Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Gm11585-201ENSMUST00000120901 569 ntBASIC8.98□□□□□ -0.97
Vps53Q8CCB4 A930104D05Rik-201ENSMUST00000128601 939 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Vps53Q8CCB4 Gm13538-201ENSMUST00000143166 548 ntTSL 3 BASIC8.98□□□□□ -0.97
Vps53Q8CCB4 Mllt3-208ENSMUST00000149357 794 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Vps53Q8CCB4 Dctd-205ENSMUST00000174278 799 ntAPPRIS P1 TSL 3 BASIC8.98□□□□□ -0.97
Vps53Q8CCB4 Gm10182-201ENSMUST00000178676 273 ntBASIC8.98□□□□□ -0.97
Vps53Q8CCB4 1700030F04Rik-202ENSMUST00000188781 617 ntTSL 5 BASIC8.98□□□□□ -0.97
Vps53Q8CCB4 Gm28239-201ENSMUST00000190225 447 ntBASIC8.98□□□□□ -0.97
Vps53Q8CCB4 Gm4785-201ENSMUST00000191025 751 ntBASIC8.98□□□□□ -0.97
Vps53Q8CCB4 Gm28548-201ENSMUST00000191599 409 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Vps53Q8CCB4 Gm42464-201ENSMUST00000196717 417 ntBASIC8.98□□□□□ -0.97
Vps53Q8CCB4 Gm44979-201ENSMUST00000206218 287 ntBASIC8.98□□□□□ -0.97
Vps53Q8CCB4 Gm34418-201ENSMUST00000212879 309 ntTSL 5 BASIC8.98□□□□□ -0.97
Vps53Q8CCB4 AC166052.1-201ENSMUST00000217028 397 ntTSL 2 BASIC8.98□□□□□ -0.97
Vps53Q8CCB4 Gm7392-201ENSMUST00000217815 345 ntBASIC8.98□□□□□ -0.97
Vps53Q8CCB4 Gm35638-201ENSMUST00000220724 652 ntBASIC8.98□□□□□ -0.97
Vps53Q8CCB4 AC163041.1-201ENSMUST00000221984 133 ntBASIC8.98□□□□□ -0.97
Vps53Q8CCB4 AC241621.1-201ENSMUST00000224499 430 ntBASIC8.98□□□□□ -0.97
Vps53Q8CCB4 CT009733.1-202ENSMUST00000224941 441 ntBASIC8.98□□□□□ -0.97
Vps53Q8CCB4 AC154595.1-201ENSMUST00000225533 1059 ntBASIC8.98□□□□□ -0.97
Vps53Q8CCB4 Tdgf1-ps2-201ENSMUST00000074412 505 ntBASIC8.98□□□□□ -0.97
Vps53Q8CCB4 Olfr1504-201ENSMUST00000078282 1085 ntAPPRIS P1 BASIC8.98□□□□□ -0.97
Vps53Q8CCB4 Olfr742-201ENSMUST00000089836 1120 ntAPPRIS P1 BASIC8.98□□□□□ -0.97
Vps53Q8CCB4 Mir146b-201ENSMUST00000093619 109 ntBASIC8.98□□□□□ -0.97
Vps53Q8CCB4 Olfr45-202ENSMUST00000214637 6157 ntAPPRIS P1 TSL 3 BASIC8.98□□□□□ -0.97
Vps53Q8CCB4 1700029M20Rik-203ENSMUST00000153347 2963 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Vps53Q8CCB4 Nipsnap3a-202ENSMUST00000107666 1553 ntAPPRIS ALT2 TSL 5 BASIC8.98□□□□□ -0.97
Vps53Q8CCB4 Tbp-211ENSMUST00000162505 12794 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Vps53Q8CCB4 Krt39-202ENSMUST00000107445 1633 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
Vps53Q8CCB4 AC154347.1-201ENSMUST00000221358 3105 ntBASIC8.98□□□□□ -0.97
Vps53Q8CCB4 Hps5-203ENSMUST00000107654 4422 ntAPPRIS P3 TSL 5 BASIC8.98□□□□□ -0.97
Vps53Q8CCB4 Gm38099-201ENSMUST00000193280 3170 ntBASIC8.98□□□□□ -0.97
Vps53Q8CCB4 Gfpt1-204ENSMUST00000113658 6238 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Vps53Q8CCB4 Sfmbt2-205ENSMUST00000116594 7821 ntAPPRIS P3 TSL 1 (best) BASIC8.97□□□□□ -0.97
Vps53Q8CCB4 5530400K19Rik-201ENSMUST00000193511 1916 ntBASIC8.97□□□□□ -0.97
Vps53Q8CCB4 AI429214-201ENSMUST00000098825 1930 ntAPPRIS P1 BASIC8.97□□□□□ -0.97
Vps53Q8CCB4 Xlr5b-202ENSMUST00000114518 1652 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Vps53Q8CCB4 Xlr5a-204ENSMUST00000179600 1650 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
Vps53Q8CCB4 Xlr5a-201ENSMUST00000078574 1650 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Vps53Q8CCB4 Gm8127-201ENSMUST00000163655 1427 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
Vps53Q8CCB4 Cmah-209ENSMUST00000224953 2221 ntAPPRIS P1 BASIC8.97□□□□□ -0.97
Vps53Q8CCB4 Pdlim5-203ENSMUST00000090134 1722 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Vps53Q8CCB4 Inpp5d-208ENSMUST00000167032 4125 ntTSL 2 BASIC8.97□□□□□ -0.97
Vps53Q8CCB4 Ccdc39-201ENSMUST00000029222 3606 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Vps53Q8CCB4 Cep295-203ENSMUST00000098979 7188 ntAPPRIS P2 TSL 5 BASIC8.97□□□□□ -0.97
Vps53Q8CCB4 Gm29681-201ENSMUST00000198696 4233 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Vps53Q8CCB4 Rgr-201ENSMUST00000022338 4240 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Vps53Q8CCB4 Clasp1-210ENSMUST00000188710 10265 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
Vps53Q8CCB4 Nudt7-202ENSMUST00000073521 3543 ntAPPRIS P3 TSL 1 (best) BASIC8.97□□□□□ -0.97
Vps53Q8CCB4 Ifna14-201ENSMUST00000102808 570 ntAPPRIS P1 BASIC8.97□□□□□ -0.97
Vps53Q8CCB4 Gm24472-201ENSMUST00000104484 132 ntBASIC8.97□□□□□ -0.97
Vps53Q8CCB4 Fau-ps2-201ENSMUST00000119333 371 ntBASIC8.97□□□□□ -0.97
Vps53Q8CCB4 Gm13921-201ENSMUST00000119411 463 ntBASIC8.97□□□□□ -0.97
Vps53Q8CCB4 Gm11955-201ENSMUST00000119801 470 ntBASIC8.97□□□□□ -0.97
Vps53Q8CCB4 Gm14528-201ENSMUST00000120615 231 ntBASIC8.97□□□□□ -0.97
Vps53Q8CCB4 Gm13586-201ENSMUST00000121784 464 ntBASIC8.97□□□□□ -0.97
Vps53Q8CCB4 Rpl29-203ENSMUST00000150576 733 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Vps53Q8CCB4 Gm25437-201ENSMUST00000158282 132 ntBASIC8.97□□□□□ -0.97
Vps53Q8CCB4 Gm4781-201ENSMUST00000167995 781 ntBASIC8.97□□□□□ -0.97
Vps53Q8CCB4 Gm20500-201ENSMUST00000174621 321 ntTSL 3 BASIC8.97□□□□□ -0.97
Vps53Q8CCB4 Gm8529-201ENSMUST00000183298 745 ntBASIC8.97□□□□□ -0.97
Vps53Q8CCB4 Gm28980-201ENSMUST00000187877 219 ntBASIC8.97□□□□□ -0.97
Vps53Q8CCB4 Gm7804-201ENSMUST00000192784 738 ntTSL 5 BASIC8.97□□□□□ -0.97
Vps53Q8CCB4 Gm37336-201ENSMUST00000192794 760 ntTSL 2 BASIC8.97□□□□□ -0.97
Vps53Q8CCB4 C920008G01Rik-201ENSMUST00000196756 380 ntAPPRIS P1 BASIC8.97□□□□□ -0.97
Vps53Q8CCB4 Gm43840-201ENSMUST00000199444 484 ntBASIC8.97□□□□□ -0.97
Vps53Q8CCB4 4933439J24Rik-201ENSMUST00000200866 853 ntBASIC8.97□□□□□ -0.97
Vps53Q8CCB4 Gm44743-201ENSMUST00000209062 386 ntBASIC8.97□□□□□ -0.97
Vps53Q8CCB4 Gm32486-201ENSMUST00000209810 3816 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Vps53Q8CCB4 Gm35521-201ENSMUST00000211285 440 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Vps53Q8CCB4 Tmem156-206ENSMUST00000212640 1271 ntTSL 5 BASIC8.97□□□□□ -0.97
Vps53Q8CCB4 AC160338.3-201ENSMUST00000214836 384 ntBASIC8.97□□□□□ -0.97
Vps53Q8CCB4 Gm33782-201ENSMUST00000218518 517 ntTSL 3 BASIC8.97□□□□□ -0.97
Vps53Q8CCB4 AC159205.1-201ENSMUST00000225513 1099 ntBASIC8.97□□□□□ -0.97
Vps53Q8CCB4 Commd3-201ENSMUST00000061158 935 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Vps53Q8CCB4 Krtap8-1-201ENSMUST00000072280 579 ntAPPRIS P1 BASIC8.97□□□□□ -0.97
Vps53Q8CCB4 Rpl27a-ps1-201ENSMUST00000075382 448 ntBASIC8.97□□□□□ -0.97
Vps53Q8CCB4 Gm34184-201ENSMUST00000216477 2713 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Vps53Q8CCB4 Zfp157-201ENSMUST00000085856 5312 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Vps53Q8CCB4 Mettl15-201ENSMUST00000081631 1894 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Vps53Q8CCB4 Eftud2-201ENSMUST00000021306 3324 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
Vps53Q8CCB4 Sept14-203ENSMUST00000182386 1642 ntAPPRIS P2 TSL 5 BASIC8.97□□□□□ -0.97
Vps53Q8CCB4 Musk-203ENSMUST00000098057 3422 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Vps53Q8CCB4 Gm37499-201ENSMUST00000194683 3478 ntBASIC8.97□□□□□ -0.97
Vps53Q8CCB4 Usp50-201ENSMUST00000028842 1361 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Vps53Q8CCB4 A630001G21Rik-201ENSMUST00000064788 1353 ntAPPRIS P1 TSL 2 BASIC8.97□□□□□ -0.97
Vps53Q8CCB4 Csde1-211ENSMUST00000198180 3849 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Vps53Q8CCB4 Gm45534-201ENSMUST00000211449 2339 ntBASIC8.97□□□□□ -0.97
Vps53Q8CCB4 Gm38070-201ENSMUST00000191850 6480 ntBASIC8.97□□□□□ -0.97
Vps53Q8CCB4 Ociad1-203ENSMUST00000166823 3354 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
Vps53Q8CCB4 Olfr1272-202ENSMUST00000117141 2442 ntAPPRIS P1 TSL 5 BASIC8.96□□□□□ -0.97
Vps53Q8CCB4 Smarcal1-201ENSMUST00000047615 3059 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Vps53Q8CCB4 Osbpl6-202ENSMUST00000111929 8257 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Vps53Q8CCB4 Slc13a1-201ENSMUST00000031713 2495 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Vps53Q8CCB4 Olfr859-202ENSMUST00000212540 9532 ntAPPRIS P1 TSL 3 BASIC8.96□□□□□ -0.97
Vps53Q8CCB4 Gm31152-201ENSMUST00000210319 2171 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
Vps53Q8CCB4 Smpd4-204ENSMUST00000163476 4532 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
Vps53Q8CCB4 Gm9268-201ENSMUST00000166914 2586 ntAPPRIS ALT2 TSL 5 BASIC8.96□□□□□ -0.97
Vps53Q8CCB4 Vmn2r62-201ENSMUST00000169130 2580 ntAPPRIS P1 TSL 5 BASIC8.96□□□□□ -0.97
Vps53Q8CCB4 Gm9268-202ENSMUST00000173815 2565 ntAPPRIS P2 TSL 5 BASIC8.96□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 61.2 ms