Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Gm44684-201ENSMUST00000205388 2926 ntTSL 5 BASIC7.36□□□□□ -1.23
Clrn1Q8K445 5430403N17Rik-201ENSMUST00000210717 2553 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Clrn1Q8K445 Ptch1-202ENSMUST00000192155 7002 ntAPPRIS ALT2 TSL 5 BASIC7.36□□□□□ -1.23
Clrn1Q8K445 Gm28979-201ENSMUST00000190949 1540 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Clrn1Q8K445 Lpp-201ENSMUST00000038053 15647 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Clrn1Q8K445 Pafah2-202ENSMUST00000105870 3180 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Clrn1Q8K445 Meis1-201ENSMUST00000068264 3196 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Clrn1Q8K445 Cd247-208ENSMUST00000178336 2807 ntTSL 5 BASIC7.36□□□□□ -1.23
Clrn1Q8K445 Mgam-202ENSMUST00000201148 6488 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Clrn1Q8K445 Mgam-201ENSMUST00000071535 6488 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Clrn1Q8K445 Glra4-201ENSMUST00000018739 1831 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Clrn1Q8K445 1700123J17Rik-201ENSMUST00000206035 1805 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Clrn1Q8K445 Tgm3-201ENSMUST00000110299 4135 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Clrn1Q8K445 2810039B14Rik-204ENSMUST00000184801 2796 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Clrn1Q8K445 Mov10l1-201ENSMUST00000015509 4052 ntAPPRIS P2 TSL 5 BASIC7.36□□□□□ -1.23
Clrn1Q8K445 Nr5a2-201ENSMUST00000027649 4733 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Clrn1Q8K445 Ipcef1-203ENSMUST00000105617 6041 ntAPPRIS P3 TSL 5 BASIC7.36□□□□□ -1.23
Clrn1Q8K445 1500026H17Rik-201ENSMUST00000181598 3027 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Clrn1Q8K445 9430098F02Rik-201ENSMUST00000180832 2986 ntTSL 5 BASIC7.35□□□□□ -1.23
Clrn1Q8K445 Slc3a1-201ENSMUST00000024944 2307 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Clrn1Q8K445 B3gnt2-201ENSMUST00000055549 2602 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Clrn1Q8K445 D630045J12Rik-201ENSMUST00000117556 10916 ntAPPRIS ALT2 TSL 5 BASIC7.35□□□□□ -1.23
Clrn1Q8K445 A330008L17Rik-201ENSMUST00000064349 3220 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Clrn1Q8K445 Ccdc60-201ENSMUST00000050178 3522 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Clrn1Q8K445 Trim12a-202ENSMUST00000106837 1389 ntAPPRIS ALT2 TSL 5 BASIC7.35□□□□□ -1.23
Clrn1Q8K445 Tspan8-203ENSMUST00000179196 1381 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Clrn1Q8K445 Gm4863-201ENSMUST00000196907 1381 ntBASIC7.35□□□□□ -1.23
Clrn1Q8K445 Icosl-201ENSMUST00000105393 2814 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Clrn1Q8K445 Fam216b-201ENSMUST00000066437 2241 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Clrn1Q8K445 Glmp-209ENSMUST00000177005 4219 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Clrn1Q8K445 9930111J21Rik1-202ENSMUST00000097494 3863 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
Clrn1Q8K445 Spata1-202ENSMUST00000093951 2712 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Clrn1Q8K445 Gm26734-201ENSMUST00000181769 1594 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Clrn1Q8K445 Them7-201ENSMUST00000068813 1556 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Clrn1Q8K445 Kif24-202ENSMUST00000108055 5593 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Clrn1Q8K445 AC107740.1-201ENSMUST00000216972 2401 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Clrn1Q8K445 Gm26469-201ENSMUST00000116765 121 ntBASIC7.35□□□□□ -1.23
Clrn1Q8K445 Gm14032-201ENSMUST00000117686 1026 ntBASIC7.35□□□□□ -1.23
Clrn1Q8K445 Olfr1374-ps1-201ENSMUST00000120114 936 ntBASIC7.35□□□□□ -1.23
Clrn1Q8K445 Gm13658-201ENSMUST00000135329 929 ntTSL 5 BASIC7.35□□□□□ -1.23
Clrn1Q8K445 Gm11186-201ENSMUST00000137096 1179 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Clrn1Q8K445 Gm13499-201ENSMUST00000142804 603 ntTSL 3 BASIC7.35□□□□□ -1.23
Clrn1Q8K445 Gm14642-201ENSMUST00000147357 470 ntTSL 3 BASIC7.35□□□□□ -1.23
Clrn1Q8K445 Gm14167-201ENSMUST00000148705 433 ntTSL 3 BASIC7.35□□□□□ -1.23
Clrn1Q8K445 Ifrd1-204ENSMUST00000165027 1293 ntTSL 5 BASIC7.35□□□□□ -1.23
Clrn1Q8K445 Trav9d-2-201ENSMUST00000178824 337 ntAPPRIS ALT2 BASIC7.35□□□□□ -1.23
Clrn1Q8K445 Vmn1r227-202ENSMUST00000179914 1026 ntBASIC7.35□□□□□ -1.23
Clrn1Q8K445 Trav9n-2-201ENSMUST00000180097 337 ntAPPRIS ALT2 BASIC7.35□□□□□ -1.23
Clrn1Q8K445 Gm9149-201ENSMUST00000182724 1007 ntBASIC7.35□□□□□ -1.23
Clrn1Q8K445 Mir6415-201ENSMUST00000184064 100 ntBASIC7.35□□□□□ -1.23
Clrn1Q8K445 Gm17867-201ENSMUST00000188981 391 ntBASIC7.35□□□□□ -1.23
Clrn1Q8K445 Gm29175-201ENSMUST00000189500 402 ntBASIC7.35□□□□□ -1.23
Clrn1Q8K445 Gm37768-201ENSMUST00000192748 887 ntTSL 3 BASIC7.35□□□□□ -1.23
Clrn1Q8K445 Gm37825-201ENSMUST00000193141 904 ntTSL 5 BASIC7.35□□□□□ -1.23
Clrn1Q8K445 Gm38268-201ENSMUST00000195813 193 ntBASIC7.35□□□□□ -1.23
Clrn1Q8K445 Gm43287-201ENSMUST00000197747 600 ntBASIC7.35□□□□□ -1.23
Clrn1Q8K445 Gm45299-201ENSMUST00000210199 420 ntBASIC7.35□□□□□ -1.23
Clrn1Q8K445 Olfr838-ps1-201ENSMUST00000211872 977 ntBASIC7.35□□□□□ -1.23
Clrn1Q8K445 Gm33103-201ENSMUST00000212717 527 ntTSL 3 BASIC7.35□□□□□ -1.23
Clrn1Q8K445 Gm35501-201ENSMUST00000213492 783 ntTSL 2 BASIC7.35□□□□□ -1.23
Clrn1Q8K445 Gm18242-201ENSMUST00000218455 542 ntBASIC7.35□□□□□ -1.23
Clrn1Q8K445 AC144783.1-201ENSMUST00000219103 960 ntBASIC7.35□□□□□ -1.23
Clrn1Q8K445 AC124715.2-201ENSMUST00000226762 617 ntBASIC7.35□□□□□ -1.23
Clrn1Q8K445 Spink10-201ENSMUST00000055725 1113 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Clrn1Q8K445 Apoa2-201ENSMUST00000005824 492 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Clrn1Q8K445 4930563M21Rik-201ENSMUST00000060468 792 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Clrn1Q8K445 Olfr1260-201ENSMUST00000061830 933 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
Clrn1Q8K445 Prdm10-205ENSMUST00000215847 3519 ntAPPRIS ALT2 TSL 5 BASIC7.35□□□□□ -1.23
Clrn1Q8K445 Mbnl2-201ENSMUST00000088419 4552 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Clrn1Q8K445 Klrb1c-201ENSMUST00000167691 2623 ntAPPRIS P3 TSL 1 (best) BASIC7.35□□□□□ -1.23
Clrn1Q8K445 Crb1-204ENSMUST00000198445 6135 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
Clrn1Q8K445 Vcan-206ENSMUST00000159910 8332 ntTSL 5 BASIC7.35□□□□□ -1.23
Clrn1Q8K445 Gm45194-202ENSMUST00000207962 1991 ntAPPRIS P5 TSL 5 BASIC7.35□□□□□ -1.23
Clrn1Q8K445 Ehhadh-201ENSMUST00000023559 3018 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Clrn1Q8K445 Pcnx4-201ENSMUST00000044352 4300 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Clrn1Q8K445 2010310C07Rik-201ENSMUST00000187172 2226 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Clrn1Q8K445 Vmn1r50-203ENSMUST00000226577 2240 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
Clrn1Q8K445 Gm37200-201ENSMUST00000193689 2172 ntBASIC7.35□□□□□ -1.23
Clrn1Q8K445 Olfr1241-203ENSMUST00000215055 2441 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
Clrn1Q8K445 Haus2-203ENSMUST00000124187 3154 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Clrn1Q8K445 Pknox2-202ENSMUST00000080754 3431 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Clrn1Q8K445 AW146154-201ENSMUST00000098509 3411 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Clrn1Q8K445 Lnpep-201ENSMUST00000041047 5181 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Clrn1Q8K445 Pbdc1-201ENSMUST00000033577 2638 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Clrn1Q8K445 Usp40-201ENSMUST00000040783 5049 ntAPPRIS P3 TSL 1 (best) BASIC7.34□□□□□ -1.23
Clrn1Q8K445 Antxrl-201ENSMUST00000058725 2532 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Clrn1Q8K445 Mrpl35-201ENSMUST00000065103 3721 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Clrn1Q8K445 Grik2-205ENSMUST00000218598 3245 ntTSL 5 BASIC7.34□□□□□ -1.23
Clrn1Q8K445 Slc16a14-201ENSMUST00000027422 3207 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Clrn1Q8K445 Ssr3-201ENSMUST00000029414 2957 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Clrn1Q8K445 Pecam1-201ENSMUST00000068021 2977 ntAPPRIS ALT2 TSL 2 BASIC7.34□□□□□ -1.23
Clrn1Q8K445 Gm8428-201ENSMUST00000159919 1784 ntBASIC7.34□□□□□ -1.23
Clrn1Q8K445 Gm36380-201ENSMUST00000210339 4379 ntTSL 5 BASIC7.34□□□□□ -1.23
Clrn1Q8K445 Ptk2b-208ENSMUST00000178730 3863 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Clrn1Q8K445 Trim40-203ENSMUST00000172711 1539 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.23
Clrn1Q8K445 Fkbp14-201ENSMUST00000046520 2694 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Clrn1Q8K445 Naip1-202ENSMUST00000221727 1968 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Clrn1Q8K445 Cyp2c55-201ENSMUST00000025966 1995 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Clrn1Q8K445 Gm11443-201ENSMUST00000118790 479 ntBASIC7.34□□□□□ -1.23
Clrn1Q8K445 Gm12611-201ENSMUST00000119452 1037 ntBASIC7.34□□□□□ -1.23
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms