Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Gm45399-201ENSMUST00000209955 1016 ntBASIC7.31□□□□□ -1.24
Upk3aQ9JKX8 Tmem156-206ENSMUST00000212640 1271 ntTSL 5 BASIC7.31□□□□□ -1.24
Upk3aQ9JKX8 Olfr97-204ENSMUST00000214622 1573 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
Upk3aQ9JKX8 AC164424.3-201ENSMUST00000220809 148 ntBASIC7.31□□□□□ -1.24
Upk3aQ9JKX8 4930477G07Rik-202ENSMUST00000223195 947 ntTSL 5 BASIC7.31□□□□□ -1.24
Upk3aQ9JKX8 AC166358.8-201ENSMUST00000223288 105 ntBASIC7.31□□□□□ -1.24
Upk3aQ9JKX8 AC124739.1-201ENSMUST00000223433 148 ntBASIC7.31□□□□□ -1.24
Upk3aQ9JKX8 AC163038.4-201ENSMUST00000224942 474 ntBASIC7.31□□□□□ -1.24
Upk3aQ9JKX8 9430069I07Rik-202ENSMUST00000227772 572 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
Upk3aQ9JKX8 Clec4n-201ENSMUST00000024118 1229 ntAPPRIS P3 TSL 1 (best) BASIC7.31□□□□□ -1.24
Upk3aQ9JKX8 Slc17a6-201ENSMUST00000032710 4137 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Upk3aQ9JKX8 Olfr680-ps1-201ENSMUST00000042676 936 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
Upk3aQ9JKX8 Gm5250-201ENSMUST00000059065 321 ntBASIC7.31□□□□□ -1.24
Upk3aQ9JKX8 4921504E06Rik-201ENSMUST00000062060 2008 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Upk3aQ9JKX8 Tnfaip6-201ENSMUST00000065927 1710 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Upk3aQ9JKX8 Olfr97-201ENSMUST00000073667 1555 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
Upk3aQ9JKX8 Gm15401-201ENSMUST00000081929 1107 ntTSL 5 BASIC7.31□□□□□ -1.24
Upk3aQ9JKX8 Gm25926-201ENSMUST00000082899 160 ntBASIC7.31□□□□□ -1.24
Upk3aQ9JKX8 Ermard-204ENSMUST00000097395 1593 ntAPPRIS ALT2 TSL 5 BASIC7.31□□□□□ -1.24
Upk3aQ9JKX8 Gm7682-201ENSMUST00000098289 1443 ntAPPRIS ALT2 TSL 5 BASIC7.31□□□□□ -1.24
Upk3aQ9JKX8 Tenm4-202ENSMUST00000107165 10930 ntAPPRIS P4 TSL 1 (best) BASIC7.31□□□□□ -1.24
Upk3aQ9JKX8 Cep290-210ENSMUST00000220346 8211 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
Upk3aQ9JKX8 Ctnna2-202ENSMUST00000159626 3908 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Upk3aQ9JKX8 Gm45807-201ENSMUST00000209142 2874 ntBASIC7.31□□□□□ -1.24
Upk3aQ9JKX8 AC159635.1-201ENSMUST00000220905 2102 ntBASIC7.31□□□□□ -1.24
Upk3aQ9JKX8 Cep135-201ENSMUST00000049060 5313 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Upk3aQ9JKX8 Gm2244-201ENSMUST00000164372 1506 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Upk3aQ9JKX8 Efl1-206ENSMUST00000207868 1537 ntTSL 3 BASIC7.31□□□□□ -1.24
Upk3aQ9JKX8 Polr2b-201ENSMUST00000031167 4145 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Upk3aQ9JKX8 Trps1-206ENSMUST00000184458 5293 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
Upk3aQ9JKX8 Lemd1-205ENSMUST00000188169 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
Upk3aQ9JKX8 Usp54-201ENSMUST00000022356 6580 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
Upk3aQ9JKX8 Phlpp2-203ENSMUST00000179721 7846 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Upk3aQ9JKX8 Lipt1-201ENSMUST00000041621 1485 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Upk3aQ9JKX8 Ftx-203ENSMUST00000130063 4275 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Upk3aQ9JKX8 Ctnnd1-208ENSMUST00000111677 5789 ntTSL 5 BASIC7.3□□□□□ -1.24
Upk3aQ9JKX8 Ralgapa1-212ENSMUST00000226244 8841 ntBASIC7.3□□□□□ -1.24
Upk3aQ9JKX8 Vwde-202ENSMUST00000203074 5626 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
Upk3aQ9JKX8 Samd3-206ENSMUST00000220219 1744 ntAPPRIS P4 TSL 5 BASIC7.3□□□□□ -1.24
Upk3aQ9JKX8 Gli3-201ENSMUST00000110510 8170 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Upk3aQ9JKX8 2610028E06Rik-205ENSMUST00000156350 3623 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Upk3aQ9JKX8 Ppargc1a-205ENSMUST00000196968 2754 ntTSL 5 BASIC7.3□□□□□ -1.24
Upk3aQ9JKX8 Zc4h2-201ENSMUST00000044382 2219 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Upk3aQ9JKX8 Gm22439-201ENSMUST00000104048 132 ntBASIC7.3□□□□□ -1.24
Upk3aQ9JKX8 Gm23484-201ENSMUST00000104178 131 ntBASIC7.3□□□□□ -1.24
Upk3aQ9JKX8 Cldn16-201ENSMUST00000115302 950 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Upk3aQ9JKX8 Gm12593-201ENSMUST00000120981 743 ntBASIC7.3□□□□□ -1.24
Upk3aQ9JKX8 Gm11688-201ENSMUST00000122145 308 ntBASIC7.3□□□□□ -1.24
Upk3aQ9JKX8 Prkag2os1-201ENSMUST00000134633 991 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Upk3aQ9JKX8 Zfp652os-201ENSMUST00000155531 537 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Upk3aQ9JKX8 Gm25692-201ENSMUST00000175444 125 ntBASIC7.3□□□□□ -1.24
Upk3aQ9JKX8 Gm3149-203ENSMUST00000179649 618 ntAPPRIS ALT2 TSL 2 BASIC7.3□□□□□ -1.24
Upk3aQ9JKX8 Mir6940-201ENSMUST00000183447 70 ntBASIC7.3□□□□□ -1.24
Upk3aQ9JKX8 Gm20111-201ENSMUST00000184830 319 ntBASIC7.3□□□□□ -1.24
Upk3aQ9JKX8 Mir6403-201ENSMUST00000185007 129 ntBASIC7.3□□□□□ -1.24
Upk3aQ9JKX8 Gm20813-201ENSMUST00000186646 705 ntBASIC7.3□□□□□ -1.24
Upk3aQ9JKX8 Gm28512-201ENSMUST00000187415 762 ntTSL 3 BASIC7.3□□□□□ -1.24
Upk3aQ9JKX8 Gm21923-201ENSMUST00000188455 696 ntBASIC7.3□□□□□ -1.24
Upk3aQ9JKX8 Gm28164-201ENSMUST00000190143 442 ntBASIC7.3□□□□□ -1.24
Upk3aQ9JKX8 Gm3476-203ENSMUST00000190582 612 ntTSL 5 BASIC7.3□□□□□ -1.24
Upk3aQ9JKX8 Rnf212-202ENSMUST00000196652 853 ntTSL 2 BASIC7.3□□□□□ -1.24
Upk3aQ9JKX8 4930563H07Rik-201ENSMUST00000203494 628 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Upk3aQ9JKX8 Reg1-202ENSMUST00000204601 766 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
Upk3aQ9JKX8 Reg1-203ENSMUST00000204687 904 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
Upk3aQ9JKX8 Gm45446-201ENSMUST00000209348 216 ntBASIC7.3□□□□□ -1.24
Upk3aQ9JKX8 Gm45370-201ENSMUST00000211274 483 ntTSL 5 BASIC7.3□□□□□ -1.24
Upk3aQ9JKX8 AC160060.2-201ENSMUST00000220151 811 ntTSL 5 BASIC7.3□□□□□ -1.24
Upk3aQ9JKX8 7420701I03Rik-201ENSMUST00000222157 737 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Upk3aQ9JKX8 AL844586.1-201ENSMUST00000224297 1042 ntBASIC7.3□□□□□ -1.24
Upk3aQ9JKX8 AC139569.1-201ENSMUST00000226080 614 ntBASIC7.3□□□□□ -1.24
Upk3aQ9JKX8 FAM237A-201ENSMUST00000226288 1105 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
Upk3aQ9JKX8 Olfr905-201ENSMUST00000051111 937 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
Upk3aQ9JKX8 Rhox11-201ENSMUST00000054147 811 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Upk3aQ9JKX8 Commd3-201ENSMUST00000061158 935 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Upk3aQ9JKX8 Olfr224-201ENSMUST00000081102 945 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
Upk3aQ9JKX8 Dab2-204ENSMUST00000110664 4450 ntAPPRIS ALT2 TSL 5 BASIC7.3□□□□□ -1.24
Upk3aQ9JKX8 Mpdz-203ENSMUST00000107262 7518 ntAPPRIS ALT2 TSL 5 BASIC7.3□□□□□ -1.24
Upk3aQ9JKX8 Plb1-205ENSMUST00000202201 3539 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Upk3aQ9JKX8 Prpf18-201ENSMUST00000035721 3522 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Upk3aQ9JKX8 Gprasp1-206ENSMUST00000166554 4993 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Upk3aQ9JKX8 Olfr460-202ENSMUST00000216942 3370 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
Upk3aQ9JKX8 Mef2c-222ENSMUST00000199019 4441 ntTSL 5 BASIC7.3□□□□□ -1.24
Upk3aQ9JKX8 Rufy3-201ENSMUST00000031229 4049 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Upk3aQ9JKX8 Carf-206ENSMUST00000180952 2157 ntAPPRIS P3 TSL 1 (best) BASIC7.3□□□□□ -1.24
Upk3aQ9JKX8 Gm42969-201ENSMUST00000199858 3631 ntBASIC7.3□□□□□ -1.24
Upk3aQ9JKX8 CT571245.1-201ENSMUST00000218642 3465 ntBASIC7.3□□□□□ -1.24
Upk3aQ9JKX8 Hsd11b1-201ENSMUST00000016338 1623 ntAPPRIS P2 TSL 1 (best) BASIC7.3□□□□□ -1.24
Upk3aQ9JKX8 Gm37022-201ENSMUST00000192517 2254 ntBASIC7.3□□□□□ -1.24
Upk3aQ9JKX8 Ccdc80-202ENSMUST00000099498 3671 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Upk3aQ9JKX8 Dnmbp-203ENSMUST00000212048 4186 ntTSL 5 BASIC7.3□□□□□ -1.24
Upk3aQ9JKX8 Gm7086-201ENSMUST00000219083 1482 ntTSL 5 BASIC7.3□□□□□ -1.24
Upk3aQ9JKX8 6720489N17Rik-203ENSMUST00000223338 1457 ntAPPRIS ALT2 TSL 5 BASIC7.3□□□□□ -1.24
Upk3aQ9JKX8 Ttll4-202ENSMUST00000113678 3762 ntTSL 5 BASIC7.3□□□□□ -1.24
Upk3aQ9JKX8 Pdgfd-201ENSMUST00000058692 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
Upk3aQ9JKX8 AC158605.4-201ENSMUST00000219013 3361 ntBASIC7.29□□□□□ -1.24
Upk3aQ9JKX8 Sbf2-201ENSMUST00000033058 7154 ntAPPRIS P2 TSL 5 BASIC7.29□□□□□ -1.24
Upk3aQ9JKX8 Gm42771-201ENSMUST00000198342 2486 ntBASIC7.29□□□□□ -1.24
Upk3aQ9JKX8 Gm10424-202ENSMUST00000201031 1848 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
Upk3aQ9JKX8 Mmp3-201ENSMUST00000034497 1801 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Upk3aQ9JKX8 Onecut2-201ENSMUST00000115145 13389 ntAPPRIS P2 TSL 1 (best) BASIC7.29□□□□□ -1.24
Retrieved 100 of 76,532 protein–RNA pairs in 115.1 ms