Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Gm45370-201ENSMUST00000211274 483 ntTSL 5 BASIC6.32□□□□□ -1.4
Col8a2P25318 Olfr209-204ENSMUST00000213779 564 ntTSL 5 BASIC6.32□□□□□ -1.4
Col8a2P25318 Gm40552-201ENSMUST00000218233 1258 ntTSL 5 BASIC6.32□□□□□ -1.4
Col8a2P25318 AC123920.1-201ENSMUST00000221449 384 ntBASIC6.32□□□□□ -1.4
Col8a2P25318 AC139323.1-201ENSMUST00000223370 1040 ntBASIC6.32□□□□□ -1.4
Col8a2P25318 CT010480.3-201ENSMUST00000224712 259 ntBASIC6.32□□□□□ -1.4
Col8a2P25318 AC154461.4-201ENSMUST00000224878 468 ntBASIC6.32□□□□□ -1.4
Col8a2P25318 Abca1-201ENSMUST00000030010 10262 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Col8a2P25318 Epb41-201ENSMUST00000030739 6565 ntAPPRIS P3 TSL 5 BASIC6.32□□□□□ -1.4
Col8a2P25318 Osbpl9-201ENSMUST00000030288 2871 ntAPPRIS ALT1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Col8a2P25318 Zbtb18-201ENSMUST00000077225 4944 ntAPPRIS P3 BASIC6.32□□□□□ -1.4
Col8a2P25318 A130010J15Rik-203ENSMUST00000160822 3793 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
Col8a2P25318 Gria1-204ENSMUST00000151045 5361 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Col8a2P25318 Casp8-202ENSMUST00000165549 1917 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
Col8a2P25318 Syn3-201ENSMUST00000120638 2360 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Col8a2P25318 Mtm1-206ENSMUST00000114621 3257 ntTSL 5 BASIC6.32□□□□□ -1.4
Col8a2P25318 Trpm8-204ENSMUST00000171176 3723 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Col8a2P25318 Slc43a2-201ENSMUST00000042561 6891 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Col8a2P25318 CT009711.1-201ENSMUST00000223992 3040 ntBASIC6.32□□□□□ -1.4
Col8a2P25318 P2ry14-201ENSMUST00000065220 1672 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Col8a2P25318 Dis3l-202ENSMUST00000113890 3224 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Col8a2P25318 Zfp386-204ENSMUST00000183125 4779 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
Col8a2P25318 Gm5903-201ENSMUST00000121836 2325 ntBASIC6.32□□□□□ -1.4
Col8a2P25318 Cxcr6-201ENSMUST00000049810 1897 ntAPPRIS P2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Col8a2P25318 Gucy1b2-201ENSMUST00000022501 2711 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
Col8a2P25318 Rpe65-201ENSMUST00000029824 1602 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Col8a2P25318 Zmynd8-202ENSMUST00000088113 3757 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
Col8a2P25318 Recql5-201ENSMUST00000021097 3971 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Col8a2P25318 Olfr381-204ENSMUST00000215358 2658 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Col8a2P25318 Tmem52b-201ENSMUST00000032263 2877 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Col8a2P25318 Epha7-202ENSMUST00000080934 2880 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Col8a2P25318 Arhgap1-201ENSMUST00000090614 2866 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Col8a2P25318 Gm38359-201ENSMUST00000191884 2225 ntBASIC6.31□□□□□ -1.4
Col8a2P25318 Srcap-206ENSMUST00000186954 9345 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
Col8a2P25318 Arnt-205ENSMUST00000107161 4260 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Col8a2P25318 Zfp438-201ENSMUST00000063989 3209 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Col8a2P25318 Arhgap12-208ENSMUST00000182213 4162 ntAPPRIS ALT1 TSL 5 BASIC6.31□□□□□ -1.4
Col8a2P25318 Wdr72-201ENSMUST00000055879 5196 ntAPPRIS P2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Col8a2P25318 Skp2-202ENSMUST00000110585 6185 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Col8a2P25318 Gm44854-201ENSMUST00000205493 2340 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Col8a2P25318 Prkg1-201ENSMUST00000065067 3914 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Col8a2P25318 Entpd5-202ENSMUST00000072061 4858 ntTSL 5 BASIC6.31□□□□□ -1.4
Col8a2P25318 Gm6567-201ENSMUST00000205529 2095 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Col8a2P25318 4930447M23Rik-202ENSMUST00000141289 1483 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Col8a2P25318 Gm7086-201ENSMUST00000219083 1482 ntTSL 5 BASIC6.31□□□□□ -1.4
Col8a2P25318 Gm25276-201ENSMUST00000104300 124 ntBASIC6.31□□□□□ -1.4
Col8a2P25318 Dab1-201ENSMUST00000106826 996 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Col8a2P25318 Smim23-202ENSMUST00000109365 331 ntTSL 5 BASIC6.31□□□□□ -1.4
Col8a2P25318 Gm15778-201ENSMUST00000118469 608 ntBASIC6.31□□□□□ -1.4
Col8a2P25318 Gm16044-201ENSMUST00000118475 450 ntBASIC6.31□□□□□ -1.4
Col8a2P25318 Gm11928-201ENSMUST00000119323 437 ntBASIC6.31□□□□□ -1.4
Col8a2P25318 Gm15481-201ENSMUST00000120264 539 ntBASIC6.31□□□□□ -1.4
Col8a2P25318 Gm14826-201ENSMUST00000121284 901 ntBASIC6.31□□□□□ -1.4
Col8a2P25318 Gm11309-201ENSMUST00000127108 613 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Col8a2P25318 Olfr636-ps1-201ENSMUST00000134827 935 ntBASIC6.31□□□□□ -1.4
Col8a2P25318 Gm13857-202ENSMUST00000141091 617 ntTSL 3 BASIC6.31□□□□□ -1.4
Col8a2P25318 Gm12371-201ENSMUST00000144029 1091 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Col8a2P25318 BC016548-201ENSMUST00000144657 640 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Col8a2P25318 Tph1-205ENSMUST00000168335 578 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Col8a2P25318 Gm7502-201ENSMUST00000169235 733 ntBASIC6.31□□□□□ -1.4
Col8a2P25318 Mir5100-201ENSMUST00000174993 64 ntBASIC6.31□□□□□ -1.4
Col8a2P25318 Gm28119-201ENSMUST00000185538 298 ntTSL 5 BASIC6.31□□□□□ -1.4
Col8a2P25318 Rnf212-202ENSMUST00000196652 853 ntTSL 2 BASIC6.31□□□□□ -1.4
Col8a2P25318 4930568A13Rik-201ENSMUST00000199961 1061 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Col8a2P25318 Gm2505-201ENSMUST00000200413 825 ntBASIC6.31□□□□□ -1.4
Col8a2P25318 Gm8077-201ENSMUST00000209221 1024 ntBASIC6.31□□□□□ -1.4
Col8a2P25318 Gm18972-201ENSMUST00000218873 630 ntBASIC6.31□□□□□ -1.4
Col8a2P25318 Gm32899-201ENSMUST00000219694 207 ntBASIC6.31□□□□□ -1.4
Col8a2P25318 Gm4796-201ENSMUST00000219802 624 ntBASIC6.31□□□□□ -1.4
Col8a2P25318 Gcnt2-204ENSMUST00000223570 335 ntBASIC6.31□□□□□ -1.4
Col8a2P25318 AC110176.1-201ENSMUST00000226219 504 ntBASIC6.31□□□□□ -1.4
Col8a2P25318 AC154838.3-201ENSMUST00000228876 965 ntBASIC6.31□□□□□ -1.4
Col8a2P25318 Dbi-201ENSMUST00000027634 569 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Col8a2P25318 Gm1604a-201ENSMUST00000097422 781 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Col8a2P25318 Lig3-201ENSMUST00000021039 5957 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
Col8a2P25318 Olfr1388-202ENSMUST00000215226 3034 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Col8a2P25318 Tdrkh-201ENSMUST00000045245 2642 ntAPPRIS P2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Col8a2P25318 Vtcn1-201ENSMUST00000054791 2622 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Col8a2P25318 Wdr76-203ENSMUST00000110602 4170 ntAPPRIS P2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Col8a2P25318 Gm14244-201ENSMUST00000155688 2410 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Col8a2P25318 Elavl4-207ENSMUST00000106603 3761 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Col8a2P25318 Gm43422-201ENSMUST00000199780 3571 ntBASIC6.31□□□□□ -1.4
Col8a2P25318 Tenm1-201ENSMUST00000016294 8365 ntAPPRIS P2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Col8a2P25318 Mcm9-203ENSMUST00000219547 3168 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Col8a2P25318 Zfp488-201ENSMUST00000166737 4301 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Col8a2P25318 Kcnj15-201ENSMUST00000037154 5089 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Col8a2P25318 Gm28824-201ENSMUST00000187496 2167 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Col8a2P25318 Gm28948-201ENSMUST00000188447 2167 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Col8a2P25318 Gm29472-201ENSMUST00000188599 2167 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Col8a2P25318 Gm28561-201ENSMUST00000189366 2167 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Col8a2P25318 Gm28732-201ENSMUST00000189632 2167 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Col8a2P25318 Gm38136-201ENSMUST00000194775 2167 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Col8a2P25318 Gm38296-201ENSMUST00000195205 2167 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Col8a2P25318 Psmf1-201ENSMUST00000042452 3809 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Col8a2P25318 Gm42669-202ENSMUST00000160160 3080 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
Col8a2P25318 Sgo1-201ENSMUST00000024736 3628 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Col8a2P25318 Gm45512-201ENSMUST00000210432 1553 ntBASIC6.31□□□□□ -1.4
Col8a2P25318 Gm13821-201ENSMUST00000202029 3201 ntBASIC6.31□□□□□ -1.4
Col8a2P25318 Zbtb37-206ENSMUST00000172044 3883 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Col8a2P25318 Gpm6b-202ENSMUST00000112223 4764 ntAPPRIS ALT1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms