Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Trav9d-2-201ENSMUST00000178824 337 ntAPPRIS ALT2 BASIC6.78□□□□□ -1.32
P20040 Trav9n-2-201ENSMUST00000180097 337 ntAPPRIS ALT2 BASIC6.78□□□□□ -1.32
P20040 Mir8097-201ENSMUST00000185150 119 ntBASIC6.78□□□□□ -1.32
P20040 Gm8307-201ENSMUST00000187682 1150 ntBASIC6.78□□□□□ -1.32
P20040 Gm28548-201ENSMUST00000191599 409 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
P20040 Gm6123-201ENSMUST00000193658 1069 ntBASIC6.78□□□□□ -1.32
P20040 Olfr214-202ENSMUST00000203867 1255 ntAPPRIS P1 TSL 3 BASIC6.78□□□□□ -1.32
P20040 AC160112.1-201ENSMUST00000219139 714 ntBASIC6.78□□□□□ -1.32
P20040 Gm34574-202ENSMUST00000219433 1108 ntTSL 5 BASIC6.78□□□□□ -1.32
P20040 AC092710.1-201ENSMUST00000221005 192 ntBASIC6.78□□□□□ -1.32
P20040 AC123920.1-201ENSMUST00000221449 384 ntBASIC6.78□□□□□ -1.32
P20040 AC159205.7-201ENSMUST00000225988 692 ntBASIC6.78□□□□□ -1.32
P20040 AC126028.1-201ENSMUST00000226218 2123 ntBASIC6.78□□□□□ -1.32
P20040 Lyzl1-201ENSMUST00000025076 846 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
P20040 Ccdc150-201ENSMUST00000027128 3807 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
P20040 Olfr448-201ENSMUST00000058668 933 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
P20040 Klk1b3-201ENSMUST00000085450 889 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
P20040 Mir146b-201ENSMUST00000093619 109 ntBASIC6.78□□□□□ -1.32
P20040 Gcnt2-202ENSMUST00000069958 3929 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
P20040 Dnah10-201ENSMUST00000058440 14038 ntAPPRIS P2 TSL 5 BASIC6.78□□□□□ -1.32
P20040 Gm14546-201ENSMUST00000138275 1647 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
P20040 Gm9125-201ENSMUST00000178458 2233 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
P20040 Olfr975-202ENSMUST00000216647 2848 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
P20040 Zbtb18-212ENSMUST00000195612 3790 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
P20040 4930471M09Rik-202ENSMUST00000206475 1990 ntBASIC6.78□□□□□ -1.32
P20040 2810414N06Rik-201ENSMUST00000186444 1381 ntTSL 2 BASIC6.78□□□□□ -1.32
P20040 Fancd2os-201ENSMUST00000035870 1358 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
P20040 Skil-202ENSMUST00000117728 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
P20040 Synj2bp-204ENSMUST00000164431 3305 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
P20040 Gm37790-201ENSMUST00000193136 3346 ntBASIC6.78□□□□□ -1.32
P20040 Schip1-207ENSMUST00000182997 1557 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
P20040 Spta1-201ENSMUST00000027817 8406 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
P20040 Ank3-207ENSMUST00000181974 3751 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
P20040 Sorbs2-222ENSMUST00000141039 1699 ntTSL 5 BASIC6.77□□□□□ -1.32
P20040 Cps1-201ENSMUST00000027144 5555 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
P20040 AC164437.5-201ENSMUST00000227235 4414 ntBASIC6.77□□□□□ -1.33
P20040 Gm28583-201ENSMUST00000188903 2141 ntBASIC6.77□□□□□ -1.33
P20040 Gm38251-201ENSMUST00000192968 2575 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
P20040 1810018F18Rik-202ENSMUST00000189546 1447 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
P20040 Fndc3b-204ENSMUST00000195008 6886 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
P20040 Gm2244-201ENSMUST00000164372 1506 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
P20040 Gm28979-201ENSMUST00000190949 1540 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
P20040 AC154257.1-201ENSMUST00000224811 1525 ntBASIC6.77□□□□□ -1.33
P20040 Gm45470-201ENSMUST00000209685 7044 ntTSL 5 BASIC6.77□□□□□ -1.33
P20040 0610037L13Rik-212ENSMUST00000135454 2997 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
P20040 Tmem30c-201ENSMUST00000023434 2973 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
P20040 9330199G10Rik-201ENSMUST00000221601 2072 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
P20040 1110008L16Rik-205ENSMUST00000184766 2250 ntAPPRIS P2 TSL 5 BASIC6.77□□□□□ -1.33
P20040 Gm23706-201ENSMUST00000104369 82 ntBASIC6.77□□□□□ -1.33
P20040 Gm7785-201ENSMUST00000117121 892 ntBASIC6.77□□□□□ -1.33
P20040 Gm8688-201ENSMUST00000118240 969 ntBASIC6.77□□□□□ -1.33
P20040 Gm12687-201ENSMUST00000119752 706 ntBASIC6.77□□□□□ -1.33
P20040 Gm12727-201ENSMUST00000119885 359 ntBASIC6.77□□□□□ -1.33
P20040 Gm12599-201ENSMUST00000120534 792 ntBASIC6.77□□□□□ -1.33
P20040 Gm15006-201ENSMUST00000121419 1122 ntBASIC6.77□□□□□ -1.33
P20040 Gm14048-201ENSMUST00000121864 1268 ntBASIC6.77□□□□□ -1.33
P20040 Gm15928-201ENSMUST00000122455 280 ntBASIC6.77□□□□□ -1.33
P20040 Gm6689-201ENSMUST00000130905 481 ntBASIC6.77□□□□□ -1.33
P20040 Gm22562-201ENSMUST00000157334 111 ntBASIC6.77□□□□□ -1.33
P20040 Gm26407-201ENSMUST00000158504 307 ntBASIC6.77□□□□□ -1.33
P20040 S100a10-203ENSMUST00000170612 477 ntAPPRIS P1 TSL 3 BASIC6.77□□□□□ -1.33
P20040 Gm20638-201ENSMUST00000175796 550 ntTSL 5 BASIC6.77□□□□□ -1.33
P20040 4933439J24Rik-201ENSMUST00000200866 853 ntBASIC6.77□□□□□ -1.33
P20040 Gm4536-201ENSMUST00000209157 542 ntBASIC6.77□□□□□ -1.33
P20040 Gm45283-201ENSMUST00000210593 628 ntBASIC6.77□□□□□ -1.33
P20040 AC111092.1-201ENSMUST00000220181 411 ntTSL 3 BASIC6.77□□□□□ -1.33
P20040 Gpihbp1-201ENSMUST00000023243 825 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
P20040 Vpreb2-201ENSMUST00000075371 429 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
P20040 Dmrtc1c2-202ENSMUST00000087899 717 ntAPPRIS P3 TSL 5 BASIC6.77□□□□□ -1.33
P20040 Gm10805-201ENSMUST00000099710 399 ntBASIC6.77□□□□□ -1.33
P20040 Glyat-201ENSMUST00000044976 2822 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
P20040 Celf2-214ENSMUST00000170438 8856 ntTSL 5 BASIC6.77□□□□□ -1.33
P20040 Psg29-201ENSMUST00000075934 5445 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
P20040 Olfr97-204ENSMUST00000214622 1573 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
P20040 Olfr97-201ENSMUST00000073667 1555 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
P20040 Ssr3-201ENSMUST00000029414 2957 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
P20040 Xlr5b-202ENSMUST00000114518 1652 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
P20040 Xlr5a-204ENSMUST00000179600 1650 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
P20040 Xlr5a-201ENSMUST00000078574 1650 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
P20040 Vps39-202ENSMUST00000102501 4384 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
P20040 2310039L15Rik-202ENSMUST00000219492 3743 ntTSL 5 BASIC6.77□□□□□ -1.33
P20040 Itgae-201ENSMUST00000006101 3845 ntAPPRIS P4 TSL 1 (best) BASIC6.77□□□□□ -1.33
P20040 Gm43670-201ENSMUST00000199047 1767 ntBASIC6.77□□□□□ -1.33
P20040 Tnik-214ENSMUST00000162485 3918 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
P20040 Gm6101-201ENSMUST00000195384 1867 ntBASIC6.77□□□□□ -1.33
P20040 Cd247-208ENSMUST00000178336 2807 ntTSL 5 BASIC6.77□□□□□ -1.33
P20040 Vmn1r17-203ENSMUST00000228156 2090 ntAPPRIS ALT2 BASIC6.77□□□□□ -1.33
P20040 Gm28955-201ENSMUST00000188167 2166 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
P20040 Gm28509-201ENSMUST00000189428 2170 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
P20040 AC160863.4-201ENSMUST00000218099 1334 ntTSL 5 BASIC6.76□□□□□ -1.33
P20040 Jcad-201ENSMUST00000037029 6730 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
P20040 Lrrc3b-203ENSMUST00000223700 1426 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
P20040 Cpne4-203ENSMUST00000098443 1421 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
P20040 Olfr1183-202ENSMUST00000213115 8258 ntTSL 5 BASIC6.76□□□□□ -1.33
P20040 Ica1l-206ENSMUST00000191251 3415 ntAPPRIS P2 TSL 1 (best) BASIC6.76□□□□□ -1.33
P20040 Cd160-202ENSMUST00000107074 2590 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
P20040 Cntn5-204ENSMUST00000162484 3606 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
P20040 Gm16233-201ENSMUST00000136170 1623 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
P20040 Olfr1239-202ENSMUST00000216762 1643 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
P20040 Ulk4-209ENSMUST00000171923 4103 ntAPPRIS P2 TSL 5 BASIC6.76□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 63.4 ms