Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Gm17212-201ENSMUST00000166666 259 ntBASIC7.34□□□□□ -1.23
Col6a3E9PWQ3 Ighv2-9-1-201ENSMUST00000180013 369 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
Col6a3E9PWQ3 AC158750.1-201ENSMUST00000226163 634 ntBASIC7.34□□□□□ -1.23
Col6a3E9PWQ3 Prpf40a-208ENSMUST00000210789 3773 ntAPPRIS ALT2 TSL 5 BASIC7.34□□□□□ -1.23
Col6a3E9PWQ3 Gm43519-201ENSMUST00000197239 1872 ntBASIC7.34□□□□□ -1.23
Col6a3E9PWQ3 Gm12295-201ENSMUST00000128453 3189 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Col6a3E9PWQ3 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Col6a3E9PWQ3 4930431P03Rik-204ENSMUST00000228169 1967 ntBASIC7.34□□□□□ -1.24
Col6a3E9PWQ3 Arsj-201ENSMUST00000093976 3859 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.24
Col6a3E9PWQ3 Gm16568-201ENSMUST00000066038 1910 ntTSL 1 (best) BASIC7.34□□□□□ -1.24
Col6a3E9PWQ3 Sorbs1-202ENSMUST00000099467 2817 ntAPPRIS P4 TSL 5 BASIC7.34□□□□□ -1.24
Col6a3E9PWQ3 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC7.34□□□□□ -1.24
Col6a3E9PWQ3 Hmgn3-203ENSMUST00000185315 1391 ntAPPRIS ALT2 TSL 2 BASIC7.34□□□□□ -1.24
Col6a3E9PWQ3 Gm37446-201ENSMUST00000193015 4136 ntBASIC7.34□□□□□ -1.24
Col6a3E9PWQ3 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.24
Col6a3E9PWQ3 Gm9575-201ENSMUST00000122140 1339 ntBASIC7.34□□□□□ -1.24
Col6a3E9PWQ3 B430306N03Rik-201ENSMUST00000049614 3996 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.24
Col6a3E9PWQ3 Rpl36a-ps4-201ENSMUST00000121019 296 ntBASIC7.33□□□□□ -1.24
Col6a3E9PWQ3 Stau2-209ENSMUST00000145092 564 ntTSL 5 BASIC7.33□□□□□ -1.24
Col6a3E9PWQ3 Gm8999-201ENSMUST00000204951 969 ntBASIC7.33□□□□□ -1.24
Col6a3E9PWQ3 Gm31904-201ENSMUST00000219446 877 ntTSL 5 BASIC7.33□□□□□ -1.24
Col6a3E9PWQ3 AC164618.3-201ENSMUST00000224863 681 ntBASIC7.33□□□□□ -1.24
Col6a3E9PWQ3 Atf2-201ENSMUST00000055833 4210 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
Col6a3E9PWQ3 Utp14a-201ENSMUST00000080713 2507 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Col6a3E9PWQ3 Gm11242-201ENSMUST00000120103 2457 ntBASIC7.33□□□□□ -1.24
Col6a3E9PWQ3 Nudt7-202ENSMUST00000073521 3543 ntAPPRIS P3 TSL 1 (best) BASIC7.33□□□□□ -1.24
Col6a3E9PWQ3 Gm34184-201ENSMUST00000216477 2713 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Col6a3E9PWQ3 Ttc41-205ENSMUST00000219108 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.24
Col6a3E9PWQ3 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC7.33□□□□□ -1.24
Col6a3E9PWQ3 Olfr1124-202ENSMUST00000215909 2422 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
Col6a3E9PWQ3 Copg1-202ENSMUST00000113607 4140 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Col6a3E9PWQ3 Ak7-201ENSMUST00000040876 3099 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Col6a3E9PWQ3 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Col6a3E9PWQ3 Pum1-203ENSMUST00000097864 4017 ntAPPRIS ALT1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Col6a3E9PWQ3 Coro7-201ENSMUST00000038552 4296 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Col6a3E9PWQ3 Ccdc77-201ENSMUST00000032283 2610 ntAPPRIS P2 TSL 1 (best) BASIC7.33□□□□□ -1.24
Col6a3E9PWQ3 Zfp942-202ENSMUST00000091879 3265 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Col6a3E9PWQ3 Gm22372-201ENSMUST00000104589 136 ntBASIC7.33□□□□□ -1.24
Col6a3E9PWQ3 Olfr634-ps1-201ENSMUST00000119267 955 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
Col6a3E9PWQ3 Gm11848-201ENSMUST00000121207 973 ntBASIC7.33□□□□□ -1.24
Col6a3E9PWQ3 Rpa3-201ENSMUST00000012627 670 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Col6a3E9PWQ3 Slc25a5-ps-201ENSMUST00000162199 826 ntBASIC7.33□□□□□ -1.24
Col6a3E9PWQ3 Mir6975-201ENSMUST00000184879 61 ntBASIC7.33□□□□□ -1.24
Col6a3E9PWQ3 4833421G17Rik-201ENSMUST00000191704 844 ntBASIC7.33□□□□□ -1.24
Col6a3E9PWQ3 Gm8101-201ENSMUST00000192796 478 ntBASIC7.33□□□□□ -1.24
Col6a3E9PWQ3 Gm37705-201ENSMUST00000195111 577 ntTSL 5 BASIC7.33□□□□□ -1.24
Col6a3E9PWQ3 Gm36535-201ENSMUST00000198395 511 ntTSL 3 BASIC7.33□□□□□ -1.24
Col6a3E9PWQ3 Gm42652-201ENSMUST00000199073 614 ntBASIC7.33□□□□□ -1.24
Col6a3E9PWQ3 Gm44911-201ENSMUST00000208436 1062 ntBASIC7.33□□□□□ -1.24
Col6a3E9PWQ3 2700097O09Rik-201ENSMUST00000021406 1105 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Col6a3E9PWQ3 Lamb3-201ENSMUST00000016315 4056 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Col6a3E9PWQ3 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
Col6a3E9PWQ3 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Col6a3E9PWQ3 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Col6a3E9PWQ3 Gm45056-201ENSMUST00000208140 3462 ntTSL 5 BASIC7.33□□□□□ -1.24
Col6a3E9PWQ3 Tceal8-204ENSMUST00000163584 2358 ntAPPRIS P1 TSL 3 BASIC7.33□□□□□ -1.24
Col6a3E9PWQ3 Mak-201ENSMUST00000021792 3385 ntAPPRIS P3 TSL 1 (best) BASIC7.33□□□□□ -1.24
Col6a3E9PWQ3 Gm14529-201ENSMUST00000117894 406 ntBASIC7.33□□□□□ -1.24
Col6a3E9PWQ3 Gm15311-201ENSMUST00000119682 282 ntBASIC7.33□□□□□ -1.24
Col6a3E9PWQ3 Gm15305-201ENSMUST00000120354 288 ntBASIC7.33□□□□□ -1.24
Col6a3E9PWQ3 Defb28-201ENSMUST00000121912 397 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Col6a3E9PWQ3 Gm15265-201ENSMUST00000133494 551 ntTSL 2 BASIC7.33□□□□□ -1.24
Col6a3E9PWQ3 2610001J05Rik-204ENSMUST00000185361 767 ntAPPRIS P1 TSL 3 BASIC7.33□□□□□ -1.24
Col6a3E9PWQ3 Gm37974-201ENSMUST00000193668 220 ntTSL 3 BASIC7.33□□□□□ -1.24
Col6a3E9PWQ3 Gm18325-201ENSMUST00000203228 835 ntBASIC7.33□□□□□ -1.24
Col6a3E9PWQ3 Fabp2-201ENSMUST00000023820 965 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Col6a3E9PWQ3 Gm18796-201ENSMUST00000190440 1767 ntBASIC7.33□□□□□ -1.24
Col6a3E9PWQ3 AC125328.1-201ENSMUST00000226812 2265 ntBASIC7.33□□□□□ -1.24
Col6a3E9PWQ3 Topaz1-201ENSMUST00000178679 5030 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Col6a3E9PWQ3 Hspd1-ps3-201ENSMUST00000119713 1722 ntBASIC7.33□□□□□ -1.24
Col6a3E9PWQ3 Piwil4-203ENSMUST00000115644 3304 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
Col6a3E9PWQ3 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Col6a3E9PWQ3 Prom1-214ENSMUST00000197706 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.24
Col6a3E9PWQ3 AC155298.3-201ENSMUST00000225307 3220 ntBASIC7.32□□□□□ -1.24
Col6a3E9PWQ3 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Col6a3E9PWQ3 Olfr1294-202ENSMUST00000208675 1983 ntAPPRIS P1 TSL 2 BASIC7.32□□□□□ -1.24
Col6a3E9PWQ3 Mageb18-202ENSMUST00000113955 2163 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
Col6a3E9PWQ3 Atp10d-201ENSMUST00000094710 2365 ntTSL 5 BASIC7.32□□□□□ -1.24
Col6a3E9PWQ3 Lncenc1-202ENSMUST00000179324 2764 ntTSL 2 BASIC7.32□□□□□ -1.24
Col6a3E9PWQ3 Iglc2-201ENSMUST00000103749 606 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
Col6a3E9PWQ3 Gm15715-201ENSMUST00000118032 283 ntBASIC7.32□□□□□ -1.24
Col6a3E9PWQ3 Gm12631-201ENSMUST00000130576 637 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Col6a3E9PWQ3 Gm27295-201ENSMUST00000184264 153 ntBASIC7.32□□□□□ -1.24
Col6a3E9PWQ3 Gm43964-201ENSMUST00000203570 301 ntTSL 3 BASIC7.32□□□□□ -1.24
Col6a3E9PWQ3 D730003K21Rik-202ENSMUST00000217456 533 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Col6a3E9PWQ3 Gm31931-201ENSMUST00000219666 222 ntBASIC7.32□□□□□ -1.24
Col6a3E9PWQ3 Olfr734-201ENSMUST00000050928 1033 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
Col6a3E9PWQ3 Adgrg4-201ENSMUST00000096431 1137 ntTSL 2 BASIC7.32□□□□□ -1.24
Col6a3E9PWQ3 Orc3-202ENSMUST00000108142 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
Col6a3E9PWQ3 Atp2a1-201ENSMUST00000032974 3477 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Col6a3E9PWQ3 Zfp541-203ENSMUST00000210805 4084 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
Col6a3E9PWQ3 1700024J04Rik-201ENSMUST00000093146 1821 ntBASIC7.32□□□□□ -1.24
Col6a3E9PWQ3 Gm42678-201ENSMUST00000197163 2221 ntBASIC7.32□□□□□ -1.24
Col6a3E9PWQ3 Olfr686-203ENSMUST00000216143 2612 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
Col6a3E9PWQ3 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC7.32□□□□□ -1.24
Col6a3E9PWQ3 Uba7-201ENSMUST00000035216 3195 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Col6a3E9PWQ3 Olfr458-202ENSMUST00000216650 1799 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
Col6a3E9PWQ3 Gm11853-201ENSMUST00000119687 1384 ntBASIC7.32□□□□□ -1.24
Col6a3E9PWQ3 Gm37100-201ENSMUST00000193344 1353 ntBASIC7.32□□□□□ -1.24
Col6a3E9PWQ3 Gm36283-203ENSMUST00000220211 3732 ntTSL 5 BASIC7.32□□□□□ -1.24
Retrieved 100 of 76,532 protein–RNA pairs in 62.1 ms