Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Gm28989-201ENSMUST00000187867 1613 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Clp1Q99LI9 Traf3-202ENSMUST00000060274 6896 ntTSL 5 BASIC8.72□□□□□ -1.01
Clp1Q99LI9 Grip1-207ENSMUST00000130387 2780 ntTSL 5 BASIC8.72□□□□□ -1.01
Clp1Q99LI9 Efcab6-207ENSMUST00000156187 5012 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Clp1Q99LI9 Gm44417-201ENSMUST00000203298 3359 ntBASIC8.72□□□□□ -1.01
Clp1Q99LI9 Gm45084-201ENSMUST00000207096 1957 ntBASIC8.72□□□□□ -1.01
Clp1Q99LI9 Map2-204ENSMUST00000114013 6258 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.01
Clp1Q99LI9 Rora-201ENSMUST00000034766 10878 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
Clp1Q99LI9 Bcas3-205ENSMUST00000108061 3810 ntAPPRIS ALT2 TSL 5 BASIC8.71□□□□□ -1.01
Clp1Q99LI9 Gm28813-201ENSMUST00000186293 1497 ntTSL 5 BASIC8.71□□□□□ -1.01
Clp1Q99LI9 Gm29324-202ENSMUST00000188242 1497 ntTSL 5 BASIC8.71□□□□□ -1.01
Clp1Q99LI9 Scoc-201ENSMUST00000081506 1791 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
Clp1Q99LI9 Cyp1a1-202ENSMUST00000216433 2697 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Clp1Q99LI9 Tbccd1-201ENSMUST00000004576 2702 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Clp1Q99LI9 Gm28187-201ENSMUST00000186885 2134 ntBASIC8.71□□□□□ -1.01
Clp1Q99LI9 1700123J17Rik-201ENSMUST00000206035 1805 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
Clp1Q99LI9 A930002I21Rik-201ENSMUST00000060946 1512 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
Clp1Q99LI9 Epn2-202ENSMUST00000108711 4287 ntAPPRIS ALT2 TSL 5 BASIC8.71□□□□□ -1.01
Clp1Q99LI9 D030047H15Rik-201ENSMUST00000148318 2536 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Clp1Q99LI9 Art4-201ENSMUST00000032341 2517 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Clp1Q99LI9 Zmynd8-201ENSMUST00000018050 4130 ntAPPRIS ALT2 TSL 5 BASIC8.71□□□□□ -1.02
Clp1Q99LI9 Tdpoz1-201ENSMUST00000094413 2237 ntAPPRIS P1 BASIC8.71□□□□□ -1.02
Clp1Q99LI9 Smco3-202ENSMUST00000111894 1069 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Clp1Q99LI9 Acbd7-201ENSMUST00000115089 531 ntAPPRIS P2 TSL 1 (best) BASIC8.71□□□□□ -1.02
Clp1Q99LI9 1700015F17Rik-201ENSMUST00000115447 710 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Clp1Q99LI9 Gm14295-201ENSMUST00000118012 1213 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Clp1Q99LI9 Gm12611-201ENSMUST00000119452 1037 ntBASIC8.71□□□□□ -1.02
Clp1Q99LI9 Gm12587-201ENSMUST00000120180 427 ntBASIC8.71□□□□□ -1.02
Clp1Q99LI9 Gm15584-201ENSMUST00000123231 759 ntTSL 2 BASIC8.71□□□□□ -1.02
Clp1Q99LI9 Gm12239-201ENSMUST00000134285 500 ntTSL 5 BASIC8.71□□□□□ -1.02
Clp1Q99LI9 Rps12-ps9-201ENSMUST00000139165 399 ntBASIC8.71□□□□□ -1.02
Clp1Q99LI9 1810062O18Rik-204ENSMUST00000141265 751 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Clp1Q99LI9 4930577H14Rik-201ENSMUST00000151367 790 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Clp1Q99LI9 Gm22424-201ENSMUST00000158527 87 ntBASIC8.71□□□□□ -1.02
Clp1Q99LI9 Gm23773-201ENSMUST00000158985 296 ntBASIC8.71□□□□□ -1.02
Clp1Q99LI9 Dxo-208ENSMUST00000174092 738 ntTSL 5 BASIC8.71□□□□□ -1.02
Clp1Q99LI9 Gm15251-201ENSMUST00000177947 883 ntBASIC8.71□□□□□ -1.02
Clp1Q99LI9 C030010L15Rik-201ENSMUST00000181465 715 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Clp1Q99LI9 Gm27762-201ENSMUST00000183417 109 ntBASIC8.71□□□□□ -1.02
Clp1Q99LI9 1110015O18Rik-201ENSMUST00000183632 570 ntTSL 3 BASIC8.71□□□□□ -1.02
Clp1Q99LI9 Gm28573-201ENSMUST00000187821 380 ntBASIC8.71□□□□□ -1.02
Clp1Q99LI9 Gm29496-201ENSMUST00000189854 693 ntBASIC8.71□□□□□ -1.02
Clp1Q99LI9 Gm29007-201ENSMUST00000190633 679 ntTSL 5 BASIC8.71□□□□□ -1.02
Clp1Q99LI9 Gm28400-201ENSMUST00000191332 380 ntBASIC8.71□□□□□ -1.02
Clp1Q99LI9 4930590L20Rik-201ENSMUST00000193820 553 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Clp1Q99LI9 Mir7230-201ENSMUST00000195977 56 ntBASIC8.71□□□□□ -1.02
Clp1Q99LI9 Gm43008-201ENSMUST00000202346 286 ntBASIC8.71□□□□□ -1.02
Clp1Q99LI9 Gm18559-201ENSMUST00000208249 604 ntBASIC8.71□□□□□ -1.02
Clp1Q99LI9 AL772397.1-201ENSMUST00000216707 606 ntBASIC8.71□□□□□ -1.02
Clp1Q99LI9 Lilrb4a-205ENSMUST00000217705 1142 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Clp1Q99LI9 AC153801.1-201ENSMUST00000217904 947 ntBASIC8.71□□□□□ -1.02
Clp1Q99LI9 AC118006.3-201ENSMUST00000223948 1176 ntBASIC8.71□□□□□ -1.02
Clp1Q99LI9 Ropn1-201ENSMUST00000023530 875 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Clp1Q99LI9 Cst11-201ENSMUST00000028934 615 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Clp1Q99LI9 Ssxb3-201ENSMUST00000089374 824 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Clp1Q99LI9 Gm6166-201ENSMUST00000098689 409 ntBASIC8.71□□□□□ -1.02
Clp1Q99LI9 Foxn3-201ENSMUST00000046859 7705 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Clp1Q99LI9 Tmcc1-209ENSMUST00000173548 1622 ntAPPRIS ALT2 TSL 5 BASIC8.71□□□□□ -1.02
Clp1Q99LI9 Gm32389-201ENSMUST00000209312 1621 ntTSL 3 BASIC8.71□□□□□ -1.02
Clp1Q99LI9 Cnga3-201ENSMUST00000027288 3554 ntAPPRIS P3 TSL 1 (best) BASIC8.71□□□□□ -1.02
Clp1Q99LI9 Hivep2-201ENSMUST00000015645 9763 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Clp1Q99LI9 Dlg2-201ENSMUST00000074273 5278 ntAPPRIS ALT2 TSL 5 BASIC8.71□□□□□ -1.02
Clp1Q99LI9 Fignl1-201ENSMUST00000047689 2961 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Clp1Q99LI9 Gm12051-201ENSMUST00000147771 1341 ntTSL 5 BASIC8.71□□□□□ -1.02
Clp1Q99LI9 Gm42942-201ENSMUST00000196086 1328 ntBASIC8.71□□□□□ -1.02
Clp1Q99LI9 Klhl32-203ENSMUST00000108214 5970 ntTSL 5 BASIC8.71□□□□□ -1.02
Clp1Q99LI9 P2ry14-201ENSMUST00000065220 1672 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Clp1Q99LI9 Ttll7-201ENSMUST00000037942 7394 ntAPPRIS P2 TSL 5 BASIC8.71□□□□□ -1.02
Clp1Q99LI9 Zbtb14-202ENSMUST00000112674 3743 ntAPPRIS P1 TSL 3 BASIC8.71□□□□□ -1.02
Clp1Q99LI9 4931406P16Rik-201ENSMUST00000085592 5798 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Clp1Q99LI9 Gbp9-202ENSMUST00000100961 2701 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Clp1Q99LI9 4933406K04Rik-203ENSMUST00000135423 1391 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Clp1Q99LI9 Gm44550-201ENSMUST00000207311 2058 ntBASIC8.71□□□□□ -1.02
Clp1Q99LI9 Gm26792-201ENSMUST00000180538 2799 ntTSL 5 BASIC8.71□□□□□ -1.02
Clp1Q99LI9 Kcna2-201ENSMUST00000038695 11582 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Clp1Q99LI9 Cblb-206ENSMUST00000227879 3866 ntAPPRIS ALT2 BASIC8.71□□□□□ -1.02
Clp1Q99LI9 Nat10-201ENSMUST00000028608 3879 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Clp1Q99LI9 Gm16465-201ENSMUST00000118585 1758 ntBASIC8.71□□□□□ -1.02
Clp1Q99LI9 Gm43910-201ENSMUST00000204561 3241 ntBASIC8.71□□□□□ -1.02
Clp1Q99LI9 Ces2g-201ENSMUST00000043183 2859 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Clp1Q99LI9 Tdrd3-205ENSMUST00000170865 2530 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.02
Clp1Q99LI9 Gm11548-201ENSMUST00000140203 2199 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Clp1Q99LI9 Cyp2c37-201ENSMUST00000049178 1824 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Clp1Q99LI9 Casc1-201ENSMUST00000060797 2572 ntAPPRIS P2 TSL 1 (best) BASIC8.7□□□□□ -1.02
Clp1Q99LI9 Gm37483-201ENSMUST00000194382 1484 ntBASIC8.7□□□□□ -1.02
Clp1Q99LI9 Pla2g6-210ENSMUST00000174021 3318 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Clp1Q99LI9 Gabpa-202ENSMUST00000114184 2202 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Clp1Q99LI9 Ccpg1-202ENSMUST00000085350 2969 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
Clp1Q99LI9 Tenm4-201ENSMUST00000107162 11021 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
Clp1Q99LI9 Gprasp2-211ENSMUST00000173804 3814 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Clp1Q99LI9 4932414J04Rik-201ENSMUST00000152483 3059 ntTSL 2 BASIC8.7□□□□□ -1.02
Clp1Q99LI9 AC122887.1-201ENSMUST00000219265 2722 ntBASIC8.7□□□□□ -1.02
Clp1Q99LI9 Ambra1-201ENSMUST00000045699 4690 ntTSL 5 BASIC8.7□□□□□ -1.02
Clp1Q99LI9 AL450321.1-201ENSMUST00000220600 3550 ntBASIC8.7□□□□□ -1.02
Clp1Q99LI9 Adgrl3-216ENSMUST00000121641 5151 ntAPPRIS ALT2 TSL 5 BASIC8.7□□□□□ -1.02
Clp1Q99LI9 Ldb2-201ENSMUST00000070748 2418 ntAPPRIS P3 TSL 1 (best) BASIC8.7□□□□□ -1.02
Clp1Q99LI9 Gm37078-201ENSMUST00000193314 2009 ntBASIC8.7□□□□□ -1.02
Clp1Q99LI9 Magi2-215ENSMUST00000208219 3266 ntTSL 5 BASIC8.7□□□□□ -1.02
Clp1Q99LI9 Extl2-202ENSMUST00000106501 2887 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Clp1Q99LI9 Cdkl4-201ENSMUST00000086545 2931 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Retrieved 100 of 76,532 protein–RNA pairs in 58.1 ms