd-213ENSMUST00000111376 5927 ntAPPRIS ALT2 TSL 5 BASIC7.28□□□□□ -1.24
Col6a3E9PWQ3 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Col6a3E9PWQ3 Rsrc2-219ENSMUST00000182955 1685 ntTSL 5 BASIC7.28□□□□□ -1.24
Col6a3E9PWQ3 1700074P13Rik-202ENSMUST00000122181 1542 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Col6a3E9PWQ3 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Col6a3E9PWQ3 Gm26831-201ENSMUST00000181458 1380 ntBASIC7.28□□□□□ -1.24
Col6a3E9PWQ3 Unc5c-201ENSMUST00000075282 3890 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Col6a3E9PWQ3 Ulk4-209ENSMUST00000171923 4103 ntAPPRIS P2 TSL 5 BASIC7.28□□□□□ -1.24
Col6a3E9PWQ3 Gm14550-201ENSMUST00000117918 407 ntBASIC7.28□□□□□ -1.24
Col6a3E9PWQ3 Gm12618-201ENSMUST00000121754 483 ntBASIC7.28□□□□□ -1.24
Col6a3E9PWQ3 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC7.28□□□□□ -1.24
Col6a3E9PWQ3 Scml4-202ENSMUST00000105494 4166 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Col6a3E9PWQ3 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Col6a3E9PWQ3 Fgd3-201ENSMUST00000048716 3519 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Col6a3E9PWQ3 Nr1h5-203ENSMUST00000196983 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
Col6a3E9PWQ3 Gm29811-201ENSMUST00000197386 1671 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Col6a3E9PWQ3 Gigyf2-205ENSMUST00000172794 4029 ntAPPRIS ALT2 TSL 5 BASIC7.27□□□□□ -1.24
Col6a3E9PWQ3 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC7.27□□□□□ -1.24
Col6a3E9PWQ3 Fhl1-204ENSMUST00000114772 2283 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.24
Col6a3E9PWQ3 Fhl1-205ENSMUST00000114773 2298 ntTSL 5 BASIC7.27□□□□□ -1.24
Col6a3E9PWQ3 Olfr181-201ENSMUST00000075361 1391 ntAPPRIS P1 TSL 2 BASIC7.27□□□□□ -1.24
Col6a3E9PWQ3 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Col6a3E9PWQ3 Gm42820-201ENSMUST00000200084 3063 ntBASIC7.27□□□□□ -1.25
Col6a3E9PWQ3 Cyp2c29-201ENSMUST00000003137 1783 ntAPPRIS P2 TSL 1 (best) BASIC7.27□□□□□ -1.25
Col6a3E9PWQ3 Gm37496-201ENSMUST00000191930 2509 ntBASIC7.27□□□□□ -1.25
Col6a3E9PWQ3 Prepl-201ENSMUST00000072406 3294 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Col6a3E9PWQ3 Gm11804-201ENSMUST00000121663 468 ntBASIC7.27□□□□□ -1.25
Col6a3E9PWQ3 Gm12650-201ENSMUST00000121966 258 ntBASIC7.27□□□□□ -1.25
Col6a3E9PWQ3 Gm11335-201ENSMUST00000148743 1080 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Col6a3E9PWQ3 Gm12963-203ENSMUST00000156271 388 ntTSL 5 BASIC7.27□□□□□ -1.25
Col6a3E9PWQ3 Obox3-ps3-201ENSMUST00000177242 1004 ntBASIC7.27□□□□□ -1.25
Col6a3E9PWQ3 Gm29596-201ENSMUST00000185710 385 ntBASIC7.27□□□□□ -1.25
Col6a3E9PWQ3 A830029E22Rik-201ENSMUST00000193672 1194 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Col6a3E9PWQ3 Atp6v0a1-202ENSMUST00000092663 3813 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Col6a3E9PWQ3 Gm3510-201ENSMUST00000180447 1455 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Col6a3E9PWQ3 Ldlr-201ENSMUST00000034713 4627 ntAPPRIS P2 TSL 1 (best) BASIC7.27□□□□□ -1.25
Retrieved 100 of 76,532 protein–RNA pairs in 67.2 ms