Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Dgkb-201ENSMUST00000040500 6373 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Chmp2aQ9DB34 Tdrkh-204ENSMUST00000196606 2586 ntAPPRIS ALT2 TSL 5 BASIC7.98□□□□□ -1.13
Chmp2aQ9DB34 Gm7954-201ENSMUST00000164967 1403 ntAPPRIS P1 TSL 5 BASIC7.98□□□□□ -1.13
Chmp2aQ9DB34 Gm8082-201ENSMUST00000165349 1403 ntAPPRIS P1 TSL 5 BASIC7.98□□□□□ -1.13
Chmp2aQ9DB34 Vmn1r58-204ENSMUST00000228728 9991 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
Chmp2aQ9DB34 Zfp518b-201ENSMUST00000057258 6804 ntAPPRIS P1 TSL 3 BASIC7.98□□□□□ -1.13
Chmp2aQ9DB34 A130012E19Rik-201ENSMUST00000218674 3135 ntBASIC7.98□□□□□ -1.13
Chmp2aQ9DB34 Mbd5-202ENSMUST00000112745 6037 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Chmp2aQ9DB34 Gm26429-201ENSMUST00000104829 110 ntBASIC7.98□□□□□ -1.13
Chmp2aQ9DB34 Cisd3-202ENSMUST00000107584 546 ntAPPRIS ALT2 TSL 1 (best) BASIC7.98□□□□□ -1.13
Chmp2aQ9DB34 Gm11443-201ENSMUST00000118790 479 ntBASIC7.98□□□□□ -1.13
Chmp2aQ9DB34 Rps25-ps1-201ENSMUST00000119876 378 ntBASIC7.98□□□□□ -1.13
Chmp2aQ9DB34 Dnase1-202ENSMUST00000120009 1286 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Chmp2aQ9DB34 Gm9378-201ENSMUST00000120315 471 ntBASIC7.98□□□□□ -1.13
Chmp2aQ9DB34 Gm15049-201ENSMUST00000120474 463 ntBASIC7.98□□□□□ -1.13
Chmp2aQ9DB34 Gm15417-201ENSMUST00000126926 925 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Chmp2aQ9DB34 4933427D06Rik-202ENSMUST00000153517 522 ntTSL 5 BASIC7.98□□□□□ -1.13
Chmp2aQ9DB34 Gm23117-201ENSMUST00000158482 108 ntBASIC7.98□□□□□ -1.13
Chmp2aQ9DB34 Gm10804-202ENSMUST00000162565 867 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Chmp2aQ9DB34 Gm2951-201ENSMUST00000169447 490 ntBASIC7.98□□□□□ -1.13
Chmp2aQ9DB34 Gm7393-201ENSMUST00000172650 739 ntBASIC7.98□□□□□ -1.13
Chmp2aQ9DB34 Trav7n-6-201ENSMUST00000178100 381 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
Chmp2aQ9DB34 Gm26832-201ENSMUST00000181456 1282 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Chmp2aQ9DB34 Mir8095-201ENSMUST00000185103 129 ntBASIC7.98□□□□□ -1.13
Chmp2aQ9DB34 Gm29195-201ENSMUST00000189038 379 ntBASIC7.98□□□□□ -1.13
Chmp2aQ9DB34 Gm38305-201ENSMUST00000194825 223 ntBASIC7.98□□□□□ -1.13
Chmp2aQ9DB34 Gm4270-201ENSMUST00000209666 406 ntBASIC7.98□□□□□ -1.13
Chmp2aQ9DB34 AC154649.2-201ENSMUST00000228189 808 ntBASIC7.98□□□□□ -1.13
Chmp2aQ9DB34 Gstm2-202ENSMUST00000066530 854 ntTSL 3 BASIC7.98□□□□□ -1.13
Chmp2aQ9DB34 Vmn2r-ps99-202ENSMUST00000223517 2338 ntBASIC7.98□□□□□ -1.13
Chmp2aQ9DB34 Pds5b-202ENSMUST00000038900 7315 ntAPPRIS ALT2 TSL 5 BASIC7.98□□□□□ -1.13
Chmp2aQ9DB34 Gm44777-201ENSMUST00000205941 4052 ntBASIC7.98□□□□□ -1.13
Chmp2aQ9DB34 Olfr96-203ENSMUST00000214482 2161 ntAPPRIS P1 TSL 5 BASIC7.98□□□□□ -1.13
Chmp2aQ9DB34 Gm12258-201ENSMUST00000093768 2524 ntBASIC7.98□□□□□ -1.13
Chmp2aQ9DB34 Ctnna2-202ENSMUST00000159626 3908 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Chmp2aQ9DB34 Exoc4-201ENSMUST00000052266 4824 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Chmp2aQ9DB34 Parp8-201ENSMUST00000022239 3098 ntTSL 5 BASIC7.98□□□□□ -1.13
Chmp2aQ9DB34 Gm9929-201ENSMUST00000171747 1671 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Chmp2aQ9DB34 Olfr982-201ENSMUST00000054051 5576 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
Chmp2aQ9DB34 Vmn1r50-203ENSMUST00000226577 2240 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
Chmp2aQ9DB34 Senp6-203ENSMUST00000165607 3495 ntAPPRIS ALT2 TSL 1 (best) BASIC7.98□□□□□ -1.13
Chmp2aQ9DB34 1700027J07Rik-203ENSMUST00000217501 1884 ntTSL 5 BASIC7.98□□□□□ -1.13
Chmp2aQ9DB34 Gm2244-201ENSMUST00000164372 1506 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Chmp2aQ9DB34 Eml1-201ENSMUST00000054955 3879 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Chmp2aQ9DB34 2610203C20Rik-204ENSMUST00000181214 3525 ntTSL 5 BASIC7.98□□□□□ -1.13
Chmp2aQ9DB34 A230001M10Rik-203ENSMUST00000198712 1747 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Chmp2aQ9DB34 Oxtr-202ENSMUST00000204027 3721 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Chmp2aQ9DB34 Atp8b5-204ENSMUST00000107942 4463 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Chmp2aQ9DB34 Olfr517-202ENSMUST00000216500 2139 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
Chmp2aQ9DB34 Gm26967-201ENSMUST00000182878 2303 ntBASIC7.97□□□□□ -1.13
Chmp2aQ9DB34 Slc3a1-201ENSMUST00000024944 2307 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Chmp2aQ9DB34 Olfr859-202ENSMUST00000212540 9532 ntAPPRIS P1 TSL 3 BASIC7.97□□□□□ -1.13
Chmp2aQ9DB34 Birc2-202ENSMUST00000074246 3130 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Chmp2aQ9DB34 Ccdc60-201ENSMUST00000050178 3522 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Chmp2aQ9DB34 Gm5118-201ENSMUST00000184692 2203 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Chmp2aQ9DB34 Gm22022-201ENSMUST00000104355 127 ntBASIC7.97□□□□□ -1.13
Chmp2aQ9DB34 Paqr5-202ENSMUST00000113990 1073 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Chmp2aQ9DB34 Rps6-ps3-201ENSMUST00000118010 750 ntBASIC7.97□□□□□ -1.13
Chmp2aQ9DB34 Wdr83os-202ENSMUST00000140621 630 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Chmp2aQ9DB34 Gm22847-201ENSMUST00000157707 105 ntBASIC7.97□□□□□ -1.13
Chmp2aQ9DB34 Gm24738-201ENSMUST00000158856 123 ntBASIC7.97□□□□□ -1.13
Chmp2aQ9DB34 Gm7707-201ENSMUST00000165950 1156 ntBASIC7.97□□□□□ -1.13
Chmp2aQ9DB34 1700016L21Rik-202ENSMUST00000189139 629 ntTSL 3 BASIC7.97□□□□□ -1.13
Chmp2aQ9DB34 Gm36961-201ENSMUST00000191980 132 ntBASIC7.97□□□□□ -1.13
Chmp2aQ9DB34 Gm43815-201ENSMUST00000197676 990 ntBASIC7.97□□□□□ -1.13
Chmp2aQ9DB34 Tmigd3-204ENSMUST00000198080 832 ntAPPRIS P2 TSL 5 BASIC7.97□□□□□ -1.13
Chmp2aQ9DB34 Gm18131-201ENSMUST00000199241 449 ntBASIC7.97□□□□□ -1.13
Chmp2aQ9DB34 Gm36241-201ENSMUST00000201085 493 ntTSL 3 BASIC7.97□□□□□ -1.13
Chmp2aQ9DB34 Gm42965-201ENSMUST00000201254 250 ntBASIC7.97□□□□□ -1.13
Chmp2aQ9DB34 A930014E10Rik-201ENSMUST00000205115 546 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Chmp2aQ9DB34 Gm18207-201ENSMUST00000205486 526 ntBASIC7.97□□□□□ -1.13
Chmp2aQ9DB34 Gm44643-201ENSMUST00000208542 674 ntTSL 3 BASIC7.97□□□□□ -1.13
Chmp2aQ9DB34 E230032D23Rik-203ENSMUST00000208797 856 ntBASIC7.97□□□□□ -1.13
Chmp2aQ9DB34 Gm45145-203ENSMUST00000208872 958 ntTSL 5 BASIC7.97□□□□□ -1.13
Chmp2aQ9DB34 Gm5086-203ENSMUST00000210897 1136 ntTSL 5 BASIC7.97□□□□□ -1.13
Chmp2aQ9DB34 4930550C14Rik-204ENSMUST00000217318 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
Chmp2aQ9DB34 Gm4120-201ENSMUST00000220456 578 ntBASIC7.97□□□□□ -1.13
Chmp2aQ9DB34 AC163041.1-201ENSMUST00000221984 133 ntBASIC7.97□□□□□ -1.13
Chmp2aQ9DB34 Cinp-209ENSMUST00000222457 723 ntTSL 2 BASIC7.97□□□□□ -1.13
Chmp2aQ9DB34 AC130673.1-201ENSMUST00000227992 435 ntBASIC7.97□□□□□ -1.13
Chmp2aQ9DB34 Ssbp1-201ENSMUST00000031971 1063 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Chmp2aQ9DB34 Olfr125-201ENSMUST00000050255 1118 ntAPPRIS P1 BASIC7.97□□□□□ -1.13
Chmp2aQ9DB34 Gm5316-201ENSMUST00000050391 270 ntBASIC7.97□□□□□ -1.13
Chmp2aQ9DB34 Krtap8-1-201ENSMUST00000072280 579 ntAPPRIS P1 BASIC7.97□□□□□ -1.13
Chmp2aQ9DB34 Trappc3l-201ENSMUST00000095758 1185 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Chmp2aQ9DB34 Senp8-207ENSMUST00000217093 1663 ntAPPRIS P3 TSL 1 (best) BASIC7.97□□□□□ -1.13
Chmp2aQ9DB34 Pard3bos1-202ENSMUST00000138535 1878 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Chmp2aQ9DB34 Adgrg7-201ENSMUST00000023437 2698 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Chmp2aQ9DB34 Cd300lb-201ENSMUST00000106581 2880 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Chmp2aQ9DB34 Cfap161-202ENSMUST00000119134 2868 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
Chmp2aQ9DB34 Gm19938-201ENSMUST00000192692 3259 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Chmp2aQ9DB34 CT571245.1-201ENSMUST00000218642 3465 ntBASIC7.97□□□□□ -1.13
Chmp2aQ9DB34 Gm8204-201ENSMUST00000185696 2144 ntBASIC7.97□□□□□ -1.13
Chmp2aQ9DB34 St18-201ENSMUST00000043578 5862 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Chmp2aQ9DB34 Rnf141-209ENSMUST00000177236 4032 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Chmp2aQ9DB34 Gm43948-201ENSMUST00000203474 2376 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Chmp2aQ9DB34 Gm28824-201ENSMUST00000187496 2167 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Chmp2aQ9DB34 Gm28948-201ENSMUST00000188447 2167 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Chmp2aQ9DB34 Gm28561-201ENSMUST00000189366 2167 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Chmp2aQ9DB34 Gm28732-201ENSMUST00000189632 2167 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Retrieved 100 of 76,532 protein–RNA pairs in 71.8 ms